Data search
Results for MligTC455_36558
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36558 | 558 | 11.63 | Mlig455_017281 | Neo: Irradiation Age: - |
ZNF792 | Mlig455_017281 {REF} {Length: 2937} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=80.1]; C2H2-type zinc finger [PF13894.8, score=65.6]; Zinc-finger double domain [PF13465.8, score=39.3]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=25.1]; C2H2-type zinc finger [PF13912.8, score=19.2]} {Human: ENSG00000180884, ZNF792, zinc finger protein 792, [Score=108, Expect=5e-24]; ENSG00000179930, ZNF648, zinc finger protein 648, [Score=107, Expect=1e-23]; ENSG00000171970, ZNF57, zinc finger protein 57, [Score=106, Expect=2e-23]; ENSG00000122386, ZNF205, zinc finger protein 205, [Score=105, Expect=5e-23]; ENSG00000179909, ZNF154, zinc finger protein 154, [Score=105, Expect=2e-23]; ENSG00000251247, ZNF345, zinc finger protein 345, [Score=104, Expect=5e-23]; ENSG00000198482, ZNF808, zinc finger protein 808, [Score=104, Expect=2e-22]; ENSG00000213799, ZNF845, zinc finger protein 845, [Score=104, Expect=2e-22]; ENSG00000062370, ZNF112, zinc finger protein 112, [Score=104, Expect=2e-22]; ENSG00000196378, ZNF34, zinc finger protein 34, [Score=103, Expect=2e-22]} {Mouse: ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=111, Expect=1e-24]; ENSMUSG00000063281, Zfp35, zinc finger protein 35, [Score=110, Expect=8e-25]; ENSMUSG00000051977, Prdm9, PR domain containing 9, [Score=108, Expect=4e-24]; ENSMUSG00000062012, Zfp13, zinc finger protein 13, [Score=107, Expect=5e-24]; ENSMUSG00000006720, Zfp184, zinc finger protein 184 (Kruppel-like), [Score=106, Expect=3e-23]; ENSMUSG00000021327, Zkscan3, zinc finger with KRAB and SCAN domains 3, [Score=106, Expect=1e-23]; ENSMUSG00000020335, Zfp354b, zinc finger protein 354B, [Score=106, Expect=2e-23]; ENSMUSG00000028389, Zfp37, zinc finger protein 37, [Score=106, Expect=2e-23]} {Dmel: FBgn0038301, CG6654, [Score=99.4, Expect=2e-21]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=77.0, Expect=2e-14]} {Smed: dd_Smed_v6_2890_0_1, dd_Smed_v6_2890_0_1, [RH, Score=395, Expect=5e-128]} {RNA1509_39784, RNA1509_41416} {RNA1310_6870, RNA1509_39784, RNA1509_41416} {RNA1509_39784, RNA1509_41416, RNA815_1311.1} |
Cumulative graph for MligTC455_36558
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.081 | 3.881 | 0.95504 | 1.00000 | |
| RegionR2 | -0.529 | 3.881 | 0.33528 | 0.72718 | |
| RegionR3 | -0.652 | 3.881 | 0.15565 | 0.66715 | |
| RegionR4 | 0.424 | 3.881 | 0.39210 | 0.71808 | |
| RegionR5 | -0.04 | 3.881 | 0.92056 | 1.00000 | |
| RegionR6 | -0.299 | 3.881 | 0.49840 | 1.00000 | |
| RegionR7 | 0.63 | 3.881 | 0.25643 | 0.88311 | |
| RegionR8 | 0.547 | 3.881 | 0.47865 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.682 | 3.881 | 0.69210 | 1.00000 | |
| RegenerationR2 | 0.235 | 3.881 | 0.56478 | 0.90073 | |
| RegenerationR3 | 0.521 | 3.881 | 0.26418 | 0.69900 | |
| RegenerationR4 | -0.258 | 3.881 | 0.56708 | 0.90000 | |
| RegenerationR5 | 0.169 | 3.881 | 0.67646 | 0.94343 | |
| RegenerationR6 | 0.492 | 3.881 | 0.27360 | 0.62349 | |
| RegenerationBL | 0.615 | 3.881 | 0.23219 | 0.58384 | |
| RegenerationTP | -0.449 | 3.881 | 0.46337 | 0.87652 |
Genes with expression patterns similar to MligTC455_36558
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36558 | 558 | 11.63 | Mlig455_017281 | Neo: Irradiation Age: - |
ZNF792 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017281 {REF} {Length: 2937} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=80.1]; C2H2-type zinc finger [PF13894.8, score=65.6]; Zinc-finger double domain [PF13465.8, score=39.3]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=25.1]; C2H2-type zinc finger [PF13912.8, score=19.2]} {Human: ENSG00000180884, ZNF792, zinc finger protein 792, [Score=108, Expect=5e-24]; ENSG00000179930, ZNF648, zinc finger protein 648, [Score=107, Expect=1e-23]; ENSG00000171970, ZNF57, zinc finger protein 57, [Score=106, Expect=2e-23]; ENSG00000122386, ZNF205, zinc finger protein 205, [Score=105, Expect=5e-23]; ENSG00000179909, ZNF154, zinc finger protein 154, [Score=105, Expect=2e-23]; ENSG00000251247, ZNF345, zinc finger protein 345, [Score=104, Expect=5e-23]; ENSG00000198482, ZNF808, zinc finger protein 808, [Score=104, Expect=2e-22]; ENSG00000213799, ZNF845, zinc finger protein 845, [Score=104, Expect=2e-22]; ENSG00000062370, ZNF112, zinc finger protein 112, [Score=104, Expect=2e-22]; ENSG00000196378, ZNF34, zinc finger protein 34, [Score=103, Expect=2e-22]} {Mouse: ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=111, Expect=1e-24]; ENSMUSG00000063281, Zfp35, zinc finger protein 35, [Score=110, Expect=8e-25]; ENSMUSG00000051977, Prdm9, PR domain containing 9, [Score=108, Expect=4e-24]; ENSMUSG00000062012, Zfp13, zinc finger protein 13, [Score=107, Expect=5e-24]; ENSMUSG00000006720, Zfp184, zinc finger protein 184 (Kruppel-like), [Score=106, Expect=3e-23]; ENSMUSG00000021327, Zkscan3, zinc finger with KRAB and SCAN domains 3, [Score=106, Expect=1e-23]; ENSMUSG00000020335, Zfp354b, zinc finger protein 354B, [Score=106, Expect=2e-23]; ENSMUSG00000028389, Zfp37, zinc finger protein 37, [Score=106, Expect=2e-23]} {Dmel: FBgn0038301, CG6654, [Score=99.4, Expect=2e-21]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=77.0, Expect=2e-14]} {Smed: dd_Smed_v6_2890_0_1, dd_Smed_v6_2890_0_1, [RH, Score=395, Expect=5e-128]} {RNA1509_39784, RNA1509_41416} {RNA1310_6870, RNA1509_39784, RNA1509_41416} {RNA1509_39784, RNA1509_41416, RNA815_1311.1} |
| 2. | MligTC455_51505 | 806 | 16.78 | Mlig455_030147 | Neo: - Age: logFC(26M/2M)=-0.256 |
DTX3L | 1.779 | - | - | - | 0.818 | 0.961 | - | Mlig455_030147 {REF} {Length: 3045} {Pfam: Deltex C-terminal domain [PF18102.3, score=135.2]} {Human: ENSG00000163840, DTX3L, deltex E3 ubiquitin ligase 3L, [Score=128, Expect=4e-30]; ENSG00000178498, DTX3, deltex E3 ubiquitin ligase 3, [Score=128, Expect=7e-32]} {Mouse: ENSMUSG00000040415, Dtx3, deltex 3, E3 ubiquitin ligase, [Score=129, Expect=2e-32]; ENSMUSG00000049502, Dtx3l, deltex 3-like, E3 ubiquitin ligase, [Score=129, Expect=1e-30]} {Dmel: FBgn0000524, dx, deltex, [Score=79.0, Expect=7e-15]} {RNA1509_27510, RNA1509_5594} {RNA1310_5119.1, RNA1509_27510, RNA1509_5594} {RNA1509_27510, RNA1509_5594, RNA815_4008} |
| 3. | MligTC455_53399 | 1311 | 27.32 | Mlig455_000624 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.239 Region-enriched R5: 1.186/0.00070 |
NOP14 | 1.769 | - | 0.804 | - | 0.965 | - | - | Mlig455_000624 {REF} {Length: 2599} {Pfam: Nop14-like family [PF04147.14, score=120.8]} {Human: ENSG00000087269, NOP14, NOP14 nucleolar protein, [RH, Score=87.0, Expect=4e-17]} {Mouse: ENSMUSG00000036693, Nop14, NOP14 nucleolar protein, [RH, Score=95.1, Expect=1e-19]} {Dmel: FBgn0010926, l(3)07882, lethal (3) 07882, [RH, Score=77.0, Expect=3e-14]} {Celegans: WBGene00021660, Y48G1A.4, [Score=52.4, Expect=1e-06]} {RNA1509_3372, RNA1509_40021} {RNA1310_10635.2, RNA1509_3372, RNA1509_40021} {RNA1509_3372, RNA1509_40021, RNA815_9085} |
| 4. | MligTC455_44893 | 215 | 4.47 | Mlig455_020672 | Neo: Irradiation Age: - |
SMARCC2 | 1.723 | 0.765 | - | - | 0.958 | - | - | Mlig455_020672 {REF} {Length: 2246} {TRANSSPLICED} {Pfam: SWIRM domain [PF04433.19, score=107.7]; SWIRM-associated region 1 [PF16495.7, score=79.7]; SWIRM-associated domain at the C-terminal [PF16498.7, score=49.2]; Myb-like DNA-binding domain [PF00249.33, score=42.7]; Myb-like DNA-binding domain [PF13921.8, score=28.7]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [RH, Score=450, Expect=3e-144]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [RH, Score=451, Expect=8e-146]} {Dmel: FBgn0002783, mor, moira, [RH, Score=339, Expect=3e-103]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [RH, Score=331, Expect=1e-103]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [RH, Score=405, Expect=2e-127]} {RNA1509_39768, RNA1509_54926} {RNA1310_5494.1, RNA1509_39768, RNA1509_54926} {RNA1509_39768, RNA1509_54926, RNA815_8217} |
| 5. | MligTC455_20513 | 1037 | 21.6 | Mlig455_008960 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.261 Region-enriched R5: 1.246/0.00187 Regeneration-enriched BL: 1.969 |
RPA1 | 1.703 | - | - | - | 0.952 | 0.751 | - | Mlig455_008960 {REF} {Length: 2366} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=154.7]; Replication protein A OB domain [PF16900.7, score=113.5]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=58.4]; OB-fold nucleic acid binding domain [PF01336.27, score=53.1]; Cell division control protein 24, OB domain 3 [PF17244.4, score=29.2]} {Human: ENSG00000132383, RPA1, replication protein A1, [RH, Score=486, Expect=3e-165]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [RH, Score=480, Expect=1e-162]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [RH, Score=441, Expect=8e-148]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [RH, Score=219, Expect=1e-62]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [RH, Score=416, Expect=4e-139]} {RNA1509_51558} {RNA1310_7820.2, RNA1509_51558} {RNA1509_51558, RNA815_3419} |
| 6. | MligTC455_21491 | 708 | 14.74 | Mlig455_002487, Mlig455_002679 | Neo: - Age: - |
DDX24 | 1.695 | 0.745 | - | - | - | - | 0.950 | Mlig455_002487 {REF} {Length: 3216} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=139.5]; Helicase conserved C-terminal domain [PF00271.33, score=90.5]} {Human: ENSG00000089737, DDX24, DEAD-box helicase 24, [RH, Score=350, Expect=3e-109]; ENSG00000273761, DDX24, DEAD-box helicase 24, [RH, Score=350, Expect=3e-109]} {Mouse: ENSMUSG00000041645, Ddx24, DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, [RH, Score=347, Expect=9e-108]} {Dmel: FBgn0034496, CG9143, [RH, Score=366, Expect=2e-115]} {Celegans: WBGene00018890, F55F8.2, [RH, Score=250, Expect=8e-73]} {Smed: dd_Smed_v6_7310_0_1, dd_Smed_v6_7310_0_1, [RH, Score=372, Expect=3e-120]} {RNA1509_49385, RNA1509_8890} {RNA1310_5098.1, RNA1509_49385, RNA1509_8890} {RNA1509_49385, RNA1509_8890, RNA815_5786} Mlig455_002679 {REF} {Length: 3467} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=140.2]; Helicase conserved C-terminal domain [PF00271.33, score=90.5]} {Human: ENSG00000089737, DDX24, DEAD-box helicase 24, [RH, Score=351, Expect=2e-109]; ENSG00000273761, DDX24, DEAD-box helicase 24, [RH, Score=351, Expect=2e-109]} {Mouse: ENSMUSG00000041645, Ddx24, DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, [RH, Score=347, Expect=3e-108]} {Dmel: FBgn0034496, CG9143, [RH, Score=366, Expect=1e-115]} {Celegans: WBGene00018890, F55F8.2, [RH, Score=250, Expect=1e-72]} {Smed: dd_Smed_v6_7310_0_1, dd_Smed_v6_7310_0_1, [RH, Score=373, Expect=2e-120]} {RNA1509_8890} {RNA1310_5098.1} {RNA815_5786} |
| 7. | MligTC455_04204 | 293 | 6.11 | Mlig455_005956 | Neo: - Age: Down-Up-Up |
ZNF569 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_005956 {REF} {Length: 4556} {Pfam: C2H2-type zinc finger [PF13894.8, score=70.9]; Zinc finger, C2H2 type [PF00096.28, score=48.6]; Zinc-finger double domain [PF13465.8, score=27.7]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=27.2]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=20.9]; Zinc-fingers and homeoboxes C2H2 finger domain [PF18387.3, score=20.5]} {Human: ENSG00000196437, ZNF569, zinc finger protein 569, [Score=80.1, Expect=8e-15]} {Mouse: ENSMUSG00000096916, Zfp850, zinc finger protein 850, [Score=77.0, Expect=5e-14]; ENSMUSG00000033669, Zfp7, zinc finger protein 7, [Score=73.6, Expect=7e-13]} {Dmel: FBgn0037120, CG11247, [Score=50.8, Expect=4e-06]} {Smed: dd_Smed_v6_10676_0_1, dd_Smed_v6_10676_0_1, [Score=52.8, Expect=4e-07]} {RNA1509_25692} {RNA1310_4035.1} {RNA815_2236} |
| 8. | MligTC455_26485 | 1568 | 32.66 | Mlig455_002056, Mlig455_060890 | Neo: - Age: - |
ABCB7 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_002056 {REF} {Length: 3265} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region [PF00664.25, score=106.7]} {Human: ENSG00000131269, ABCB7, ATP binding cassette subfamily B member 7, [Score=375, Expect=5e-121]} {Mouse: ENSMUSG00000031333, Abcb7, ATP-binding cassette, sub-family B (MDR/TAP), member 7, [Score=369, Expect=9e-118]} {Dmel: FBgn0035244, ABCB7, ATP binding cassette subfamily B member 7, [Score=355, Expect=9e-113]} {Celegans: WBGene00022281, abtm-1, ABC Transporter, Mitochondrial, [Score=345, Expect=3e-109]} {Smed: dd_Smed_v6_6005_0_1, dd_Smed_v6_6005_0_1, [Score=358, Expect=4e-115]} {RNA1509_5332} {RNA1310_8149.1} {RNA815_3013} Mlig455_060890 {REF} {Length: 3295} {Pfam: ABC transporter transmembrane region [PF00664.25, score=115.3]; ABC transporter [PF00005.29, score=114.8]; RecF/RecN/SMC N terminal domain [PF02463.21, score=31.8]} {Human: ENSG00000131269, ABCB7, ATP binding cassette subfamily B member 7, [RH, Score=748, Expect=0.0]} {Mouse: ENSMUSG00000031333, Abcb7, ATP-binding cassette, sub-family B (MDR/TAP), member 7, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0035244, ABCB7, ATP binding cassette subfamily B member 7, [RH, Score=713, Expect=0.0]} {Celegans: WBGene00022281, abtm-1, ABC Transporter, Mitochondrial, [RH, Score=709, Expect=0.0]} {Smed: dd_Smed_v6_6005_0_2, dd_Smed_v6_6005_0_2, [RH, Score=735, Expect=0.0]} {RNA1509_5332, RNA1509_56336} {RNA1310_8149.1, RNA1509_5332, RNA1509_56336} {RNA1509_5332, RNA1509_56336, RNA815_3013} |
| 9. | MligTC455_26484 | 740 | 15.42 | Mlig455_001957 | Neo: - Age: - |
ABCB7 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_001957 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=113.5]; ABC transporter transmembrane region [PF00664.25, score=112.2]; RecF/RecN/SMC N terminal domain [PF02463.21, score=30.7]} {Human: ENSG00000131269, ABCB7, ATP binding cassette subfamily B member 7, [RH, Score=747, Expect=0.0]} {Mouse: ENSMUSG00000031333, Abcb7, ATP-binding cassette, sub-family B (MDR/TAP), member 7, [RH, Score=737, Expect=0.0]} {Dmel: FBgn0035244, ABCB7, ATP binding cassette subfamily B member 7, [RH, Score=715, Expect=0.0]} {Celegans: WBGene00022281, abtm-1, ABC Transporter, Mitochondrial, [RH, Score=702, Expect=0.0]} {Smed: dd_Smed_v6_6005_0_2, dd_Smed_v6_6005_0_2, [RH, Score=735, Expect=0.0]} {RNA1509_5332} {RNA1310_8149.1} {RNA815_3013} |
| 10. | MligTC455_41861 | 365 | 7.6 | Mlig455_057112 | Neo: - Age: - |
FNBP4 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_057112 {REF} {Length: 2192} {TRANSSPLICED} {Pfam: WW domain [PF00397.28, score=21.9]} {Human: ENSG00000285182, FNBP4, formin binding protein 4, [RH, Score=64.3, Expect=4e-10]; ENSG00000109920, FNBP4, formin binding protein 4, [RH, Score=64.3, Expect=4e-10]} {Mouse: ENSMUSG00000008200, Fnbp4, formin binding protein 4, [RH, Score=63.9, Expect=4e-10]} {RNA1509_59255} {RNA1310_19620, RNA1509_59255} {RNA1509_59255, RNA815_31666} |
| 11. | MligTC455_33775 | 215 | 4.48 | Mlig455_016306 | Neo: Int S/G2/M Age: - |
0.954 | - | - | - | 0.954 | - | - | Mlig455_016306 {REF} {Length: 819} {NoTransDecoderORF} {RNA1509_41593} {RNA1310_36542.1} {RNA815_18422.1} |
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