Data search
Results for MligTC455_36473
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36473 | 134 | 2.79 | Mlig455_035518 | Neo: Irradiation Age: - |
TRMT44 | Mlig455_035518 {REF} {Length: 3091} {TRANSSPLICED} {Pfam: Predicted AdoMet-dependent methyltransferase [PF07757.15, score=132.8]} {Human: ENSG00000155275, TRMT44, tRNA methyltransferase 44 homolog, [RH, Score=203, Expect=5e-58]} {Mouse: ENSMUSG00000029097, Trmt44, tRNA methyltransferase 44, [RH, Score=207, Expect=5e-57]} {Dmel: FBgn0037708, CG9386, [RH, Score=222, Expect=5e-64]} {Celegans: WBGene00016014, C23G10.7, Probable tRNA (uracil-O(2)-)-methyltransferase, [RH, Score=179, Expect=2e-48]} {Smed: dd_Smed_v6_10491_1_2, dd_Smed_v6_10491_1_2, [RH, Score=243, Expect=3e-72]} {RNA1509_10080} {RNA1310_10728.1, RNA1509_10080} {RNA1509_10080, RNA815_3687} |
Cumulative graph for MligTC455_36473
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.288 | 2.277 | 0.78201 | 1.00000 | |
| RegionR2 | 1.787 | 2.277 | 0.14066 | 0.46652 | |
| RegionR3 | 0.353 | 2.277 | 0.63724 | 1.00000 | |
| RegionR4 | -0.176 | 2.277 | 0.88056 | 1.00000 | |
| RegionR5 | 0.589 | 2.277 | 0.49348 | 0.85697 | |
| RegionR6 | 0.65 | 2.277 | 0.48461 | 1.00000 | |
| RegionR7 | 1.498 | 2.277 | 0.18955 | 0.79282 | |
| RegionR8 | -4.988 | 2.277 | 0.14048 | 0.68466 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 4.034 | 2.277 | 0.13444 | 0.86920 | |
| RegenerationR2 | 2.701 | 2.277 | 0.00650 | 0.12849 | |
| RegenerationR3 | 2.088 | 2.277 | 0.07191 | 0.44853 | |
| RegenerationR4 | 0.969 | 2.277 | 0.40262 | 0.81495 | |
| RegenerationR5 | 0.904 | 2.277 | 0.33131 | 0.75235 | |
| RegenerationR6 | 1.373 | 2.277 | 0.22372 | 0.56874 | |
| RegenerationBL | 2.864 | 2.277 | 0.15175 | 0.46551 | |
| RegenerationTP | 2.374 | 2.277 | 0.32437 | 0.76858 |
Genes with expression patterns similar to MligTC455_36473
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36473 | 134 | 2.79 | Mlig455_035518 | Neo: Irradiation Age: - |
TRMT44 | 5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_035518 {REF} {Length: 3091} {TRANSSPLICED} {Pfam: Predicted AdoMet-dependent methyltransferase [PF07757.15, score=132.8]} {Human: ENSG00000155275, TRMT44, tRNA methyltransferase 44 homolog, [RH, Score=203, Expect=5e-58]} {Mouse: ENSMUSG00000029097, Trmt44, tRNA methyltransferase 44, [RH, Score=207, Expect=5e-57]} {Dmel: FBgn0037708, CG9386, [RH, Score=222, Expect=5e-64]} {Celegans: WBGene00016014, C23G10.7, Probable tRNA (uracil-O(2)-)-methyltransferase, [RH, Score=179, Expect=2e-48]} {Smed: dd_Smed_v6_10491_1_2, dd_Smed_v6_10491_1_2, [RH, Score=243, Expect=3e-72]} {RNA1509_10080} {RNA1310_10728.1, RNA1509_10080} {RNA1509_10080, RNA815_3687} |
| 2. | MligTC455_45630 | 134 | 2.8 | Mlig455_026867 | Neo: - Age: - |
IRF2 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_026867 {REF} {Length: 4144} {Pfam: Interferon regulatory factor transcription factor [PF00605.19, score=68.7]} {Human: ENSG00000168310, IRF2, interferon regulatory factor 2, [RH, Score=58.2, Expect=1e-09]} {Mouse: ENSMUSG00000031627, Irf2, interferon regulatory factor 2, [RH, Score=57.8, Expect=1e-09]} {RNA1509_40698} {RNA1310_29079} {RNA815_23289} |
| 3. | MligTC455_45484 | 127 | 2.64 | Mlig455_054852 | Neo: - Age: - Region-enriched R8: 4.705/0.02905 |
DNTTIP2 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_054852 {REF} {Length: 2704} {TRANSSPLICED} {Pfam: Fcf2 pre-rRNA processing [PF08698.13, score=82.8]} {Human: ENSG00000067334, DNTTIP2, deoxynucleotidyltransferase terminal interacting protein 2, [RH, Score=103, Expect=1e-24]} {Mouse: ENSMUSG00000039756, Dnttip2, deoxynucleotidyltransferase, terminal, interacting protein 2, [RH, Score=106, Expect=5e-26]} {Dmel: FBgn0037504, CG1142, [RH, Score=70.9, Expect=3e-14]} {Celegans: WBGene00021715, Y49F6B.2, [RH, Score=93.6, Expect=6e-23]} {Smed: dd_Smed_v6_10912_0_1, dd_Smed_v6_10912_0_1, [RH, Score=62.4, Expect=8e-12]} {RNA1509_18463} {RNA1310_33257, RNA1509_18463} {RNA1509_18463, RNA815_17985} |
| 4. | MligTC455_10562 | 356 | 7.42 | Mlig455_023642 | Neo: - Age: - |
RRAGC | 0.958 | - | - | - | - | - | 0.958 | Mlig455_023642 {REF} {Length: 3636} {Pfam: Gtr1/RagA G protein conserved region [PF04670.14, score=210.6]; ADP-ribosylation factor family [PF00025.23, score=31.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=24.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000116954, RRAGC, Ras related GTP binding C, [RH, Score=409, Expect=2e-140]; ENSG00000025039, RRAGD, Ras related GTP binding D, [RH, Score=399, Expect=1e-136]} {Mouse: ENSMUSG00000028646, Rragc, Ras-related GTP binding C, [RH, Score=408, Expect=2e-140]; ENSMUSG00000028278, Rragd, Ras-related GTP binding D, [RH, Score=399, Expect=5e-137]} {Dmel: FBgn0033272, RagC-D, Ras-related GTP binding C/D, [RH, Score=400, Expect=2e-137]} {Celegans: WBGene00012497, ragc-1, RAs-related GTP binding protein C homolog, [RH, Score=283, Expect=1e-92]} {Smed: dd_Smed_v6_5653_0_1, dd_Smed_v6_5653_0_1, [RH, Score=419, Expect=2e-145]} {RNA1509_9291} {RNA1310_15858.1} {RNA815_8637} |
| 5. | MligTC455_38114 | 228 | 4.74 | Mlig455_012774, Mlig455_070139 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_012774 {REF} {Length: 1873} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_34010} {RNA815_56430} Mlig455_070139 {REF} {Length: 863} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_49425} {RNA815_65230} |
|
| 6. | MligTC455_37876 | 1905 | 39.68 | Mlig455_025693 | Neo: - Age: logFC(26M/2M)=0.314 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_025693 {REF} {Length: 2210} {RNA1509_27839, RNA1509_4444, RNA1509_7821} {RNA1310_3967, RNA1509_27839, RNA1509_4444} {RNA1509_27839, RNA1509_4444, RNA815_2321.1} | |
| 7. | MligTC455_49764 | 109 | 2.28 | Mlig455_004382 | Neo: - Age: - |
TTC39A | 0.955 | - | - | - | 0.955 | - | - | Mlig455_004382 {REF} {Length: 2484} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3808) [PF10300.11, score=302.5]} {Human: ENSG00000085831, TTC39A, tetratricopeptide repeat domain 39A, [Score=274, Expect=2e-83]; ENSG00000155158, TTC39B, tetratricopeptide repeat domain 39B, [Score=261, Expect=1e-77]} {Mouse: ENSMUSG00000028555, Ttc39a, tetratricopeptide repeat domain 39A, [Score=283, Expect=7e-87]; ENSMUSG00000038172, Ttc39b, tetratricopeptide repeat domain 39B, [Score=271, Expect=6e-82]} {Celegans: WBGene00016314, C32D5.6, [Score=201, Expect=1e-56]} {Smed: dd_Smed_v6_6902_0_1, dd_Smed_v6_6902_0_1, [Score=305, Expect=3e-95]} {RNA1509_31140} {RNA1310_3012.1} {RNA815_12014} |
| 8. | MligTC455_53239 | 733 | 15.27 | Mlig455_025537 | Neo: - Age: - Region-specific R2: 4.434 Region-enriched R2: 3.108/0.00000 |
0.954 | - | - | - | - | 0.954 | - | Mlig455_025537 {REF} {Length: 964} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=28.0]} {Dmel: FBgn0051221, CG31221, [RH, Score=70.9, Expect=5e-15]} {Celegans: WBGene00010290, F58H1.7, [Score=63.9, Expect=8e-13]} {Smed: dd_Smed_v6_5576_0_1, dd_Smed_v6_5576_0_1, [RH, Score=168, Expect=2e-53]} {RNA1509_58542} {RNA1310_40950} {RNA815_19778.1} | |
| 9. | MligTC455_34815 | 30 | 0.63 | Mlig455_020979 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_020979 {REF} {Length: 1394} {RNA1310_37266} |
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