TomoSeq data search

Data search

Results for MligTC455_36281

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36281

1061

22.11

Mlig455_009920, Mlig455_027794, Mlig455_042894, Mlig455_055016, Mlig455_063044, Mlig455_070832

Neo: -

Age: -

Region-enriched R4: 2.226/0.01847

CHRNA2

Mlig455_009920 {REF} {Length: 1983} {NoTransDecoderORF} {RNA1509_11222} {RNA1310_16919.1} {RNA815_22812.2}

Mlig455_027794 {REF} {Length: 736} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11222} {RNA1310_49542.1} {RNA815_22812.2}

Mlig455_042894 {REF} {Length: 1451} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11222} {RNA1310_16919.1} {RNA815_22812.2}

Mlig455_055016 {REF} {Length: 2016} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=154.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=34.9]} {Human: ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=177, Expect=1e-48]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=174, Expect=1e-47]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=174, Expect=1e-47]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=173, Expect=2e-47]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=172, Expect=4e-47]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=169, Expect=2e-45]} {Mouse: ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=176, Expect=1e-48]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=174, Expect=3e-48]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=171, Expect=5e-46]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=170, Expect=1e-46]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=170, Expect=2e-46]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=175, Expect=5e-48]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=157, Expect=1e-41]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=197, Expect=1e-56]} {RNA1310_79571} {RNA815_41465}

Mlig455_063044 {REF} {Length: 736} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11222} {RNA1310_49542.1} {RNA815_22812.2}

Mlig455_070832 {REF} {Length: 734} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11222} {RNA1310_49542.1} {RNA815_22812.2}

Cumulative graph for MligTC455_36281

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.909	4.636	0.41100	1.00000
RegionR2	-1.178	4.636	0.08851	0.36524
RegionR3	-0.34	4.636	0.54724	1.00000
RegionR4	2.226	4.636	0.00209	0.01847
RegionR5	0.283	4.636	0.61541	0.97225
RegionR6	-1.463	4.636	0.02202	0.26868
RegionR7	0.67	4.636	0.28578	0.91949
RegionR8	-1.107	4.636	0.21907	0.82612

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.746	4.636	0.26267	0.96879
RegenerationR2	0.776	4.636	0.22186	0.66887
RegenerationR3	0.011	4.636	0.98880	1.00000
RegenerationR4	-0.765	4.636	0.29657	0.73891
RegenerationR5	-0.174	4.636	0.79889	0.98823
RegenerationR6	0.452	4.636	0.53818	0.83196
RegenerationBL	0.535	4.636	0.42327	0.79140
RegenerationTP	-0.23	4.636	0.77044	1.00000

Genes with expression patterns similar to MligTC455_36281

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36281	1061	22.11	Mlig455_009920, Mlig455_027794, Mlig455_042894, Mlig455_055016, Mlig455_063044, Mlig455_070832	Neo: - Age: - Region-enriched R4: 2.226/0.01847	CHRNA2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_009920 {REF} {Length: 1983} {NoTransDecoderORF} {RNA1509_11222} {RNA1310_16919.1} {RNA815_22812.2} Mlig455_027794 {REF} {Length: 736} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11222} {RNA1310_49542.1} {RNA815_22812.2} Mlig455_042894 {REF} {Length: 1451} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11222} {RNA1310_16919.1} {RNA815_22812.2} Mlig455_055016 {REF} {Length: 2016} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=154.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=34.9]} {Human: ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=177, Expect=1e-48]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=174, Expect=1e-47]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=174, Expect=1e-47]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=173, Expect=2e-47]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=172, Expect=4e-47]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=169, Expect=2e-45]} {Mouse: ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=176, Expect=1e-48]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=174, Expect=3e-48]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=171, Expect=5e-46]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=170, Expect=1e-46]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=170, Expect=2e-46]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=175, Expect=5e-48]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=157, Expect=1e-41]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=197, Expect=1e-56]} {RNA1310_79571} {RNA815_41465} Mlig455_063044 {REF} {Length: 736} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11222} {RNA1310_49542.1} {RNA815_22812.2} Mlig455_070832 {REF} {Length: 734} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11222} {RNA1310_49542.1} {RNA815_22812.2}
2.	MligTC455_53773	707	14.74	Mlig455_002240	Neo: - Age: logFC(26M/2M)=-0.336	ERICH3	2.576	-	-	0.844	-	0.778	0.954	Mlig455_002240 {REF} {Length: 6404} {Pfam: PLAT/LH2 domain [PF01477.25, score=233.3]; Domain of unknown function (DUF4590) [PF15257.8, score=138.1]; Embryo-specific protein 3, (ATS3) [PF06232.13, score=44.3]} {Human: ENSG00000178965, ERICH3, glutamate rich 3, [RH, Score=135, Expect=3e-31]} {Mouse: ENSMUSG00000078161, Erich3, glutamate rich 3, [RH, Score=127, Expect=1e-28]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=59.3, Expect=2e-08]} {Smed: dd_Smed_v6_8627_0_1, dd_Smed_v6_8627_0_1, [Score=130, Expect=4e-30]} {RNA1509_1640} {RNA1310_3685} {RNA815_304.1}
3.	MligTC455_31292	287	5.97	Mlig455_059964	Neo: - Age: logFC(26M/2M)=-0.518		1.791	-	-	-	-	0.839	0.952	Mlig455_059964 {REF} {Length: 6272} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4549) [PF15082.8, score=142.8]; Ligand-gated ion channel [PF00060.28, score=50.1]} {Mouse: ENSMUSG00000075225, Ccdc162, coiled-coil domain containing 162, [Score=914, Expect=0.0]} {Dmel: FBgn0052704, Ir8a, Ionotropic receptor 8a, [Score=55.5, Expect=5e-07]} {Celegans: WBGene00001618, glr-7, GLutamate Receptor family (AMPA), [Score=58.2, Expect=6e-08]} {Smed: dd_Smed_v6_16643_0_1, dd_Smed_v6_16643_0_1, [RH, Score=706, Expect=0.0]} {RNA1509_21772} {RNA1310_311.1} {RNA815_144.1}
4.	MligTC455_34365	761	15.86	Mlig455_045898	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-1.155		1.783	-	-	-	-	0.815	0.968	Mlig455_045898 {REF} {Length: 1534} {RNA1509_18388, RNA1509_36026, RNA1509_43852} {RNA1310_33460, RNA1509_18388, RNA1509_36026, RNA1509_43852} {RNA1509_18388, RNA1509_36026, RNA1509_43852, RNA815_35266}
5.	MligTC455_23083	766	15.95	Mlig455_024192	Neo: - Age: -	FAT4	1.78	-	-	-	-	0.821	0.959	Mlig455_024192 {REF} {Length: 8456} {Pfam: Cadherin domain [PF00028.19, score=728.8]; Cadherin-like [PF16184.7, score=114.5]; Cadherin-like [PF08266.14, score=28.3]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=540, Expect=2e-154]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=514, Expect=2e-146]} {Dmel: FBgn0284247, ds, dachsous, [Score=460, Expect=4e-130]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=276, Expect=5e-74]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=281, Expect=2e-75]} {RNA1509_848} {RNA1310_296} {RNA815_105}
6.	MligTC455_36629	279	5.81	Mlig455_069684	Neo: - Age: Down-Up-Up Region-enriched R2: 2.721/0.01447 Region-enriched R4: 2.304/0.01147		1.763	-	-	0.807	-	-	0.956	Mlig455_069684 {REF} {Length: 2407} {Smed: dd_Smed_v6_2397_0_1, dd_Smed_v6_2397_0_1, [RH, Score=438, Expect=4e-148]} {RNA1509_46354} {RNA1310_10207, RNA1509_46354} {RNA1509_46354, RNA815_3595}
7.	MligTC455_48477	1292	26.92	Mlig455_053235, Mlig455_066374, Mlig455_067867	Neo: - Age: logFC(26M/2M)=-0.325	USP40	1.694	-	-	-	0.725	-	0.969	Mlig455_053235 {REF} {Length: 5648} {RNA1509_19410} {RNA1310_1195.2} {RNA815_1416} Mlig455_066374 {REF} {Length: 5075} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=136.3]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=47.7]} {Human: ENSG00000085982, USP40, ubiquitin specific peptidase 40, [Score=261, Expect=9e-71]} {Mouse: ENSMUSG00000005501, Usp40, ubiquitin specific peptidase 40, [Score=234, Expect=3e-62]} {Dmel: FBgn0016756, Usp47, Ubiquitin specific protease 47, [Score=194, Expect=8e-50]} {Celegans: WBGene00011507, T05H10.1, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=179, Expect=4e-45]} {Smed: dd_Smed_v6_1847_0_2, dd_Smed_v6_1847_0_2, [Score=152, Expect=6e-37]} {RNA1509_19410} {RNA1310_1195.1, RNA1509_19410} {RNA1509_19410, RNA815_1416} Mlig455_067867 {REF} {Length: 5189} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=136.6]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=47.8]} {Human: ENSG00000085982, USP40, ubiquitin specific peptidase 40, [Score=261, Expect=2e-70]} {Mouse: ENSMUSG00000005501, Usp40, ubiquitin specific peptidase 40, [Score=233, Expect=4e-62]} {Dmel: FBgn0016756, Usp47, Ubiquitin specific protease 47, [Score=193, Expect=2e-49]} {Celegans: WBGene00011507, T05H10.1, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=179, Expect=5e-45]} {Smed: dd_Smed_v6_1847_0_1, dd_Smed_v6_1847_0_1, [Score=152, Expect=7e-37]} {RNA1509_19410} {RNA1310_1195.1} {RNA815_1416}
8.	MligTC455_54240	263	5.48	Mlig455_013439	Neo: - Age: - Region-enriched R2: 2.561/0.00697		1.686	-	-	-	-	0.714	0.972	Mlig455_013439 {REF} {Length: 2368} {RNA1509_22627, RNA1509_7343} {RNA1310_14126, RNA1509_22627} {RNA1509_22627, RNA815_5206.1}
9.	MligTC455_27439	211	4.4	Mlig455_040407	Neo: - Age: -		1.677	-	-	-	0.724	-	0.953	Mlig455_040407 {REF} {Length: 590} {RNA1310_75750} {RNA815_36038.1}
10.	MligTC455_35441	205	4.26	Mlig455_009271	Neo: - Age: -		1.666	-	-	-	-	0.711	0.955	Mlig455_009271 {REF} {Length: 2810} {Pfam: Acyltransferase family [PF01757.24, score=99.8]; Nose resistant-to-fluoxetine protein, N-terminal domain [PF20146.1, score=67.2]} {Mouse: ENSMUSG00000046610, Oacyl, O-acyltransferase like, [Score=169, Expect=1e-43]} {Dmel: FBgn0052645, CG32645, [Score=254, Expect=3e-72]} {Celegans: WBGene00007833, oac-6, O-ACyltransferase homolog, [RH, Score=234, Expect=3e-66]} {RNA1509_19999} {RNA1310_7490.1} {RNA815_17892}
11.	MligTC455_43528	1273	26.52	Mlig455_068411	Neo: - Age: Down-Up-Up		1.662	-	-	-	-	0.706	0.956	Mlig455_068411 {REF} {Length: 842} {Pfam: Pancreatic hormone peptide [PF00159.20, score=37.0]} {RNA1509_15391, RNA1509_36078, RNA1509_47628} {RNA1310_43859, RNA1509_15391, RNA1509_36078, RNA1509_47628} {RNA1509_15391, RNA1509_36078, RNA1509_47628, RNA815_26881}
12.	MligTC455_52034	262	5.47	Mlig455_036049	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.456	FAM161A	1.656	-	-	-	-	0.701	0.955	Mlig455_036049 {REF} {Length: 4013} {Pfam: Uncharacterised protein family UPF0564 [PF10595.11, score=139.9]; Family of unknown function (DUF5641) [PF18701.3, score=27.0]} {Human: ENSG00000170264, FAM161A, FAM161A, centrosomal protein, [RH, Score=79.3, Expect=1e-14]} {Mouse: ENSMUSG00000021234, Fam161b, family with sequence similarity 161, member B, [Score=66.6, Expect=6e-11]; ENSMUSG00000049811, Fam161a, family with sequence similarity 161, member A, [Score=65.5, Expect=1e-10]} {Smed: dd_Smed_v6_15201_0_1, dd_Smed_v6_15201_0_1, [RH, Score=186, Expect=5e-50]} {RNA1509_10896} {RNA1310_9692.1} {RNA815_784}
13.	MligTC455_19923	1316	27.42	Mlig455_035383	Neo: - Age: logFC(26M/2M)=0.408 Region-enriched R4: 1.466/0.00490		0.97	-	-	-	-	-	0.970	Mlig455_035383 {REF} {Length: 810} {RNA1509_32347} {RNA1310_65138} {RNA815_44547}
14.	MligTC455_30367	117	2.44	Mlig455_005500	Neo: - Age: Up-Down-Down		0.963	-	-	-	-	-	0.963	Mlig455_005500 {REF} {Length: 3661} {RNA1509_29925} {RNA1310_1263.1, RNA1509_29925} {RNA1509_29925, RNA815_2468}
15.	MligTC455_46817	736	15.34	Mlig455_064460	Neo: - Age: Up-Down-Down		0.955	-	-	-	0.955	-	-	Mlig455_064460 {REF} {Length: 6879} {TRANSSPLICED} {Pfam: Orn/Lys/Arg decarboxylase, major domain [PF01276.22, score=337.9]; Aminotransferase class I and II [PF00155.23, score=31.1]; Orn/Lys/Arg decarboxylase, C-terminal domain [PF03711.17, score=26.6]; Beta-eliminating lyase [PF01212.23, score=24.2]; Cys/Met metabolism PLP-dependent enzyme [PF01053.22, score=17.6]} {RNA1509_14578, RNA1509_238, RNA1509_39655, RNA1509_55287, RNA1509_7793} {RNA1310_10264.1, RNA1509_14578, RNA1509_238, RNA1509_39655, RNA1509_55287, RNA1509_7793} {RNA1509_14578, RNA1509_238, RNA1509_39655, RNA1509_55287, RNA1509_7793, RNA815_2364.1}
16.	MligTC455_48998	844	17.59	Mlig455_042574	Neo: - Age: -	GRIK2	0.953	-	-	-	-	-	0.953	Mlig455_042574 {REF} {Length: 4545} {Pfam: Ligand-gated ion channel [PF00060.28, score=98.9]; Receptor family ligand binding region [PF01094.30, score=46.6]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=43.9]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=39.5]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=128, Expect=3e-29]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=126, Expect=1e-28]} {Mouse: ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=125, Expect=1e-28]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=125, Expect=2e-28]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=122, Expect=2e-27]} {Dmel: FBgn0039927, CG11155, [Score=142, Expect=8e-34]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=129, Expect=6e-30]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=223, Expect=3e-64]} {RNA1509_10680} {RNA1310_13007.1} {RNA815_11044}
17.	MligTC455_19793	281	5.86	Mlig455_066679	Neo: - Age: - Region-enriched R2: 2.701/0.03132	PARP3	0.95	-	-	-	-	-	0.950	Mlig455_066679 {REF} {Length: 2521} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase, regulatory domain [PF02877.16, score=139.1]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=137.9]; WGR domain [PF05406.17, score=94.9]} {Human: ENSG00000041880, PARP3, poly(ADP-ribose) polymerase family member 3, [RH, Score=429, Expect=8e-145]} {Mouse: ENSMUSG00000023249, Parp3, poly (ADP-ribose) polymerase family, member 3, [RH, Score=396, Expect=2e-132]} {Dmel: FBgn0010247, Parp, Poly-(ADP-ribose) polymerase, [Score=256, Expect=9e-75]} {Celegans: WBGene00004049, parp-1, Poly(ADP-ribose) polymerase pme-1, [Score=218, Expect=1e-61]} {Smed: dd_Smed_v6_2611_0_1, dd_Smed_v6_2611_0_1, [RH, Score=265, Expect=8e-85]} {RNA1509_3170} {RNA1310_8330} {RNA815_11984}
18.	MligTC455_46848	5993	124.86	Mlig455_028990	Neo: - Age: -	GABARAPL2	0.95	-	-	-	-	-	0.950	Mlig455_028990 {REF} {Length: 3025} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=163.3]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=25.7]} {Human: ENSG00000034713, GABARAPL2, GABA type A receptor associated protein like 2, [RH, Score=176, Expect=5e-58]} {Mouse: ENSMUSG00000031950, Gabarapl2, gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2, [RH, Score=176, Expect=3e-58]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [Score=147, Expect=6e-47]} {Celegans: WBGene00002980, lgg-1, [Score=149, Expect=1e-47]} {Smed: dd_Smed_v6_1441_0_1, dd_Smed_v6_1441_0_1, [RH, Score=174, Expect=2e-57]} {RNA1509_15311, RNA1509_3379, RNA1509_5004} {RNA1310_32656.1, RNA1509_15311, RNA1509_3379, RNA1509_5004} {RNA1509_15311, RNA1509_3379, RNA1509_5004, RNA815_11338}
19.	MligTC455_49912	1647	34.32	Mlig455_035958	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.258		0.95	-	-	-	-	-	0.950	Mlig455_035958 {REF} {Length: 3547} {TRANSSPLICED} {Celegans: WBGene00021017, cil-7, CILiary localization, [Score=206, Expect=1e-58]} {RNA1509_7606} {RNA1310_9956} {RNA815_6091}

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