TomoSeq data search

Data search

Results for MligTC455_36612

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_36612	54911	1143.98	Mlig455_039135, Mlig455_051684	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.245	RPS4X	Mlig455_039135 {REF} {Length: 997} {TRANSSPLICED} {Pfam: Ribosomal family S4e [PF00900.22, score=115.2]; 40S ribosomal protein S4 C-terminus [PF16121.7, score=93.2]; RS4NT (NUC023) domain [PF08071.14, score=66.7]; KOW motif [PF00467.31, score=29.3]} {Human: ENSG00000198034, RPS4X, ribosomal protein S4 X-linked, [RH, Score=399, Expect=8e-142]; ENSG00000129824, RPS4Y1, ribosomal protein S4 Y-linked 1, [RH, Score=388, Expect=2e-137]} {Mouse: ENSMUSG00000031320, Rps4x, ribosomal protein S4, X-linked, [RH, Score=399, Expect=5e-142]} {Dmel: FBgn0011284, RpS4, Ribosomal protein S4, [RH, Score=372, Expect=3e-131]} {Celegans: WBGene00004473, rps-4, 40S ribosomal protein S4, [RH, Score=342, Expect=1e-119]} {Smed: dd_Smed_v6_82_0_1, dd_Smed_v6_82_0_1, [RH, Score=333, Expect=2e-116]} {RNA1509_116} {RNA1310_35395} {RNA815_15889.2} Mlig455_051684 {REF} {Length: 997} {TRANSSPLICED} {Pfam: Ribosomal family S4e [PF00900.22, score=115.2]; 40S ribosomal protein S4 C-terminus [PF16121.7, score=93.2]; RS4NT (NUC023) domain [PF08071.14, score=66.7]; KOW motif [PF00467.31, score=29.3]} {Human: ENSG00000198034, RPS4X, ribosomal protein S4 X-linked, [RH, Score=399, Expect=8e-142]; ENSG00000129824, RPS4Y1, ribosomal protein S4 Y-linked 1, [RH, Score=388, Expect=2e-137]} {Mouse: ENSMUSG00000031320, Rps4x, ribosomal protein S4, X-linked, [RH, Score=399, Expect=5e-142]} {Dmel: FBgn0011284, RpS4, Ribosomal protein S4, [RH, Score=372, Expect=3e-131]} {Celegans: WBGene00004473, rps-4, 40S ribosomal protein S4, [RH, Score=342, Expect=1e-119]} {Smed: dd_Smed_v6_82_0_1, dd_Smed_v6_82_0_1, [RH, Score=333, Expect=2e-116]} {RNA1509_116, RNA1509_37486} {RNA1310_35395, RNA1509_116, RNA1509_37486} {RNA1509_116, RNA1509_37486, RNA815_15889.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36612

54911

1143.98

Mlig455_039135, Mlig455_051684

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.245

RPS4X

Mlig455_039135 {REF} {Length: 997} {TRANSSPLICED} {Pfam: Ribosomal family S4e [PF00900.22, score=115.2]; 40S ribosomal protein S4 C-terminus [PF16121.7, score=93.2]; RS4NT (NUC023) domain [PF08071.14, score=66.7]; KOW motif [PF00467.31, score=29.3]} {Human: ENSG00000198034, RPS4X, ribosomal protein S4 X-linked, [RH, Score=399, Expect=8e-142]; ENSG00000129824, RPS4Y1, ribosomal protein S4 Y-linked 1, [RH, Score=388, Expect=2e-137]} {Mouse: ENSMUSG00000031320, Rps4x, ribosomal protein S4, X-linked, [RH, Score=399, Expect=5e-142]} {Dmel: FBgn0011284, RpS4, Ribosomal protein S4, [RH, Score=372, Expect=3e-131]} {Celegans: WBGene00004473, rps-4, 40S ribosomal protein S4, [RH, Score=342, Expect=1e-119]} {Smed: dd_Smed_v6_82_0_1, dd_Smed_v6_82_0_1, [RH, Score=333, Expect=2e-116]} {RNA1509_116} {RNA1310_35395} {RNA815_15889.2}

Mlig455_051684 {REF} {Length: 997} {TRANSSPLICED} {Pfam: Ribosomal family S4e [PF00900.22, score=115.2]; 40S ribosomal protein S4 C-terminus [PF16121.7, score=93.2]; RS4NT (NUC023) domain [PF08071.14, score=66.7]; KOW motif [PF00467.31, score=29.3]} {Human: ENSG00000198034, RPS4X, ribosomal protein S4 X-linked, [RH, Score=399, Expect=8e-142]; ENSG00000129824, RPS4Y1, ribosomal protein S4 Y-linked 1, [RH, Score=388, Expect=2e-137]} {Mouse: ENSMUSG00000031320, Rps4x, ribosomal protein S4, X-linked, [RH, Score=399, Expect=5e-142]} {Dmel: FBgn0011284, RpS4, Ribosomal protein S4, [RH, Score=372, Expect=3e-131]} {Celegans: WBGene00004473, rps-4, 40S ribosomal protein S4, [RH, Score=342, Expect=1e-119]} {Smed: dd_Smed_v6_82_0_1, dd_Smed_v6_82_0_1, [RH, Score=333, Expect=2e-116]} {RNA1509_116, RNA1509_37486} {RNA1310_35395, RNA1509_116, RNA1509_37486} {RNA1509_116, RNA1509_37486, RNA815_15889.2}

Cumulative graph for MligTC455_36612

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.101	10.218	0.00005	0.01986
RegionR2	-0.104	10.218	0.62928	0.97046
RegionR3	0.216	10.218	0.24854	0.79220
RegionR4	0.283	10.218	0.17212	0.43663
RegionR5	0.33	10.218	0.06983	0.23783
RegionR6	0.315	10.218	0.08907	0.54974
RegionR7	0.483	10.218	0.00728	0.14102
RegionR8	-0.422	10.218	0.04042	0.39393

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.003	10.218	0.99343	1.00000
RegenerationR2	-0.236	10.218	0.33390	0.77038
RegenerationR3	-0.087	10.218	0.72457	0.95617
RegenerationR4	-0.176	10.218	0.48645	0.86223
RegenerationR5	-0.455	10.218	0.06132	0.39377
RegenerationR6	-0.28	10.218	0.25149	0.60110
RegenerationBL	-0.049	10.218	0.81470	1.00000
RegenerationTP	-0.522	10.218	0.02242	0.25496

Genes with expression patterns similar to MligTC455_36612

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36612	54911	1143.98	Mlig455_039135, Mlig455_051684	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.245	RPS4X	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039135 {REF} {Length: 997} {TRANSSPLICED} {Pfam: Ribosomal family S4e [PF00900.22, score=115.2]; 40S ribosomal protein S4 C-terminus [PF16121.7, score=93.2]; RS4NT (NUC023) domain [PF08071.14, score=66.7]; KOW motif [PF00467.31, score=29.3]} {Human: ENSG00000198034, RPS4X, ribosomal protein S4 X-linked, [RH, Score=399, Expect=8e-142]; ENSG00000129824, RPS4Y1, ribosomal protein S4 Y-linked 1, [RH, Score=388, Expect=2e-137]} {Mouse: ENSMUSG00000031320, Rps4x, ribosomal protein S4, X-linked, [RH, Score=399, Expect=5e-142]} {Dmel: FBgn0011284, RpS4, Ribosomal protein S4, [RH, Score=372, Expect=3e-131]} {Celegans: WBGene00004473, rps-4, 40S ribosomal protein S4, [RH, Score=342, Expect=1e-119]} {Smed: dd_Smed_v6_82_0_1, dd_Smed_v6_82_0_1, [RH, Score=333, Expect=2e-116]} {RNA1509_116} {RNA1310_35395} {RNA815_15889.2} Mlig455_051684 {REF} {Length: 997} {TRANSSPLICED} {Pfam: Ribosomal family S4e [PF00900.22, score=115.2]; 40S ribosomal protein S4 C-terminus [PF16121.7, score=93.2]; RS4NT (NUC023) domain [PF08071.14, score=66.7]; KOW motif [PF00467.31, score=29.3]} {Human: ENSG00000198034, RPS4X, ribosomal protein S4 X-linked, [RH, Score=399, Expect=8e-142]; ENSG00000129824, RPS4Y1, ribosomal protein S4 Y-linked 1, [RH, Score=388, Expect=2e-137]} {Mouse: ENSMUSG00000031320, Rps4x, ribosomal protein S4, X-linked, [RH, Score=399, Expect=5e-142]} {Dmel: FBgn0011284, RpS4, Ribosomal protein S4, [RH, Score=372, Expect=3e-131]} {Celegans: WBGene00004473, rps-4, 40S ribosomal protein S4, [RH, Score=342, Expect=1e-119]} {Smed: dd_Smed_v6_82_0_1, dd_Smed_v6_82_0_1, [RH, Score=333, Expect=2e-116]} {RNA1509_116, RNA1509_37486} {RNA1310_35395, RNA1509_116, RNA1509_37486} {RNA1509_116, RNA1509_37486, RNA815_15889.2}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts