TomoSeq data search

Data search

Results for MligTC455_36104

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_36104	822	17.12	Mlig455_050617	Neo: - Age: logFC(26M/2M)=0.368	CRBN	Mlig455_050617 {REF} {Length: 2043} {TRANSSPLICED} {Pfam: Yippee zinc-binding/DNA-binding /Mis18, centromere assembly [PF03226.16, score=32.4]} {Human: ENSG00000113851, CRBN, cereblon, [RH, Score=215, Expect=1e-63]} {Mouse: ENSMUSG00000005362, Crbn, cereblon, [RH, Score=210, Expect=9e-62]} {Dmel: FBgn0037780, ohgt, ohgata, [RH, Score=119, Expect=2e-28]} {Celegans: WBGene00010891, M18.6, [RH, Score=63.9, Expect=1e-10]} {Smed: dd_Smed_v6_9305_0_1, dd_Smed_v6_9305_0_1, [RH, Score=187, Expect=2e-52]} {RNA1509_21882, RNA1509_27296} {RNA1310_14349, RNA1509_21882, RNA1509_27296} {RNA1509_21882, RNA1509_27296, RNA815_13604}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_36104

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.281	4.325	0.20743	0.84622
RegionR2	0.136	4.325	0.74518	1.00000
RegionR3	-0.241	4.325	0.50075	0.99505
RegionR4	-0.158	4.325	0.67431	0.97007
RegionR5	0.188	4.325	0.54531	0.90733
RegionR6	0.374	4.325	0.27181	0.86118
RegionR7	0.267	4.325	0.54659	1.00000
RegionR8	0.716	4.325	0.16438	0.73354

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.066	4.325	0.96436	1.00000
RegenerationR2	0.036	4.325	0.91790	1.00000
RegenerationR3	0.081	4.325	0.83206	0.99147
RegenerationR4	0.062	4.325	0.86636	1.00000
RegenerationR5	-0.153	4.325	0.65059	0.93263
RegenerationR6	0.159	4.325	0.66948	0.90829
RegenerationBL	-1.26	4.325	0.01061	0.10412
RegenerationTP	-0.412	4.325	0.38154	0.81669

Genes with expression patterns similar to MligTC455_36104

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36104	822	17.12	Mlig455_050617	Neo: - Age: logFC(26M/2M)=0.368	CRBN	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050617 {REF} {Length: 2043} {TRANSSPLICED} {Pfam: Yippee zinc-binding/DNA-binding /Mis18, centromere assembly [PF03226.16, score=32.4]} {Human: ENSG00000113851, CRBN, cereblon, [RH, Score=215, Expect=1e-63]} {Mouse: ENSMUSG00000005362, Crbn, cereblon, [RH, Score=210, Expect=9e-62]} {Dmel: FBgn0037780, ohgt, ohgata, [RH, Score=119, Expect=2e-28]} {Celegans: WBGene00010891, M18.6, [RH, Score=63.9, Expect=1e-10]} {Smed: dd_Smed_v6_9305_0_1, dd_Smed_v6_9305_0_1, [RH, Score=187, Expect=2e-52]} {RNA1509_21882, RNA1509_27296} {RNA1310_14349, RNA1509_21882, RNA1509_27296} {RNA1509_21882, RNA1509_27296, RNA815_13604}
2.	MligTC455_15553	1843	38.4	Mlig455_031390	Neo: - Age: logFC(26M/2M)=0.339	DDX54	1.724	-	-	-	0.951	0.773	-	Mlig455_031390 {REF} {Length: 2554} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=164.3]; Helicase conserved C-terminal domain [PF00271.33, score=76.9]; Type III restriction enzyme, res subunit [PF04851.17, score=21.3]} {Human: ENSG00000123064, DDX54, DEAD-box helicase 54, [RH, Score=541, Expect=0.0]} {Mouse: ENSMUSG00000029599, Ddx54, DEAD (Asp-Glu-Ala-Asp) box polypeptide 54, [RH, Score=525, Expect=3e-176]} {Dmel: FBgn0052344, CG32344, [RH, Score=459, Expect=3e-151]} {Celegans: WBGene00022378, Y94H6A.5, [RH, Score=493, Expect=9e-165]} {Smed: dd_Smed_v6_3250_0_1, dd_Smed_v6_3250_0_1, [RH, Score=438, Expect=2e-144]} {RNA1509_10326, RNA1509_41254, RNA1509_4494} {RNA1310_6518, RNA1509_10326, RNA1509_41254, RNA1509_4494} {RNA1509_10326, RNA1509_41254, RNA1509_4494, RNA815_7893}
3.	MligTC455_33211	26864	559.66	Mlig455_009765, Mlig455_054915	Neo: Irradiation Age: - Region-specific R5: 1.515 Region-enriched R5: 1.358/0.00000	PRDX1	0.952	-	-	-	0.952	-	-	Mlig455_009765 {REF} {Length: 1206} {TRANSSPLICED} {Pfam: AhpC/TSA family [PF00578.23, score=129.0]; Redoxin [PF08534.12, score=62.2]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=55.1]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [RH, Score=299, Expect=5e-103]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [RH, Score=295, Expect=1e-101]; ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [RH, Score=282, Expect=2e-96]} {Dmel: FBgn0040309, Jafrac1, thioredoxin peroxidase 1, [RH, Score=280, Expect=8e-96]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [RH, Score=271, Expect=2e-92]} {Smed: dd_Smed_v6_7781_0_2, dd_Smed_v6_7781_0_2, [RH, Score=281, Expect=2e-96]} {RNA1509_3090} {RNA1310_28865.1, RNA1509_3090} {RNA1509_3090, RNA815_12816.1} Mlig455_054915 {REF} {Length: 990} {Pfam: AhpC/TSA family [PF00578.23, score=129.0]; Redoxin [PF08534.12, score=62.2]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=55.1]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [RH, Score=299, Expect=5e-103]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [RH, Score=295, Expect=1e-101]; ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [RH, Score=282, Expect=2e-96]} {Dmel: FBgn0040309, Jafrac1, thioredoxin peroxidase 1, [RH, Score=280, Expect=8e-96]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [RH, Score=271, Expect=2e-92]} {Smed: dd_Smed_v6_7781_0_2, dd_Smed_v6_7781_0_2, [RH, Score=281, Expect=2e-96]} {RNA1509_2818, RNA1509_3090} {RNA1310_28865.2, RNA1509_2818} {RNA1509_2818, RNA815_12816.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_36104

822

17.12

Mlig455_050617

Neo: -

Age: logFC(26M/2M)=0.368

CRBN

1.000

MligTC455_15553

1843

38.4

Mlig455_031390

Neo: -

Age: logFC(26M/2M)=0.339

DDX54

1.724

0.951

0.773

Mlig455_031390 {REF} {Length: 2554} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=164.3]; Helicase conserved C-terminal domain [PF00271.33, score=76.9]; Type III restriction enzyme, res subunit [PF04851.17, score=21.3]} {Human: ENSG00000123064, DDX54, DEAD-box helicase 54, [RH, Score=541, Expect=0.0]} {Mouse: ENSMUSG00000029599, Ddx54, DEAD (Asp-Glu-Ala-Asp) box polypeptide 54, [RH, Score=525, Expect=3e-176]} {Dmel: FBgn0052344, CG32344, [RH, Score=459, Expect=3e-151]} {Celegans: WBGene00022378, Y94H6A.5, [RH, Score=493, Expect=9e-165]} {Smed: dd_Smed_v6_3250_0_1, dd_Smed_v6_3250_0_1, [RH, Score=438, Expect=2e-144]} {RNA1509_10326, RNA1509_41254, RNA1509_4494} {RNA1310_6518, RNA1509_10326, RNA1509_41254, RNA1509_4494} {RNA1509_10326, RNA1509_41254, RNA1509_4494, RNA815_7893}

MligTC455_33211

26864

559.66

Mlig455_009765, Mlig455_054915

Neo: Irradiation

Age: -

Region-specific R5: 1.515

Region-enriched R5: 1.358/0.00000

PRDX1

0.952

Mlig455_009765 {REF} {Length: 1206} {TRANSSPLICED} {Pfam: AhpC/TSA family [PF00578.23, score=129.0]; Redoxin [PF08534.12, score=62.2]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=55.1]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [RH, Score=299, Expect=5e-103]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [RH, Score=295, Expect=1e-101]; ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [RH, Score=282, Expect=2e-96]} {Dmel: FBgn0040309, Jafrac1, thioredoxin peroxidase 1, [RH, Score=280, Expect=8e-96]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [RH, Score=271, Expect=2e-92]} {Smed: dd_Smed_v6_7781_0_2, dd_Smed_v6_7781_0_2, [RH, Score=281, Expect=2e-96]} {RNA1509_3090} {RNA1310_28865.1, RNA1509_3090} {RNA1509_3090, RNA815_12816.1}

Mlig455_054915 {REF} {Length: 990} {Pfam: AhpC/TSA family [PF00578.23, score=129.0]; Redoxin [PF08534.12, score=62.2]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=55.1]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [RH, Score=299, Expect=5e-103]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [RH, Score=295, Expect=1e-101]; ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [RH, Score=282, Expect=2e-96]} {Dmel: FBgn0040309, Jafrac1, thioredoxin peroxidase 1, [RH, Score=280, Expect=8e-96]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [RH, Score=271, Expect=2e-92]} {Smed: dd_Smed_v6_7781_0_2, dd_Smed_v6_7781_0_2, [RH, Score=281, Expect=2e-96]} {RNA1509_2818, RNA1509_3090} {RNA1310_28865.2, RNA1509_2818} {RNA1509_2818, RNA815_12816.1}