TomoSeq data search

Data search

Results for MligTC455_36448

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36448

155

3.22

Mlig455_002008, Mlig455_015250

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-1.957

CLVS1

Mlig455_002008 {REF} {Length: 274} {TRANSSPLICED} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=18.6]} {Dmel: FBgn0013720, pck, pickel, [Score=64.3, Expect=1e-13]} {Smed: dd_Smed_v6_2204_1_1, dd_Smed_v6_2204_1_1, [Score=53.9, Expect=3e-09]} {RNA1509_19290} {RNA1310_36068} {RNA815_22060}

Mlig455_015250 {REF} {Length: 5436} {Pfam: CRAL/TRIO domain [PF00650.22, score=80.2]; Divergent CRAL/TRIO domain [PF13716.8, score=29.5]; CRAL/TRIO, N-terminal domain [PF03765.17, score=28.0]} {Human: ENSG00000177182, CLVS1, clavesin 1, [RH, Score=175, Expect=5e-51]} {Mouse: ENSMUSG00000041216, Clvs1, clavesin 1, [RH, Score=173, Expect=1e-50]; ENSMUSG00000019785, Clvs2, clavesin 2, [RH, Score=165, Expect=1e-47]} {Dmel: FBgn0032785, CG10026, [Score=91.7, Expect=1e-20]} {Celegans: WBGene00011962, T23G5.2, CRAL-TRIO domain-containing protein T23G5.2, [Score=57.0, Expect=1e-08]} {Smed: dd_Smed_v6_14357_0_1, dd_Smed_v6_14357_0_1, [Score=57.4, Expect=4e-09]} {RNA1509_19821, RNA1509_35087} {RNA1310_35993, RNA1509_19821} {RNA1509_19821, RNA815_16196.1}

Cumulative graph for MligTC455_36448

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.243	2.26	0.99952	1.00000
RegionR2	-0.82	2.26	0.90424	1.00000
RegionR3	-0.024	2.26	0.75184	1.00000
RegionR4	2.311	2.26	0.11025	0.32832
RegionR5	1.621	2.26	0.16406	0.42823
RegionR6	2.012	2.26	0.10030	0.58143
RegionR7	-4.359	2.26	1.00000	1.00000
RegionR8	2.502	2.26	0.11685	0.63072

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.724	2.26	0.53920	1.00000
RegenerationR2	0.561	2.26	0.63707	0.93040
RegenerationR3	-0.244	2.26	0.85055	0.99853
RegenerationR4	-0.197	2.26	0.86499	1.00000
RegenerationR5	0.73	2.26	0.51213	0.86506
RegenerationR6	-0.008	2.26	0.97959	1.00000
RegenerationBL	1.208	2.26	0.38494	0.75320
RegenerationTP	2.205	2.26	0.24463	0.69097

Genes with expression patterns similar to MligTC455_36448

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36448	155	3.22	Mlig455_002008, Mlig455_015250	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-1.957	CLVS1	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_002008 {REF} {Length: 274} {TRANSSPLICED} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=18.6]} {Dmel: FBgn0013720, pck, pickel, [Score=64.3, Expect=1e-13]} {Smed: dd_Smed_v6_2204_1_1, dd_Smed_v6_2204_1_1, [Score=53.9, Expect=3e-09]} {RNA1509_19290} {RNA1310_36068} {RNA815_22060} Mlig455_015250 {REF} {Length: 5436} {Pfam: CRAL/TRIO domain [PF00650.22, score=80.2]; Divergent CRAL/TRIO domain [PF13716.8, score=29.5]; CRAL/TRIO, N-terminal domain [PF03765.17, score=28.0]} {Human: ENSG00000177182, CLVS1, clavesin 1, [RH, Score=175, Expect=5e-51]} {Mouse: ENSMUSG00000041216, Clvs1, clavesin 1, [RH, Score=173, Expect=1e-50]; ENSMUSG00000019785, Clvs2, clavesin 2, [RH, Score=165, Expect=1e-47]} {Dmel: FBgn0032785, CG10026, [Score=91.7, Expect=1e-20]} {Celegans: WBGene00011962, T23G5.2, CRAL-TRIO domain-containing protein T23G5.2, [Score=57.0, Expect=1e-08]} {Smed: dd_Smed_v6_14357_0_1, dd_Smed_v6_14357_0_1, [Score=57.4, Expect=4e-09]} {RNA1509_19821, RNA1509_35087} {RNA1310_35993, RNA1509_19821} {RNA1509_19821, RNA815_16196.1}
2.	MligTC455_36449	215	4.47	Mlig455_015126	Neo: - Age: -	CLVS1	1.947	-	-	-	0.949	-	0.998	Mlig455_015126 {REF} {Length: 2923} {Pfam: CRAL/TRIO domain [PF00650.22, score=80.2]; Divergent CRAL/TRIO domain [PF13716.8, score=29.5]; CRAL/TRIO, N-terminal domain [PF03765.17, score=28.0]} {Human: ENSG00000177182, CLVS1, clavesin 1, [RH, Score=176, Expect=3e-51]} {Mouse: ENSMUSG00000041216, Clvs1, clavesin 1, [RH, Score=173, Expect=2e-50]; ENSMUSG00000019785, Clvs2, clavesin 2, [RH, Score=165, Expect=1e-47]} {Dmel: FBgn0032785, CG10026, [Score=91.7, Expect=1e-20]} {Celegans: WBGene00011962, T23G5.2, CRAL-TRIO domain-containing protein T23G5.2, [Score=57.0, Expect=1e-08]} {Smed: dd_Smed_v6_14357_0_1, dd_Smed_v6_14357_0_1, [Score=57.4, Expect=3e-09]} {RNA1509_19821, RNA1509_58987} {RNA1310_35993, RNA1509_58987} {RNA1509_58987, RNA815_16196.1}
3.	MligTC455_52866	78	1.63	Mlig455_023043, Mlig455_029545	Neo: - Age: - Region-enriched R4: 4.760/0.04612		0.975	-	-	-	-	-	0.975	Mlig455_023043 {REF} {Length: 2257} {NoTransDecoderORF} {RNA1509_35052} {RNA1310_43347} {RNA815_31290} Mlig455_029545 {REF} {Length: 2893} {NoTransDecoderORF} {RNA1509_46791} {RNA1310_43347} {RNA815_59260}
4.	MligTC455_28544	240	5.01	Mlig455_047249	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.358 Region-enriched R5: 3.654/0.00000 Region-enriched R6: 3.030/0.00123		0.968	-	-	-	-	-	0.968	Mlig455_047249 {REF} {Length: 2624} {Pfam: wnt family [PF00110.21, score=35.0]} {Smed: dd_Smed_v6_16209_0_1, dd_Smed_v6_16209_0_1, [Score=47.4, Expect=8e-06]} {RNA1509_18416} {RNA1310_7598} {RNA815_6127}
5.	MligTC455_28545	477	9.94	Mlig455_047160, Mlig455_047302	Neo: - Age: - Region-enriched R5: 3.571/0.00001 Region-enriched R6: 2.892/0.00720	WNT3A	0.968	-	-	-	-	-	0.968	Mlig455_047160 {REF} {Length: 3266} {Pfam: wnt family [PF00110.21, score=135.6]} {Human: ENSG00000154342, WNT3A, Wnt family member 3A, [Score=89.4, Expect=6e-19]; ENSG00000105989, WNT2, Wnt family member 2, [Score=87.4, Expect=2e-18]; ENSG00000085741, WNT11, Wnt family member 11, [Score=86.3, Expect=7e-18]} {Mouse: ENSMUSG00000015957, Wnt11, wingless-type MMTV integration site family, member 11, [Score=94.4, Expect=7e-21]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=86.7, Expect=6e-18]} {Celegans: WBGene00000857, cwn-1, [Score=89.7, Expect=2e-19]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [RH, Score=137, Expect=2e-36]} {RNA1509_18416} {RNA1310_7598, RNA1509_18416} {RNA1509_18416, RNA815_6127} Mlig455_047302 {REF} {Length: 3256} {Pfam: wnt family [PF00110.21, score=135.6]} {Human: ENSG00000154342, WNT3A, Wnt family member 3A, [Score=89.4, Expect=6e-19]; ENSG00000105989, WNT2, Wnt family member 2, [Score=87.4, Expect=2e-18]; ENSG00000085741, WNT11, Wnt family member 11, [Score=86.3, Expect=7e-18]} {Mouse: ENSMUSG00000015957, Wnt11, wingless-type MMTV integration site family, member 11, [Score=94.4, Expect=7e-21]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=86.7, Expect=6e-18]} {Celegans: WBGene00000857, cwn-1, [Score=89.7, Expect=2e-19]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [RH, Score=137, Expect=2e-36]} {RNA1509_18416} {RNA1310_7598} {RNA815_6127}
6.	MligTC455_40398	107	2.23	Mlig455_065346	Neo: - Age: logFC(26M/2M)=-0.357	UCHL3	0.957	-	-	-	-	-	0.957	Mlig455_065346 {REF} {Length: 1850} {Pfam: Ubiquitin carboxyl-terminal hydrolase, family 1 [PF01088.23, score=190.9]} {Human: ENSG00000118939, UCHL3, ubiquitin C-terminal hydrolase L3, [RH, Score=201, Expect=9e-65]} {Mouse: ENSMUSG00000022111, Uchl3, ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase), [RH, Score=201, Expect=6e-65]; ENSMUSG00000035337, Uchl4, ubiquitin carboxyl-terminal esterase L4, [RH, Score=192, Expect=4e-61]} {Dmel: FBgn0010288, Uch, Ubiquitin carboxy-terminal hydrolase, [RH, Score=172, Expect=8e-54]} {Celegans: WBGene00006721, ubh-1, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=110, Expect=1e-29]} {Smed: dd_Smed_v6_7488_0_1, dd_Smed_v6_7488_0_1, [RH, Score=187, Expect=6e-60]} {RNA1509_16357} {RNA1310_29575} {RNA815_15587}
7.	MligTC455_29848	39	0.82	Mlig455_013358	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_013358 {REF} {Length: 2217} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=33.0]} {RNA1509_11319} {RNA1310_7370.1} {RNA815_6444}

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