TomoSeq data search

Data search

Results for MligTC455_36224

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_36224	324	6.74	Mlig455_028910	Neo: - Age: Up-Down-Up, logFC(26M/2M)=2.098		Mlig455_028910 {REF} {Length: 16518} {RNA1509_4302} {RNA1310_110} {RNA815_3071}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_36224

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.484	3.214	1.00000	1.00000
RegionR2	0.249	3.214	0.72352	1.00000
RegionR3	0.631	3.214	0.56575	1.00000
RegionR4	0.958	3.214	0.41354	0.74062
RegionR5	1.499	3.214	0.17057	0.43982
RegionR6	0.387	3.214	0.65056	1.00000
RegionR7	1.099	3.214	0.50622	1.00000
RegionR8	-2.339	3.214	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.757	3.214	0.22785	0.95871
RegenerationR2	2.322	3.214	0.00829	0.14532
RegenerationR3	2.398	3.214	0.01089	0.19064
RegenerationR4	2.068	3.214	0.02406	0.24824
RegenerationR5	0.981	3.214	0.23184	0.66514
RegenerationR6	2.855	3.214	0.00218	0.05319
RegenerationBL	3.382	3.214	0.00971	0.09900
RegenerationTP	3.884	3.214	0.02787	0.28166

Genes with expression patterns similar to MligTC455_36224

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36224	324	6.74	Mlig455_028910	Neo: - Age: Up-Down-Up, logFC(26M/2M)=2.098		5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_028910 {REF} {Length: 16518} {RNA1509_4302} {RNA1310_110} {RNA815_3071}
2.	MligTC455_06259	68	1.41	Mlig455_010082, Mlig455_063243	Neo: - Age: Down-Up-Down Region-enriched R8: 4.096/0.01960	QRICH2	0.966	-	-	-	-	-	0.966	Mlig455_010082 {REF} {Length: 1457} {RNA1509_49847} {RNA1310_31112} {RNA815_8765} Mlig455_063243 {REF} {Length: 3708} {Pfam: Otopetrin [PF03189.15, score=32.9]} {Human: ENSG00000129646, QRICH2, glutamine rich 2, [Score=91.3, Expect=3e-18]} {RNA1509_49847} {RNA1310_26077} {RNA815_8765}
3.	MligTC455_37185	392	8.17	Mlig455_044353, Mlig455_044365	Neo: - Age: -	CTSF	0.953	-	-	-	0.953	-	-	Mlig455_044353 {REF} {Length: 2037} {Pfam: Papain family cysteine protease [PF00112.25, score=254.8]; Cathepsin propeptide inhibitor domain (I29) [PF08246.14, score=33.9]; Peptidase C1-like family [PF03051.17, score=24.7]; Cystatin domain [PF00031.23, score=21.9]} {Human: ENSG00000174080, CTSF, cathepsin F, [RH, Score=319, Expect=1e-102]} {Mouse: ENSMUSG00000083282, Ctsf, cathepsin F, [RH, Score=327, Expect=6e-106]} {Dmel: FBgn0260462, CG12163, [RH, Score=321, Expect=6e-102]} {Celegans: WBGene00007055, tag-196, [RH, Score=359, Expect=1e-118]} {Smed: dd_Smed_v6_456_0_1, dd_Smed_v6_456_0_1, [RH, Score=430, Expect=1e-146]} {RNA1509_385} {RNA1310_12523.1} {RNA815_5512} Mlig455_044365 {REF} {Length: 1893} {Pfam: Papain family cysteine protease [PF00112.25, score=254.7]; Cathepsin propeptide inhibitor domain (I29) [PF08246.14, score=33.9]; Peptidase C1-like family [PF03051.17, score=24.7]; Cystatin domain [PF00031.23, score=21.9]} {Human: ENSG00000174080, CTSF, cathepsin F, [RH, Score=317, Expect=8e-102]} {Mouse: ENSMUSG00000083282, Ctsf, cathepsin F, [RH, Score=325, Expect=3e-105]} {Dmel: FBgn0260462, CG12163, [RH, Score=320, Expect=1e-101]} {Celegans: WBGene00007055, tag-196, [RH, Score=362, Expect=6e-120]} {Smed: dd_Smed_v6_456_0_1, dd_Smed_v6_456_0_1, [RH, Score=431, Expect=5e-147]} {RNA1509_385} {RNA1310_12523.1} {RNA815_5512}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_36224

324

6.74

Mlig455_028910

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=2.098

1.000

Mlig455_028910 {REF} {Length: 16518} {RNA1509_4302} {RNA1310_110} {RNA815_3071}

MligTC455_06259

1.41

Mlig455_010082, Mlig455_063243

Neo: -

Age: Down-Up-Down

Region-enriched R8: 4.096/0.01960

QRICH2

0.966

Mlig455_010082 {REF} {Length: 1457} {RNA1509_49847} {RNA1310_31112} {RNA815_8765}

Mlig455_063243 {REF} {Length: 3708} {Pfam: Otopetrin [PF03189.15, score=32.9]} {Human: ENSG00000129646, QRICH2, glutamine rich 2, [Score=91.3, Expect=3e-18]} {RNA1509_49847} {RNA1310_26077} {RNA815_8765}

MligTC455_37185

392

8.17

Mlig455_044353, Mlig455_044365

Neo: -

Age: -

CTSF

0.953

Mlig455_044353 {REF} {Length: 2037} {Pfam: Papain family cysteine protease [PF00112.25, score=254.8]; Cathepsin propeptide inhibitor domain (I29) [PF08246.14, score=33.9]; Peptidase C1-like family [PF03051.17, score=24.7]; Cystatin domain [PF00031.23, score=21.9]} {Human: ENSG00000174080, CTSF, cathepsin F, [RH, Score=319, Expect=1e-102]} {Mouse: ENSMUSG00000083282, Ctsf, cathepsin F, [RH, Score=327, Expect=6e-106]} {Dmel: FBgn0260462, CG12163, [RH, Score=321, Expect=6e-102]} {Celegans: WBGene00007055, tag-196, [RH, Score=359, Expect=1e-118]} {Smed: dd_Smed_v6_456_0_1, dd_Smed_v6_456_0_1, [RH, Score=430, Expect=1e-146]} {RNA1509_385} {RNA1310_12523.1} {RNA815_5512}

Mlig455_044365 {REF} {Length: 1893} {Pfam: Papain family cysteine protease [PF00112.25, score=254.7]; Cathepsin propeptide inhibitor domain (I29) [PF08246.14, score=33.9]; Peptidase C1-like family [PF03051.17, score=24.7]; Cystatin domain [PF00031.23, score=21.9]} {Human: ENSG00000174080, CTSF, cathepsin F, [RH, Score=317, Expect=8e-102]} {Mouse: ENSMUSG00000083282, Ctsf, cathepsin F, [RH, Score=325, Expect=3e-105]} {Dmel: FBgn0260462, CG12163, [RH, Score=320, Expect=1e-101]} {Celegans: WBGene00007055, tag-196, [RH, Score=362, Expect=6e-120]} {Smed: dd_Smed_v6_456_0_1, dd_Smed_v6_456_0_1, [RH, Score=431, Expect=5e-147]} {RNA1509_385} {RNA1310_12523.1} {RNA815_5512}