TomoSeq data search

Data search

Results for MligTC455_36143

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_36143	448	9.34	Mlig455_034255	Neo: - Age: Down-Down-Up		Mlig455_034255 {REF} {Length: 3525} {RNA1509_44794, RNA1509_8683} {RNA1310_4014, RNA1509_44794} {RNA1509_44794, RNA815_1189.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_36143

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.382	3.629	0.15887	0.77872
RegionR2	0.816	3.629	0.14944	0.48270
RegionR3	1.162	3.629	0.00924	0.14578
RegionR4	0.278	3.629	0.58157	0.89785
RegionR5	0.964	3.629	0.02066	0.09933
RegionR6	0.92	3.629	0.05477	0.43960
RegionR7	0.342	3.629	0.59949	1.00000
RegionR8	-2.1	3.629	0.07694	0.52881

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.286	3.629	0.25721	0.96756
RegenerationR2	0.084	3.629	0.81705	0.99442
RegenerationR3	0.078	3.629	0.84425	0.99605
RegenerationR4	0.328	3.629	0.43909	0.83644
RegenerationR5	0.35	3.629	0.33081	0.75221
RegenerationR6	0.67	3.629	0.09789	0.38917
RegenerationBL	0.386	3.629	0.58851	0.93851
RegenerationTP	0.764	3.629	0.37800	0.81333

Genes with expression patterns similar to MligTC455_36143

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36143	448	9.34	Mlig455_034255	Neo: - Age: Down-Down-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_034255 {REF} {Length: 3525} {RNA1509_44794, RNA1509_8683} {RNA1310_4014, RNA1509_44794} {RNA1509_44794, RNA815_1189.1}
2.	MligTC455_42860	266	5.54	Mlig455_063583	Neo: - Age: Down-Down-Up	MRPL4	0.963	-	-	-	-	-	0.963	Mlig455_063583 {REF} {Length: 2129} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=113.5]} {Human: ENSG00000105364, MRPL4, mitochondrial ribosomal protein L4, [RH, Score=175, Expect=5e-52]} {Mouse: ENSMUSG00000003299, Mrpl4, mitochondrial ribosomal protein L4, [RH, Score=177, Expect=3e-53]} {Dmel: FBgn0001995, mRpL4, mitochondrial ribosomal protein L4, [RH, Score=206, Expect=2e-64]} {Celegans: WBGene00020717, mrpl-4, Mitochondrial Ribosomal Protein, Large, [RH, Score=176, Expect=6e-53]} {Smed: dd_Smed_v6_4353_0_1, dd_Smed_v6_4353_0_1, [RH, Score=242, Expect=2e-78]} {RNA1509_10411} {RNA1310_28032, RNA1509_10411} {RNA1509_10411, RNA815_15145}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_36143

448

9.34

Mlig455_034255

Neo: -

Age: Down-Down-Up

1.000

Mlig455_034255 {REF} {Length: 3525} {RNA1509_44794, RNA1509_8683} {RNA1310_4014, RNA1509_44794} {RNA1509_44794, RNA815_1189.1}

MligTC455_42860

266

5.54

Mlig455_063583

Neo: -

Age: Down-Down-Up

MRPL4

0.963

Mlig455_063583 {REF} {Length: 2129} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=113.5]} {Human: ENSG00000105364, MRPL4, mitochondrial ribosomal protein L4, [RH, Score=175, Expect=5e-52]} {Mouse: ENSMUSG00000003299, Mrpl4, mitochondrial ribosomal protein L4, [RH, Score=177, Expect=3e-53]} {Dmel: FBgn0001995, mRpL4, mitochondrial ribosomal protein L4, [RH, Score=206, Expect=2e-64]} {Celegans: WBGene00020717, mrpl-4, Mitochondrial Ribosomal Protein, Large, [RH, Score=176, Expect=6e-53]} {Smed: dd_Smed_v6_4353_0_1, dd_Smed_v6_4353_0_1, [RH, Score=242, Expect=2e-78]} {RNA1509_10411} {RNA1310_28032, RNA1509_10411} {RNA1509_10411, RNA815_15145}