TomoSeq data search

Data search

Results for MligTC455_36474

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36474

19

0.40

Mlig455_031118

Neo: Int S/G2/M

Age: -

HAGH

Mlig455_031118 {REF} {Length: 940} {TRANSSPLICED} {Pfam: Hydroxyacylglutathione hydrolase C-terminus [PF16123.7, score=85.6]; Metallo-beta-lactamase superfamily [PF00753.29, score=42.6]} {Human: ENSG00000063854, HAGH, hydroxyacylglutathione hydrolase, [RH, Score=267, Expect=4e-89]} {Mouse: ENSMUSG00000024158, Hagh, hydroxyacyl glutathione hydrolase, [RH, Score=261, Expect=1e-86]} {Dmel: FBgn0037024, tzn, tenzing norgay, [RH, Score=240, Expect=4e-78]} {Celegans: WBGene00012459, Y17G7B.3, [RH, Score=188, Expect=1e-58]} {Smed: dd_Smed_v6_6300_0_1, dd_Smed_v6_6300_0_1, [RH, Score=243, Expect=6e-80]} {RNA1509_36128} {RNA1310_21046.1} {RNA815_10569}

Cumulative graph for MligTC455_36474

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.014	0.785	1.00000	1.00000
RegionR2	0.73	0.785	1.00000	1.00000
RegionR3	-0.125	0.785	0.99999	1.00000
RegionR4	-0.661	0.785	0.99992	1.00000
RegionR5	-0.418	0.785	0.99994	1.00000
RegionR6	-0.05	0.785	1.00000	1.00000
RegionR7	0.261	0.785	0.99998	1.00000
RegionR8	0.276	0.785	0.99998	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.828	0.785	0.99999	1.00000
RegenerationR2	2.558	0.785	0.09324	0.48650
RegenerationR3	3.831	0.785	0.05393	0.39964
RegenerationR4	3.732	0.785	0.03606	0.30688
RegenerationR5	3.846	0.785	0.01806	0.23343
RegenerationR6	4.725	0.785	0.02076	0.17857
RegenerationBL	4.096	0.785	0.06939	0.30611
RegenerationTP	3.502	0.785	0.21361	0.65645

Genes with expression patterns similar to MligTC455_36474

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36474	19	0.4	Mlig455_031118	Neo: Int S/G2/M Age: -	HAGH	3	-	-	-	1.000	1.000	1.000	Mlig455_031118 {REF} {Length: 940} {TRANSSPLICED} {Pfam: Hydroxyacylglutathione hydrolase C-terminus [PF16123.7, score=85.6]; Metallo-beta-lactamase superfamily [PF00753.29, score=42.6]} {Human: ENSG00000063854, HAGH, hydroxyacylglutathione hydrolase, [RH, Score=267, Expect=4e-89]} {Mouse: ENSMUSG00000024158, Hagh, hydroxyacyl glutathione hydrolase, [RH, Score=261, Expect=1e-86]} {Dmel: FBgn0037024, tzn, tenzing norgay, [RH, Score=240, Expect=4e-78]} {Celegans: WBGene00012459, Y17G7B.3, [RH, Score=188, Expect=1e-58]} {Smed: dd_Smed_v6_6300_0_1, dd_Smed_v6_6300_0_1, [RH, Score=243, Expect=6e-80]} {RNA1509_36128} {RNA1310_21046.1} {RNA815_10569}
2.	MligTC455_40306	48	1.01	Mlig455_002742, Mlig455_011497	Neo: - Age: -		0.965	-	-	-	0.965	-	-	Mlig455_002742 {REF} {Length: 449} {NoTransDecoderORF} {RNA1310_120538} Mlig455_011497 {REF} {Length: 438} {NoTransDecoderORF} {RNA1310_120538}
3.	MligTC455_03431	91	1.9	Mlig455_008282, Mlig455_062625, Mlig455_067532, Mlig455_070341	Neo: Irradiation Age: - Region-enriched R5: 4.595/0.00249	PIF1	0.951	-	-	-	0.951	-	-	Mlig455_008282 {REF} {Length: 443} {Pfam: CCDC144C protein coiled-coil region [PF14915.8, score=19.0]} {RNA1310_58768} {RNA815_41936} Mlig455_062625 {REF} {Length: 4534} {Pfam: PIF1-like helicase [PF05970.16, score=307.5]; AAA domain [PF13604.8, score=47.5]; Helicase [PF02689.16, score=24.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=21.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=86.7, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=85.9, Expect=3e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=84.3, Expect=5e-17]} {Celegans: WBGene00018020, F33H12.6, [Score=257, Expect=4e-75]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=97.1, Expect=3e-21]} {RNA1509_48797} {RNA1310_18036.1} {RNA815_358.1} Mlig455_067532 {REF} {Length: 1455} {RNA1310_58768} {RNA815_41936} Mlig455_070341 {REF} {Length: 1238} {Pfam: Exonuclease VII, large subunit [PF02601.17, score=20.3]; HAUS augmin-like complex subunit 3 [PF14932.8, score=18.3]} {RNA1310_58768} {RNA815_41936}
4.	MligTC455_32331	30	0.62	Mlig455_056537	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_056537 {REF} {Length: 1353} {TRANSSPLICED} {RNA1509_53098} {RNA1310_32964} {RNA815_43268}
5.	MligTC455_43171	1167	24.31	Mlig455_061729, Mlig455_061758	Neo: - Age: -	SEC23IP	0.95	-	-	-	0.950	-	-	Mlig455_061729 {REF} {Length: 4216} {TRANSSPLICED} {Pfam: DDHD domain [PF02862.19, score=147.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=32.4]} {Human: ENSG00000107651, SEC23IP, SEC23 interacting protein, [Score=400, Expect=3e-122]} {Mouse: ENSMUSG00000055319, Sec23ip, Sec23 interacting protein, [Score=404, Expect=1e-123]} {Dmel: FBgn0031990, PAPLA1, Phosphatidic Acid Phospholipase A1, [Score=318, Expect=1e-89]} {Celegans: WBGene00019747, ipla-1, Intracelllar PhosphoLipase A family; Intracellular phospholipase A1, [Score=99.8, Expect=5e-21]} {Smed: dd_Smed_v6_4014_0_1, dd_Smed_v6_4014_0_1, [Score=222, Expect=3e-59]} {RNA1509_13804, RNA1509_15441} {RNA1310_13226, RNA1509_13804, RNA1509_15441} {RNA1509_13804, RNA1509_15441, RNA815_26293} Mlig455_061758 {REF} {Length: 5318} {TRANSSPLICED} {Pfam: DDHD domain [PF02862.19, score=147.6]; SAM domain (Sterile alpha motif) [PF00536.32, score=32.4]} {Human: ENSG00000107651, SEC23IP, SEC23 interacting protein, [Score=400, Expect=7e-122]} {Mouse: ENSMUSG00000055319, Sec23ip, Sec23 interacting protein, [Score=402, Expect=5e-123]} {Dmel: FBgn0031990, PAPLA1, Phosphatidic Acid Phospholipase A1, [Score=319, Expect=4e-90]} {Celegans: WBGene00019747, ipla-1, Intracelllar PhosphoLipase A family; Intracellular phospholipase A1, [Score=96.3, Expect=5e-20]} {Smed: dd_Smed_v6_4014_0_1, dd_Smed_v6_4014_0_1, [Score=224, Expect=6e-60]} {RNA1509_13804} {RNA1310_13226} {RNA815_26293}

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