Data search
Results for MligTC455_36254
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36254 | 3089 | 64.36 | Mlig455_001367 | Neo: - Age: - |
GPC4 | Mlig455_001367 {REF} {Length: 6001} {TRANSSPLICED} {Pfam: Glypican [PF01153.21, score=256.6]} {Human: ENSG00000076716, GPC4, glypican 4, [RH, Score=185, Expect=2e-49]; ENSG00000183098, GPC6, glypican 6, [RH, Score=180, Expect=1e-47]} {Mouse: ENSMUSG00000031119, Gpc4, glypican 4, [RH, Score=184, Expect=4e-49]; ENSMUSG00000058571, Gpc6, glypican 6, [RH, Score=181, Expect=5e-48]} {RNA1509_2649, RNA1509_46802, RNA1509_50600, RNA1509_6126} {RNA1310_2329, RNA1509_46802, RNA1509_50600, RNA1509_6126} {RNA1509_46802, RNA1509_50600, RNA1509_6126, RNA815_4068} |
Cumulative graph for MligTC455_36254
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.191 | 6.081 | 0.06532 | 0.57759 | |
| RegionR2 | 0.52 | 6.081 | 0.02320 | 0.16888 | |
| RegionR3 | -0.082 | 6.081 | 0.68258 | 1.00000 | |
| RegionR4 | -0.462 | 6.081 | 0.06698 | 0.23493 | |
| RegionR5 | -0.766 | 6.081 | 0.00025 | 0.00340 | |
| RegionR6 | 0.397 | 6.081 | 0.04065 | 0.37862 | |
| RegionR7 | 0.668 | 6.081 | 0.00332 | 0.08258 | |
| RegionR8 | 0.916 | 6.081 | 0.00042 | 0.02445 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.742 | 6.081 | 0.40195 | 1.00000 | |
| RegenerationR2 | -0.144 | 6.081 | 0.45067 | 0.84732 | |
| RegenerationR3 | 0.101 | 6.081 | 0.64861 | 0.92823 | |
| RegenerationR4 | 0.158 | 6.081 | 0.50241 | 0.87062 | |
| RegenerationR5 | 0.458 | 6.081 | 0.03533 | 0.31246 | |
| RegenerationR6 | -0.289 | 6.081 | 0.18633 | 0.52272 | |
| RegenerationBL | -0.495 | 6.081 | 0.04196 | 0.23302 | |
| RegenerationTP | -0.981 | 6.081 | 0.00020 | 0.01812 |
Genes with expression patterns similar to MligTC455_36254
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36254 | 3089 | 64.36 | Mlig455_001367 | Neo: - Age: - |
GPC4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_001367 {REF} {Length: 6001} {TRANSSPLICED} {Pfam: Glypican [PF01153.21, score=256.6]} {Human: ENSG00000076716, GPC4, glypican 4, [RH, Score=185, Expect=2e-49]; ENSG00000183098, GPC6, glypican 6, [RH, Score=180, Expect=1e-47]} {Mouse: ENSMUSG00000031119, Gpc4, glypican 4, [RH, Score=184, Expect=4e-49]; ENSMUSG00000058571, Gpc6, glypican 6, [RH, Score=181, Expect=5e-48]} {RNA1509_2649, RNA1509_46802, RNA1509_50600, RNA1509_6126} {RNA1310_2329, RNA1509_46802, RNA1509_50600, RNA1509_6126} {RNA1509_46802, RNA1509_50600, RNA1509_6126, RNA815_4068} |
| 2. | MligTC455_36255 | 2576 | 53.68 | Mlig455_001382 | Neo: - Age: Up-Down-Down Region-enriched R8: 1.004/0.04463 |
GPC4 | 5.618 | 0.940 | 0.991 | 0.920 | 0.950 | 0.832 | 0.985 | Mlig455_001382 {REF} {Length: 6265} {TRANSSPLICED} {Pfam: Glypican [PF01153.21, score=256.9]} {Human: ENSG00000076716, GPC4, glypican 4, [RH, Score=185, Expect=2e-49]; ENSG00000183098, GPC6, glypican 6, [RH, Score=180, Expect=9e-48]} {Mouse: ENSMUSG00000031119, Gpc4, glypican 4, [RH, Score=184, Expect=3e-49]; ENSMUSG00000058571, Gpc6, glypican 6, [RH, Score=181, Expect=3e-48]} {RNA1509_2649, RNA1509_50675} {RNA1310_2329, RNA1509_2649, RNA1509_50675} {RNA1509_2649, RNA1509_50675, RNA815_4068} |
| 3. | MligTC455_42700 | 851 | 17.73 | Mlig455_034472 | Neo: - Age: - Region-enriched R2: 1.255/0.04544 |
YWHAE | 0.972 | - | - | - | - | 0.972 | - | Mlig455_034472 {REF} {Length: 1614} {TRANSSPLICED} {Pfam: 14-3-3 protein [PF00244.22, score=258.7]} {Human: ENSG00000108953, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [Score=300, Expect=1e-103]; ENSG00000274474, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [Score=300, Expect=1e-103]} {Mouse: ENSMUSG00000020849, Ywhae, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide, [Score=300, Expect=1e-103]} {Dmel: FBgn0020238, 14-3-3epsilon, [Score=299, Expect=3e-103]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [Score=236, Expect=8e-79]} {Smed: dd_Smed_v6_1702_0_1, dd_Smed_v6_1702_0_1, [Score=273, Expect=4e-93]} {RNA1509_35947, RNA1509_43335, RNA1509_50818} {RNA1310_15023.1, RNA1509_35947, RNA1509_50818} {RNA1509_35947, RNA1509_50818, RNA815_5579} |
| 4. | MligTC455_48043 | 1751 | 36.48 | Mlig455_017279, Mlig455_017291 | Neo: - Age: - Region-enriched R7: 2.553/0.00000 Regeneration-downregulated BL: -2.231 Regeneration-depleted BL: -2.231 |
0.971 | - | - | - | - | 0.971 | - | Mlig455_017279 {REF} {Length: 4223} {RNA1509_52225} {RNA1310_3440.1} {RNA815_638.1} Mlig455_017291 {REF} {Length: 3855} {RNA1509_3814, RNA1509_50356} {RNA1310_3440.1, RNA1509_50356} {RNA1509_50356, RNA815_638.1} |
|
| 5. | MligTC455_41180 | 128 | 2.66 | Mlig455_048529 | Neo: - Age: - Region-enriched R2: 3.286/0.00629 |
0.962 | - | - | - | - | 0.962 | - | Mlig455_048529 {REF} {Length: 672} {NoTransDecoderORF} {RNA1310_69878} {RNA815_35715} |
Berezikov Lab - 2020-2021 © ERIBA