Data search
Results for MligTC455_36213
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36213 | 959 | 19.97 | Mlig455_064473 | Neo: - Age: - |
RNF157 | Mlig455_064473 {REF} {Length: 2039} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=51.3]; Prokaryotic RING finger family 4 [PF14447.8, score=30.1]; Ring finger domain [PF13639.8, score=19.9]} {Human: ENSG00000141576, RNF157, ring finger protein 157, [RH, Score=181, Expect=5e-49]; ENSG00000102858, MGRN1, mahogunin ring finger 1, [RH, Score=179, Expect=2e-49]} {Mouse: ENSMUSG00000052949, Rnf157, ring finger protein 157, [RH, Score=177, Expect=4e-48]; ENSMUSG00000022517, Mgrn1, mahogunin, ring finger 1, [RH, Score=175, Expect=3e-48]} {Dmel: FBgn0030514, CG9941, [RH, Score=190, Expect=3e-52]} {Celegans: WBGene00007529, C11H1.3, [RH, Score=159, Expect=2e-42]} {Smed: dd_Smed_v6_9091_0_1, dd_Smed_v6_9091_0_1, [RH, Score=102, Expect=8e-24]} {RNA1509_36388, RNA1509_40280, RNA1509_51509} {RNA1310_13276, RNA1509_36388, RNA1509_40280, RNA1509_51509} {RNA1509_36388, RNA1509_40280, RNA1509_51509, RNA815_40225} |
Cumulative graph for MligTC455_36213
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.305 | 4.612 | 0.71329 | 1.00000 | |
| RegionR2 | 0.104 | 4.612 | 0.78308 | 1.00000 | |
| RegionR3 | -0.572 | 4.612 | 0.06818 | 0.46145 | |
| RegionR4 | -1.098 | 4.612 | 0.00131 | 0.01289 | |
| RegionR5 | 0.805 | 4.612 | 0.00077 | 0.00830 | |
| RegionR6 | -0.036 | 4.612 | 0.90456 | 1.00000 | |
| RegionR7 | 0.598 | 4.612 | 0.12269 | 0.66080 | |
| RegionR8 | 0.503 | 4.612 | 0.33967 | 0.97367 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.799 | 4.612 | 0.02907 | 0.62198 | |
| RegenerationR2 | 0.069 | 4.612 | 0.81692 | 0.99442 | |
| RegenerationR3 | 0.268 | 4.612 | 0.43998 | 0.82726 | |
| RegenerationR4 | 0.374 | 4.612 | 0.25693 | 0.70475 | |
| RegenerationR5 | -0.188 | 4.612 | 0.49280 | 0.85467 | |
| RegenerationR6 | -0.045 | 4.612 | 0.89359 | 1.00000 | |
| RegenerationBL | 0.066 | 4.612 | 0.86728 | 1.00000 | |
| RegenerationTP | -0.241 | 4.612 | 0.58037 | 0.95003 |
Genes with expression patterns similar to MligTC455_36213
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36213 | 959 | 19.97 | Mlig455_064473 | Neo: - Age: - |
RNF157 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_064473 {REF} {Length: 2039} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=51.3]; Prokaryotic RING finger family 4 [PF14447.8, score=30.1]; Ring finger domain [PF13639.8, score=19.9]} {Human: ENSG00000141576, RNF157, ring finger protein 157, [RH, Score=181, Expect=5e-49]; ENSG00000102858, MGRN1, mahogunin ring finger 1, [RH, Score=179, Expect=2e-49]} {Mouse: ENSMUSG00000052949, Rnf157, ring finger protein 157, [RH, Score=177, Expect=4e-48]; ENSMUSG00000022517, Mgrn1, mahogunin, ring finger 1, [RH, Score=175, Expect=3e-48]} {Dmel: FBgn0030514, CG9941, [RH, Score=190, Expect=3e-52]} {Celegans: WBGene00007529, C11H1.3, [RH, Score=159, Expect=2e-42]} {Smed: dd_Smed_v6_9091_0_1, dd_Smed_v6_9091_0_1, [RH, Score=102, Expect=8e-24]} {RNA1509_36388, RNA1509_40280, RNA1509_51509} {RNA1310_13276, RNA1509_36388, RNA1509_40280, RNA1509_51509} {RNA1509_36388, RNA1509_40280, RNA1509_51509, RNA815_40225} |
| 2. | MligTC455_31587 | 246 | 5.12 | Mlig455_061296 | Neo: Irradiation Age: - Region-enriched R5: 2.189/0.00183 |
1.798 | - | - | - | - | 0.844 | 0.954 | Mlig455_061296 {REF} {Length: 3275} {TRANSSPLICED} {RNA1509_28161} {RNA1310_8643, RNA1509_28161} {RNA1509_28161, RNA815_2213} | |
| 3. | MligTC455_19636 | 221 | 4.6 | Mlig455_015260 | Neo: - Age: - Region-enriched R5: 3.380/0.00000 |
0.971 | - | - | - | - | - | 0.971 | Mlig455_015260 {REF} {Length: 894} {TRANSSPLICED} {RNA1509_26653} {RNA1310_17584.2, RNA1509_26653} {RNA1509_26653, RNA815_20935.3} | |
| 4. | MligTC455_26712 | 375 | 7.82 | Mlig455_031611 | Neo: Int S/G2/M Age: - |
PNLDC1 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_031611 {REF} {Length: 3355} {TRANSSPLICED} {Pfam: CAF1 family ribonuclease [PF04857.22, score=211.9]} {Human: ENSG00000146453, PNLDC1, PARN like, ribonuclease domain containing 1, [RH, Score=184, Expect=1e-50]} {Mouse: ENSMUSG00000073460, Pnldc1, poly(A)-specific ribonuclease (PARN)-like domain containing 1, [RH, Score=188, Expect=4e-52]} {Celegans: WBGene00010734, parn-1, 3'-5' exoribonuclease parn-1, [RH, Score=86.7, Expect=1e-17]} {Smed: dd_Smed_v6_7361_0_1, dd_Smed_v6_7361_0_1, [RH, Score=174, Expect=7e-47]} {RNA1509_21738} {RNA1310_4936.1, RNA1509_21738} {RNA1509_21738, RNA815_10185} |
| 5. | MligTC455_49625 | 1156 | 24.09 | Mlig455_060365 | Neo: - Age: - |
ZFR2 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_060365 {REF} {Length: 2416} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=73.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=37.3]; SF3a60/Prp9 C-terminal [PF11931.10, score=24.3]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=20.2]} {Human: ENSG00000105278, ZFR2, zinc finger RNA binding protein 2, [Score=51.6, Expect=2e-06]; ENSG00000161642, ZNF385A, zinc finger protein 385A, [Score=50.1, Expect=7e-06]} {Mouse: ENSMUSG00000000552, Zfp385a, zinc finger protein 385A, [Score=50.4, Expect=4e-06]} {RNA1509_54420} {RNA1310_18764} {RNA815_3566} |
| 6. | MligTC455_54000 | 766 | 15.96 | Mlig455_007125 | Neo: Int S/G2/M Age: Down-Up-Up |
0.951 | - | - | - | - | - | 0.951 | Mlig455_007125 {REF} {Length: 1572} {TRANSSPLICED} {RNA1509_12669} {RNA1310_1009.1, RNA1509_12669} {RNA1509_12669, RNA815_15067} |
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