TomoSeq data search

Data search

Results for MligTC455_36133

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_36133	193	4.03	Mlig455_016028, Mlig455_054950, Mlig455_054963	Neo: - Age: -	LGSN	Mlig455_016028 {REF} {Length: 1758} {Pfam: Glutamine synthetase, catalytic domain [PF00120.26, score=132.8]} {Human: ENSG00000146166, LGSN, lengsin, lens protein with glutamine synthetase domain, [Score=113, Expect=2e-26]} {Mouse: ENSMUSG00000050217, Lgsn, lengsin, lens protein with glutamine synthetase domain, [Score=98.2, Expect=1e-21]} {Smed: dd_Smed_v6_9076_0_1, dd_Smed_v6_9076_0_1, [Score=169, Expect=1e-47]} {RNA1509_60099} {RNA1310_19740, RNA1509_60099} {RNA1509_60099, RNA815_20000} Mlig455_054950 {REF} {Length: 1520} {Pfam: Glutamine synthetase, catalytic domain [PF00120.26, score=131.2]} {Human: ENSG00000146166, LGSN, lengsin, lens protein with glutamine synthetase domain, [Score=92.0, Expect=2e-19]} {Mouse: ENSMUSG00000050217, Lgsn, lengsin, lens protein with glutamine synthetase domain, [Score=79.0, Expect=2e-15]} {Smed: dd_Smed_v6_9076_0_1, dd_Smed_v6_9076_0_1, [Score=151, Expect=4e-41]} {RNA1509_60099} {RNA1310_19740} {RNA815_25841} Mlig455_054963 {REF} {Length: 1608} {Pfam: Glutamine synthetase, catalytic domain [PF00120.26, score=112.8]} {Human: ENSG00000146166, LGSN, lengsin, lens protein with glutamine synthetase domain, [Score=95.9, Expect=8e-21]} {Mouse: ENSMUSG00000050217, Lgsn, lengsin, lens protein with glutamine synthetase domain, [Score=75.1, Expect=3e-14]} {Smed: dd_Smed_v6_9076_0_1, dd_Smed_v6_9076_0_1, [Score=141, Expect=1e-37]} {RNA1509_60099} {RNA1310_19740} {RNA815_25841}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36133

193

4.03

Mlig455_016028, Mlig455_054950, Mlig455_054963

Neo: -

Age: -

LGSN

Mlig455_016028 {REF} {Length: 1758} {Pfam: Glutamine synthetase, catalytic domain [PF00120.26, score=132.8]} {Human: ENSG00000146166, LGSN, lengsin, lens protein with glutamine synthetase domain, [Score=113, Expect=2e-26]} {Mouse: ENSMUSG00000050217, Lgsn, lengsin, lens protein with glutamine synthetase domain, [Score=98.2, Expect=1e-21]} {Smed: dd_Smed_v6_9076_0_1, dd_Smed_v6_9076_0_1, [Score=169, Expect=1e-47]} {RNA1509_60099} {RNA1310_19740, RNA1509_60099} {RNA1509_60099, RNA815_20000}

Mlig455_054950 {REF} {Length: 1520} {Pfam: Glutamine synthetase, catalytic domain [PF00120.26, score=131.2]} {Human: ENSG00000146166, LGSN, lengsin, lens protein with glutamine synthetase domain, [Score=92.0, Expect=2e-19]} {Mouse: ENSMUSG00000050217, Lgsn, lengsin, lens protein with glutamine synthetase domain, [Score=79.0, Expect=2e-15]} {Smed: dd_Smed_v6_9076_0_1, dd_Smed_v6_9076_0_1, [Score=151, Expect=4e-41]} {RNA1509_60099} {RNA1310_19740} {RNA815_25841}

Mlig455_054963 {REF} {Length: 1608} {Pfam: Glutamine synthetase, catalytic domain [PF00120.26, score=112.8]} {Human: ENSG00000146166, LGSN, lengsin, lens protein with glutamine synthetase domain, [Score=95.9, Expect=8e-21]} {Mouse: ENSMUSG00000050217, Lgsn, lengsin, lens protein with glutamine synthetase domain, [Score=75.1, Expect=3e-14]} {Smed: dd_Smed_v6_9076_0_1, dd_Smed_v6_9076_0_1, [Score=141, Expect=1e-37]} {RNA1509_60099} {RNA1310_19740} {RNA815_25841}

Cumulative graph for MligTC455_36133

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.53	2.62	0.75354	1.00000
RegionR2	-0.15	2.62	0.83720	1.00000
RegionR3	0.127	2.62	0.83644	1.00000
RegionR4	-0.068	2.62	0.92493	1.00000
RegionR5	-0.148	2.62	0.80422	1.00000
RegionR6	0.288	2.62	0.64295	1.00000
RegionR7	0.205	2.62	0.80756	1.00000
RegionR8	-0.783	2.62	0.56540	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.487	2.62	0.19066	0.93000
RegenerationR2	-0.783	2.62	0.19183	0.63576
RegenerationR3	0.05	2.62	0.93922	1.00000
RegenerationR4	0.681	2.62	0.28757	0.73233
RegenerationR5	-0.494	2.62	0.43585	0.82189
RegenerationR6	0.27	2.62	0.66824	0.90793
RegenerationBL	-1.777	2.62	0.12050	0.41190
RegenerationTP	0.274	2.62	0.78512	1.00000

Genes with expression patterns similar to MligTC455_36133

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36133	193	4.03	Mlig455_016028, Mlig455_054950, Mlig455_054963	Neo: - Age: -	LGSN	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016028 {REF} {Length: 1758} {Pfam: Glutamine synthetase, catalytic domain [PF00120.26, score=132.8]} {Human: ENSG00000146166, LGSN, lengsin, lens protein with glutamine synthetase domain, [Score=113, Expect=2e-26]} {Mouse: ENSMUSG00000050217, Lgsn, lengsin, lens protein with glutamine synthetase domain, [Score=98.2, Expect=1e-21]} {Smed: dd_Smed_v6_9076_0_1, dd_Smed_v6_9076_0_1, [Score=169, Expect=1e-47]} {RNA1509_60099} {RNA1310_19740, RNA1509_60099} {RNA1509_60099, RNA815_20000} Mlig455_054950 {REF} {Length: 1520} {Pfam: Glutamine synthetase, catalytic domain [PF00120.26, score=131.2]} {Human: ENSG00000146166, LGSN, lengsin, lens protein with glutamine synthetase domain, [Score=92.0, Expect=2e-19]} {Mouse: ENSMUSG00000050217, Lgsn, lengsin, lens protein with glutamine synthetase domain, [Score=79.0, Expect=2e-15]} {Smed: dd_Smed_v6_9076_0_1, dd_Smed_v6_9076_0_1, [Score=151, Expect=4e-41]} {RNA1509_60099} {RNA1310_19740} {RNA815_25841} Mlig455_054963 {REF} {Length: 1608} {Pfam: Glutamine synthetase, catalytic domain [PF00120.26, score=112.8]} {Human: ENSG00000146166, LGSN, lengsin, lens protein with glutamine synthetase domain, [Score=95.9, Expect=8e-21]} {Mouse: ENSMUSG00000050217, Lgsn, lengsin, lens protein with glutamine synthetase domain, [Score=75.1, Expect=3e-14]} {Smed: dd_Smed_v6_9076_0_1, dd_Smed_v6_9076_0_1, [Score=141, Expect=1e-37]} {RNA1509_60099} {RNA1310_19740} {RNA815_25841}
2.	MligTC455_25977	259	5.39	Mlig455_009179	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_009179 {REF} {Length: 4064} {RNA1509_19384} {RNA1310_17198.1} {RNA815_5584.1}
3.	MligTC455_22462	198	4.12	Mlig455_066858	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_066858 {REF} {Length: 1973} {RNA1509_45595} {RNA1310_70696} {RNA815_7856.3}
4.	MligTC455_52468	516	10.76	Mlig455_064232	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.559	C11orf1	0.951	-	-	-	-	0.951	-	Mlig455_064232 {REF} {Length: 1198} {Pfam: Protein of unknown function (DUF1143) [PF06608.13, score=55.2]} {Human: ENSG00000137720, C11orf1, chromosome 11 open reading frame 1, [RH, Score=52.0, Expect=4e-09]} {Mouse: ENSMUSG00000037971, 1110032A03Rik, RIKEN cDNA 1110032A03 gene, [RH, Score=53.1, Expect=3e-09]} {RNA1509_29539} {RNA1310_48982, RNA1509_29539} {RNA1509_29539, RNA815_26980.2}