TomoSeq data search

Data search

Results for MligTC455_36564

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36564

62

1.29

Mlig455_045290

Neo: -

Age: Down-Down-Up

ZNF792

Mlig455_045290 {REF} {Length: 2833} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=78.5]; C2H2-type zinc finger [PF13894.8, score=64.1]; Zinc-finger double domain [PF13465.8, score=37.6]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=25.3]; C2H2-type zinc finger [PF13912.8, score=19.2]} {Human: ENSG00000180884, ZNF792, zinc finger protein 792, [Score=108, Expect=6e-24]; ENSG00000213799, ZNF845, zinc finger protein 845, [Score=106, Expect=5e-23]; ENSG00000171970, ZNF57, zinc finger protein 57, [Score=105, Expect=3e-23]; ENSG00000179930, ZNF648, zinc finger protein 648, [Score=105, Expect=4e-23]; ENSG00000179909, ZNF154, zinc finger protein 154, [Score=105, Expect=1e-23]; ENSG00000122386, ZNF205, zinc finger protein 205, [Score=105, Expect=4e-23]; ENSG00000062370, ZNF112, zinc finger protein 112, [Score=104, Expect=1e-22]; ENSG00000198482, ZNF808, zinc finger protein 808, [Score=104, Expect=2e-22]; ENSG00000196378, ZNF34, zinc finger protein 34, [Score=104, Expect=1e-22]; ENSG00000251247, ZNF345, zinc finger protein 345, [Score=103, Expect=7e-23]} {Mouse: ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=110, Expect=1e-24]; ENSMUSG00000051977, Prdm9, PR domain containing 9, [Score=108, Expect=6e-24]; ENSMUSG00000063281, Zfp35, zinc finger protein 35, [Score=108, Expect=3e-24]; ENSMUSG00000062012, Zfp13, zinc finger protein 13, [Score=107, Expect=5e-24]; ENSMUSG00000020335, Zfp354b, zinc finger protein 354B, [Score=107, Expect=1e-23]; ENSMUSG00000002266, Zim1, zinc finger, imprinted 1, [Score=107, Expect=6e-24]; ENSMUSG00000021327, Zkscan3, zinc finger with KRAB and SCAN domains 3, [Score=106, Expect=2e-23]; ENSMUSG00000006720, Zfp184, zinc finger protein 184 (Kruppel-like), [Score=106, Expect=3e-23]; ENSMUSG00000074867, Zfp808, zinc finger protein 808, [Score=106, Expect=2e-23]; ENSMUSG00000028389, Zfp37, zinc finger protein 37, [Score=105, Expect=3e-23]; ENSMUSG00000094942, Gm3604, predicted gene 3604, [Score=105, Expect=2e-23]; ENSMUSG00000091474, 2610021A01Rik, RIKEN cDNA 2610021A01 gene, [Score=105, Expect=4e-23]} {Dmel: FBgn0038301, CG6654, [Score=99.0, Expect=3e-21]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=76.6, Expect=3e-14]} {Smed: dd_Smed_v6_2890_0_1, dd_Smed_v6_2890_0_1, [RH, Score=395, Expect=5e-128]} {RNA1509_3190} {RNA1310_6870} {RNA815_1311.1}

Cumulative graph for MligTC455_36564

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.198	1.592	1.00000	1.00000
RegionR2	-5.226	1.592	0.99989	1.00000
RegionR3	-1.055	1.592	0.99989	1.00000
RegionR4	6.937	1.592	0.99983	1.00000
RegionR5	3.231	1.592	0.99977	1.00000
RegionR6	0.262	1.592	1.00000	1.00000
RegionR7	-0.475	1.592	1.00000	1.00000
RegionR8	0.524	1.592	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	4.122	1.592	1.00000	1.00000
RegenerationR2	5.174	1.592	0.00010	0.01190
RegenerationR3	2.757	1.592	0.06275	0.42285
RegenerationR4	0.665	1.592	0.29510	0.73805
RegenerationR5	0.726	1.592	0.27645	0.70547
RegenerationR6	3.322	1.592	0.10341	0.39849
RegenerationBL	2.164	1.592	0.27981	0.64054
RegenerationTP	-2.913	1.592	0.99995	1.00000

Genes with expression patterns similar to MligTC455_36564

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36564	62	1.29	Mlig455_045290	Neo: - Age: Down-Down-Up	ZNF792	3	-	-	-	1.000	1.000	1.000	Mlig455_045290 {REF} {Length: 2833} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=78.5]; C2H2-type zinc finger [PF13894.8, score=64.1]; Zinc-finger double domain [PF13465.8, score=37.6]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=25.3]; C2H2-type zinc finger [PF13912.8, score=19.2]} {Human: ENSG00000180884, ZNF792, zinc finger protein 792, [Score=108, Expect=6e-24]; ENSG00000213799, ZNF845, zinc finger protein 845, [Score=106, Expect=5e-23]; ENSG00000171970, ZNF57, zinc finger protein 57, [Score=105, Expect=3e-23]; ENSG00000179930, ZNF648, zinc finger protein 648, [Score=105, Expect=4e-23]; ENSG00000179909, ZNF154, zinc finger protein 154, [Score=105, Expect=1e-23]; ENSG00000122386, ZNF205, zinc finger protein 205, [Score=105, Expect=4e-23]; ENSG00000062370, ZNF112, zinc finger protein 112, [Score=104, Expect=1e-22]; ENSG00000198482, ZNF808, zinc finger protein 808, [Score=104, Expect=2e-22]; ENSG00000196378, ZNF34, zinc finger protein 34, [Score=104, Expect=1e-22]; ENSG00000251247, ZNF345, zinc finger protein 345, [Score=103, Expect=7e-23]} {Mouse: ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=110, Expect=1e-24]; ENSMUSG00000051977, Prdm9, PR domain containing 9, [Score=108, Expect=6e-24]; ENSMUSG00000063281, Zfp35, zinc finger protein 35, [Score=108, Expect=3e-24]; ENSMUSG00000062012, Zfp13, zinc finger protein 13, [Score=107, Expect=5e-24]; ENSMUSG00000020335, Zfp354b, zinc finger protein 354B, [Score=107, Expect=1e-23]; ENSMUSG00000002266, Zim1, zinc finger, imprinted 1, [Score=107, Expect=6e-24]; ENSMUSG00000021327, Zkscan3, zinc finger with KRAB and SCAN domains 3, [Score=106, Expect=2e-23]; ENSMUSG00000006720, Zfp184, zinc finger protein 184 (Kruppel-like), [Score=106, Expect=3e-23]; ENSMUSG00000074867, Zfp808, zinc finger protein 808, [Score=106, Expect=2e-23]; ENSMUSG00000028389, Zfp37, zinc finger protein 37, [Score=105, Expect=3e-23]; ENSMUSG00000094942, Gm3604, predicted gene 3604, [Score=105, Expect=2e-23]; ENSMUSG00000091474, 2610021A01Rik, RIKEN cDNA 2610021A01 gene, [Score=105, Expect=4e-23]} {Dmel: FBgn0038301, CG6654, [Score=99.0, Expect=3e-21]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=76.6, Expect=3e-14]} {Smed: dd_Smed_v6_2890_0_1, dd_Smed_v6_2890_0_1, [RH, Score=395, Expect=5e-128]} {RNA1509_3190} {RNA1310_6870} {RNA815_1311.1}
2.	MligTC455_50512	131	2.73	Mlig455_039758	Neo: - Age: -	HDAC11	1.718	-	-	-	0.758	-	0.960	Mlig455_039758 {REF} {Length: 3090} {TRANSSPLICED} {Pfam: Histone deacetylase domain [PF00850.21, score=139.2]} {Human: ENSG00000163517, HDAC11, histone deacetylase 11, [Score=301, Expect=2e-101]} {Mouse: ENSMUSG00000034245, Hdac11, histone deacetylase 11, [Score=303, Expect=3e-102]} {Dmel: FBgn0051119, HDAC11, Histone deacetylase 11, [Score=270, Expect=2e-89]} {Celegans: WBGene00007953, hda-11, Histone DeAcetylase, [Score=252, Expect=1e-82]} {Smed: dd_Smed_v6_3401_0_4, dd_Smed_v6_3401_0_4, [Score=244, Expect=2e-79]} {RNA1310_29298} {RNA815_14482}
3.	MligTC455_16441	135	2.81	Mlig455_014225	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_014225 {REF} {Length: 1608} {TRANSSPLICED} {RNA1310_47159} {RNA815_38688}
4.	MligTC455_25394	108	2.25	Mlig455_029037	Neo: - Age: Down-Up-Up	SETMAR	0.969	-	-	-	-	-	0.969	Mlig455_029037 {REF} {Length: 4237} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=79.6]; Transposase (partial DDE domain) [PF01359.20, score=45.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=45.1]; HTH domain in Mos1 transposase [PF17906.3, score=35.2]; Homeodomain-like domain [PF13565.8, score=30.7]; Winged helix-turn helix [PF13551.8, score=22.7]; AsnC-type helix-turn-helix domain [PF13404.8, score=21.3]; Transposase [PF01498.20, score=20.9]; Winged helix-turn-helix DNA-binding [PF13412.8, score=20.2]; Homeodomain-like domain [PF13384.8, score=18.7]; Prokaryotic RING finger family 4 [PF14447.8, score=18.4]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=138, Expect=1e-33]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [Score=109, Expect=1e-24]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [RH, Score=134, Expect=6e-33]} {Celegans: WBGene00017342, F10D7.5, [Score=50.8, Expect=3e-06]} {Smed: dd_Smed_v6_4626_0_1, dd_Smed_v6_4626_0_1, [RH, Score=67.4, Expect=1e-11]} {RNA1509_10778} {RNA1310_2992.1} {RNA815_964.1}
5.	MligTC455_48194	103	2.14	Mlig455_007604	Neo: - Age: Down-Up-Down	NR6A1	0.967	-	-	-	-	0.967	-	Mlig455_007604 {REF} {Length: 3309} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=95.6]} {Human: ENSG00000148200, NR6A1, nuclear receptor subfamily 6 group A member 1, [RH, Score=119, Expect=1e-27]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [RH, Score=120, Expect=4e-28]} {Dmel: FBgn0264562, Hr4, Hormone receptor 4, [RH, Score=152, Expect=3e-37]} {Celegans: WBGene00003681, nhr-91, Nuclear hormone receptor family member nhr-91, [RH, Score=143, Expect=3e-36]} {Smed: dd_Smed_v6_7551_0_1, dd_Smed_v6_7551_0_1, [RH, Score=124, Expect=6e-29]} {RNA1509_26996} {RNA1310_14750} {RNA815_15298}
6.	MligTC455_14185	59	1.23	Mlig455_049747	Neo: - Age: Down-Up-Down		0.965	-	-	-	-	-	0.965	Mlig455_049747 {REF} {Length: 1185} {RNA1310_45179} {RNA815_26547}
7.	MligTC455_36548	178	3.71	Mlig455_068923	Neo: - Age: Up-Down-Up Region-enriched R7: 2.837/0.00002	PRKD3	0.963	-	-	-	-	-	0.963	Mlig455_068923 {REF} {Length: 3375} {Pfam: Protein kinase domain [PF00069.27, score=233.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.1]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=86.5]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=23.8]; C1 domain [PF03107.18, score=21.7]} {Human: ENSG00000115825, PRKD3, protein kinase D3, [RH, Score=714, Expect=0.0]; ENSG00000184304, PRKD1, protein kinase D1, [RH, Score=706, Expect=0.0]; ENSG00000105287, PRKD2, protein kinase D2, [RH, Score=688, Expect=0.0]} {Mouse: ENSMUSG00000024070, Prkd3, protein kinase D3, [RH, Score=717, Expect=0.0]; ENSMUSG00000002688, Prkd1, protein kinase D1, [RH, Score=701, Expect=0.0]} {Dmel: FBgn0038603, PKD, Protein Kinase D, [RH, Score=637, Expect=0.0]} {Celegans: WBGene00012019, dkf-2, Serine/threonine-protein kinase dkf-2, [RH, Score=687, Expect=0.0]} {Smed: dd_Smed_v6_6620_0_1, dd_Smed_v6_6620_0_1, [Score=169, Expect=2e-45]} {RNA1509_31101} {RNA1310_7782, RNA1509_31101} {RNA1509_31101, RNA815_11060}
8.	MligTC455_56331	5	0.11	Mlig455_032692	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_032692 {REF} {Length: 619} {NoTransDecoderORF}
9.	MligTC455_15722	22	0.45	Mlig455_008745	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_008745 {REF} {Length: 2568} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=33.2]} {Smed: dd_Smed_v6_31564_0_1, dd_Smed_v6_31564_0_1, [Score=75.1, Expect=4e-15]} {RNA1310_22173} {RNA815_13769}
10.	MligTC455_48400	43	0.89	Mlig455_041707	Neo: - Age: Up-Down-Up	NOTCH2	0.961	-	-	-	-	-	0.961	Mlig455_041707 {REF} {Length: 5304} {Pfam: EGF-like domain [PF00008.29, score=130.8]; LNR domain [PF00066.19, score=92.2]; Human growth factor-like EGF [PF12661.9, score=79.8]; Calcium-binding EGF domain [PF07645.17, score=46.8]; EGF-like domain [PF07974.15, score=21.5]; NOTCH protein [PF07684.14, score=20.9]; Transcriptional activator LAG-3 [PF11498.10, score=20.2]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=285, Expect=1e-78]; ENSG00000148400, NOTCH1, notch 1, [Score=280, Expect=4e-77]; ENSG00000074181, NOTCH3, notch 3, [Score=273, Expect=7e-75]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=288, Expect=5e-80]; ENSMUSG00000038146, Notch3, notch 3, [Score=285, Expect=6e-79]; ENSMUSG00000027878, Notch2, notch 2, [Score=283, Expect=4e-78]} {Dmel: FBgn0004647, N, Notch, [Score=269, Expect=1e-73]} {Celegans: WBGene00003001, lin-12, [RH, Score=229, Expect=3e-61]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=267, Expect=2e-73]} {RNA1310_37322} {RNA815_20315}
11.	MligTC455_20902	110	2.3	Mlig455_011710	Neo: - Age: logFC(26M/2M)=0.245	SLC4A10	0.96	-	-	-	-	0.960	-	Mlig455_011710 {REF} {Length: 4288} {TRANSSPLICED} {Pfam: HCO3- transporter family [PF00955.23, score=710.7]; Band 3 cytoplasmic domain [PF07565.15, score=281.4]} {Human: ENSG00000144290, SLC4A10, solute carrier family 4 member 10, [RH, Score=951, Expect=0.0]} {Mouse: ENSMUSG00000021733, Slc4a7, solute carrier family 4, sodium bicarbonate cotransporter, member 7, [RH, Score=944, Expect=0.0]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [Score=647, Expect=0.0]} {Celegans: WBGene00009920, abts-1, Anion exchange protein, [Score=601, Expect=0.0]} {Smed: dd_Smed_v6_3003_0_2, dd_Smed_v6_3003_0_2, [RH, Score=1197, Expect=0.0]} {RNA1509_5194} {RNA1310_6943} {RNA815_5130}
12.	MligTC455_46378	582	12.12	Mlig455_040684	Neo: Int S/G2/M Age: Up-Down-Up, logFC(26M/2M)=0.474	COPS5	0.96	-	-	-	0.960	-	-	Mlig455_040684 {REF} {Length: 1700} {TRANSSPLICED} {Pfam: JAB1/Mov34/MPN/PAD-1 ubiquitin protease [PF01398.23, score=100.5]; Cop9 signalosome subunit 5 C-terminal domain [PF18323.3, score=41.9]; Prokaryotic homologs of the JAB domain [PF14464.8, score=20.9]} {Human: ENSG00000121022, COPS5, COP9 signalosome subunit 5, [RH, Score=383, Expect=4e-133]} {Mouse: ENSMUSG00000025917, Cops5, COP9 signalosome subunit 5, [RH, Score=383, Expect=3e-133]} {Dmel: FBgn0027053, CSN5, COP9 signalosome subunit 5, [RH, Score=401, Expect=1e-140]} {Celegans: WBGene00000817, csn-5, COP9 signalosome complex subunit 5, [RH, Score=344, Expect=1e-117]} {Smed: dd_Smed_v6_2781_0_1, dd_Smed_v6_2781_0_1, [RH, Score=355, Expect=2e-122]} {RNA1509_9443} {RNA1310_23567} {RNA815_13412}
13.	MligTC455_32076	319	6.65	Mlig455_058401	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_058401 {REF} {Length: 1003} {Pfam: Homeodomain-like domain [PF13384.8, score=33.5]; Helix-turn-helix domain [PF13936.8, score=33.4]; Helix-turn-helix domain of resolvase [PF02796.17, score=25.9]; Helix-turn-helix domain [PF13518.8, score=23.6]; Winged helix-turn helix [PF13551.8, score=22.4]; Tc3 transposase [PF11427.10, score=21.0]; 'Paired box' domain [PF00292.20, score=19.9]} {RNA1509_49032} {RNA1310_37860, RNA1509_49032} {RNA1509_49032, RNA815_36697}
14.	MligTC455_12794	32	0.67	Mlig455_052083	Neo: - Age: logFC(26M/2M)=-0.315	CSNK1D	0.957	-	-	-	-	-	0.957	Mlig455_052083 {REF} {Length: 2825} {Pfam: Protein kinase domain [PF00069.27, score=97.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=58.1]; Fungal protein kinase [PF17667.3, score=29.9]; Phosphotransferase enzyme family [PF01636.25, score=21.1]} {Human: ENSG00000141551, CSNK1D, casein kinase 1 delta, [RH, Score=578, Expect=0.0]; ENSG00000283900, TPTEP2-CSNK1E, TPTEP2-CSNK1E readthrough, [RH, Score=573, Expect=0.0]; ENSG00000213923, CSNK1E, casein kinase 1 epsilon, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000025162, Csnk1d, casein kinase 1, delta, [RH, Score=578, Expect=0.0]; ENSMUSG00000022433, Csnk1e, casein kinase 1, epsilon, [RH, Score=574, Expect=0.0]} {Dmel: FBgn0002413, dco, discs overgrown, [RH, Score=529, Expect=0.0]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [RH, Score=499, Expect=1e-176]} {Smed: dd_Smed_v6_4561_0_1, dd_Smed_v6_4561_0_1, [RH, Score=577, Expect=0.0]} {RNA1509_19984, RNA1509_33497} {RNA1310_23975, RNA1509_19984, RNA1509_33497} {RNA1509_19984, RNA1509_33497, RNA815_12595}
15.	MligTC455_35275	40	0.84	Mlig455_039117	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_039117 {REF} {Length: 2535} {RNA1310_18660} {RNA815_15449}
16.	MligTC455_14958	12	0.26	Mlig455_069448	Neo: - Age: -		0.954	-	-	-	-	-	0.954	Mlig455_069448 {REF} {Length: 899} {Smed: dd_Smed_v6_9265_0_1, dd_Smed_v6_9265_0_1, [Score=97.4, Expect=9e-24]} {RNA1310_70933}
17.	MligTC455_32742	187	3.9	Mlig455_064981	Neo: - Age: - Region-enriched R4: 2.677/0.04748	KY	0.954	-	-	-	0.954	-	-	Mlig455_064981 {REF} {Length: 6268} {TRANSSPLICED} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=33.7]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=127, Expect=9e-30]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=131, Expect=6e-31]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=220, Expect=2e-59]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=204, Expect=8e-57]} {Smed: dd_Smed_v6_1846_0_1, dd_Smed_v6_1846_0_1, [Score=461, Expect=1e-147]} {RNA1509_1987} {RNA1310_669} {RNA815_5918.1}
18.	MligTC455_37951	43	0.89	Mlig455_024421	Neo: - Age: Up-Down-Up		0.953	-	-	-	-	0.953	-	Mlig455_024421 {REF} {Length: 2862} {Mouse: ENSMUSG00000000884, Gnb1l, guanine nucleotide binding protein (G protein), beta polypeptide 1-like, [Score=40.8, Expect=1e-05]} {RNA1509_25342} {RNA1310_63202, RNA1509_25342} {RNA1509_25342, RNA815_60281}

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