Data search


search
Exact
Search

Results for MligTC455_36653

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36653 290 6.03 Mlig455_052146, Mlig455_060684

Neo: Int S/G2/M

Age: -

OSGEPL1

Mlig455_052146 {REF} {Length: 2905} {TRANSSPLICED} {Pfam: tRNA N6-adenosine threonylcarbamoyltransferase [PF00814.27, score=229.2]; Stathmin family [PF00836.21, score=27.5]} {Human: ENSG00000128694, OSGEPL1, O-sialoglycoprotein endopeptidase like 1, [RH, Score=264, Expect=3e-81]} {Mouse: ENSMUSG00000026096, Osgepl1, O-sialoglycoprotein endopeptidase-like 1, [RH, Score=270, Expect=2e-83]} {Dmel: FBgn0031060, CG14231, [RH, Score=223, Expect=3e-66]} {Celegans: WBGene00007237, C01G10.10, Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial, [RH, Score=188, Expect=4e-53]} {Smed: dd_Smed_v6_5895_0_1, dd_Smed_v6_5895_0_1, [RH, Score=159, Expect=2e-44]} {RNA1509_42829} {RNA1310_12026.1} {RNA815_7587}

Mlig455_060684 {REF} {Length: 1891} {Pfam: tRNA N6-adenosine threonylcarbamoyltransferase [PF00814.27, score=232.2]} {Human: ENSG00000128694, OSGEPL1, O-sialoglycoprotein endopeptidase like 1, [RH, Score=265, Expect=5e-84]} {Mouse: ENSMUSG00000026096, Osgepl1, O-sialoglycoprotein endopeptidase-like 1, [RH, Score=268, Expect=2e-85]} {Dmel: FBgn0031060, CG14231, [RH, Score=229, Expect=1e-70]} {Celegans: WBGene00007237, C01G10.10, Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial, [RH, Score=190, Expect=9e-56]} {Smed: dd_Smed_v6_5895_0_1, dd_Smed_v6_5895_0_1, [RH, Score=157, Expect=3e-45]} {RNA1509_42829} {RNA1310_12026.1} {RNA815_7587}

Cumulative graph for MligTC455_36653

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.012 3.015 0.35283 0.99647
RegionR2 -0.113 3.015 0.89397 1.00000
RegionR3 1.011 3.015 0.06354 0.44542
RegionR4 -0.089 3.015 0.90909 1.00000
RegionR5 1.09 3.015 0.02450 0.11215
RegionR6 0.651 3.015 0.27714 0.86753
RegionR7 -1.013 3.015 0.31317 0.94772
RegionR8 0.475 3.015 0.60315 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.355 3.015 0.70452 1.00000
RegenerationR2 0.721 3.015 0.22697 0.67469
RegenerationR3 0.683 3.015 0.23204 0.66671
RegenerationR4 1.062 3.015 0.09776 0.48503
RegenerationR5 0.812 3.015 0.10612 0.49323
RegenerationR6 0.728 3.015 0.22916 0.57492
RegenerationBL 1.526 3.015 0.04029 0.22779
RegenerationTP 1.031 3.015 0.25103 0.69841


Genes with expression patterns similar to MligTC455_36653

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36653 290 6.03 Mlig455_052146, Mlig455_060684

Neo: Int S/G2/M

Age: -

OSGEPL1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_052146 {REF} {Length: 2905} {TRANSSPLICED} {Pfam: tRNA N6-adenosine threonylcarbamoyltransferase [PF00814.27, score=229.2]; Stathmin family [PF00836.21, score=27.5]} {Human: ENSG00000128694, OSGEPL1, O-sialoglycoprotein endopeptidase like 1, [RH, Score=264, Expect=3e-81]} {Mouse: ENSMUSG00000026096, Osgepl1, O-sialoglycoprotein endopeptidase-like 1, [RH, Score=270, Expect=2e-83]} {Dmel: FBgn0031060, CG14231, [RH, Score=223, Expect=3e-66]} {Celegans: WBGene00007237, C01G10.10, Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial, [RH, Score=188, Expect=4e-53]} {Smed: dd_Smed_v6_5895_0_1, dd_Smed_v6_5895_0_1, [RH, Score=159, Expect=2e-44]} {RNA1509_42829} {RNA1310_12026.1} {RNA815_7587}

Mlig455_060684 {REF} {Length: 1891} {Pfam: tRNA N6-adenosine threonylcarbamoyltransferase [PF00814.27, score=232.2]} {Human: ENSG00000128694, OSGEPL1, O-sialoglycoprotein endopeptidase like 1, [RH, Score=265, Expect=5e-84]} {Mouse: ENSMUSG00000026096, Osgepl1, O-sialoglycoprotein endopeptidase-like 1, [RH, Score=268, Expect=2e-85]} {Dmel: FBgn0031060, CG14231, [RH, Score=229, Expect=1e-70]} {Celegans: WBGene00007237, C01G10.10, Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial, [RH, Score=190, Expect=9e-56]} {Smed: dd_Smed_v6_5895_0_1, dd_Smed_v6_5895_0_1, [RH, Score=157, Expect=3e-45]} {RNA1509_42829} {RNA1310_12026.1} {RNA815_7587}
2. MligTC455_36652 184 3.83 Mlig455_054146

Neo: -

Age: Down-Up-Down

OSGEPL1 5.739 0.984 0.990 0.957 0.975 0.867 0.966 Mlig455_054146 {REF} {Length: 2011} {TRANSSPLICED} {Pfam: tRNA N6-adenosine threonylcarbamoyltransferase [PF00814.27, score=73.8]} {Human: ENSG00000128694, OSGEPL1, O-sialoglycoprotein endopeptidase like 1, [Score=77.0, Expect=2e-15]} {Mouse: ENSMUSG00000026096, Osgepl1, O-sialoglycoprotein endopeptidase-like 1, [Score=73.9, Expect=1e-14]; ENSMUSG00000100679, Gm28778, predicted gene 28778, [Score=72.8, Expect=8e-15]} {Dmel: FBgn0031060, CG14231, [Score=68.9, Expect=5e-13]} {Celegans: WBGene00007237, C01G10.10, Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial, [Score=56.6, Expect=4e-09]} {Smed: dd_Smed_v6_5895_0_1, dd_Smed_v6_5895_0_1, [Score=75.5, Expect=4e-17]} {RNA1509_42829} {RNA1310_12026.1} {RNA815_7587}
3. MligTC455_50670 1021 21.27 Mlig455_026568

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.125/0.03562

SF3A2 2.538 0.702 - - 0.955 - 0.881 Mlig455_026568 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) [PF16835.7, score=127.4]; Zinc-finger of C2H2 type [PF12874.9, score=30.7]; Cactus-binding C-terminus of cactin protein [PF09732.11, score=19.2]} {Human: ENSG00000104897, SF3A2, splicing factor 3a subunit 2, [RH, Score=355, Expect=1e-120]} {Mouse: ENSMUSG00000020211, Sf3a2, splicing factor 3a, subunit 2, [Score=355, Expect=3e-120]} {Dmel: FBgn0036314, Sf3a2, Splicing factor 3a subunit 2, [RH, Score=377, Expect=1e-132]} {Celegans: WBGene00008683, repo-1, REversed POlarity in early embryos, [RH, Score=361, Expect=5e-127]} {Smed: dd_Smed_v6_1788_0_1, dd_Smed_v6_1788_0_1, [RH, Score=372, Expect=5e-130]} {RNA1509_34887, RNA1509_9978} {RNA1310_38332.1, RNA1509_34887} {RNA1509_34887, RNA815_9802}
4. MligTC455_40736 1800 37.51 Mlig455_041324, Mlig455_041350, Mlig455_056239

Neo: Neoblast, stringent

Age: -

Regeneration-enriched R3: 2.092
Regeneration-enriched BL: 1.703

ZMYM2 2.524 0.702 - - 0.955 - 0.867

Mlig455_041324 {REF} {Length: 2405} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=98.9]} {Human: ENSG00000121741, ZMYM2, zinc finger MYM-type containing 2, [RH, Score=171, Expect=1e-44]; ENSG00000147130, ZMYM3, zinc finger MYM-type containing 3, [RH, Score=170, Expect=3e-44]; ENSG00000146463, ZMYM4, zinc finger MYM-type containing 4, [RH, Score=164, Expect=3e-42]} {Mouse: ENSMUSG00000021945, Zmym2, zinc finger, MYM-type 2, [RH, Score=172, Expect=5e-45]; ENSMUSG00000031310, Zmym3, zinc finger, MYM-type 3, [RH, Score=169, Expect=7e-44]} {Dmel: FBgn0010328, woc, without children, [RH, Score=195, Expect=9e-54]} {Smed: dd_Smed_v6_3776_0_1, dd_Smed_v6_3776_0_1, [RH, Score=213, Expect=4e-61]} {RNA1509_1760, RNA1509_41443} {RNA1310_2174.1, RNA1509_41443} {RNA1509_41443, RNA815_21304}

Mlig455_041350 {REF} {Length: 2412} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=98.8]} {Human: ENSG00000121741, ZMYM2, zinc finger MYM-type containing 2, [RH, Score=172, Expect=1e-44]; ENSG00000147130, ZMYM3, zinc finger MYM-type containing 3, [RH, Score=171, Expect=2e-44]; ENSG00000146463, ZMYM4, zinc finger MYM-type containing 4, [RH, Score=164, Expect=3e-42]} {Mouse: ENSMUSG00000021945, Zmym2, zinc finger, MYM-type 2, [RH, Score=172, Expect=5e-45]; ENSMUSG00000031310, Zmym3, zinc finger, MYM-type 3, [RH, Score=169, Expect=7e-44]} {Dmel: FBgn0010328, woc, without children, [RH, Score=195, Expect=8e-54]} {Smed: dd_Smed_v6_3776_0_1, dd_Smed_v6_3776_0_1, [RH, Score=213, Expect=5e-61]} {RNA1509_1760} {RNA1310_2174.1} {RNA815_21304}

Mlig455_056239 {REF} {Length: 2397} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=98.9]} {Human: ENSG00000121741, ZMYM2, zinc finger MYM-type containing 2, [RH, Score=173, Expect=4e-45]; ENSG00000147130, ZMYM3, zinc finger MYM-type containing 3, [RH, Score=169, Expect=9e-44]} {Mouse: ENSMUSG00000021945, Zmym2, zinc finger, MYM-type 2, [RH, Score=174, Expect=2e-45]; ENSMUSG00000031310, Zmym3, zinc finger, MYM-type 3, [RH, Score=167, Expect=2e-43]} {Dmel: FBgn0010328, woc, without children, [RH, Score=194, Expect=1e-53]} {Smed: dd_Smed_v6_3776_0_1, dd_Smed_v6_3776_0_1, [RH, Score=212, Expect=5e-61]} {RNA1509_1760} {RNA1310_2174.1, RNA1509_1760} {RNA1509_1760, RNA815_21304}
5. MligTC455_47762 605 12.6 Mlig455_071139

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.173/0.00173

NT5C3A 1.789 - - - 0.965 - 0.824 Mlig455_071139 {REF} {Length: 2634} {TRANSSPLICED} {Pfam: Pyrimidine 5'-nucleotidase (UMPH-1) [PF05822.14, score=255.4]; haloacid dehalogenase-like hydrolase [PF12710.9, score=26.5]} {Human: ENSG00000122643, NT5C3A, 5'-nucleotidase, cytosolic IIIA, [RH, Score=234, Expect=5e-74]} {Mouse: ENSMUSG00000029780, Nt5c3, 5'-nucleotidase, cytosolic III, [RH, Score=232, Expect=7e-74]} {Dmel: FBgn0034988, cN-IIIB, cytosolic 5'-nucleotidase IIIB, [RH, Score=184, Expect=4e-55]} {Celegans: WBGene00017775, F25B5.3, Putative cytosolic 5'-nucleotidase 3, [RH, Score=176, Expect=2e-51]} {Smed: dd_Smed_v6_3196_0_2, dd_Smed_v6_3196_0_2, [RH, Score=230, Expect=1e-72]} {RNA1509_18774, RNA1509_39066, RNA1509_45580} {RNA1310_20363, RNA1509_18774, RNA1509_45580} {RNA1509_18774, RNA1509_45580, RNA815_5383}
6. MligTC455_52347 1355 28.23 Mlig455_049256

Neo: -

Age: -

1.717 - - - 0.950 - 0.767 Mlig455_049256 {REF} {Length: 3178} {RNA1509_7271} {RNA1310_3588.1, RNA1509_7271} {RNA1509_7271, RNA815_23572}
7. MligTC455_22531 642 13.38 Mlig455_003820, Mlig455_019969, Mlig455_033265, Mlig455_048427, Mlig455_048495, Mlig455_048570, Mlig455_049044

Neo: -

Age: -

RAD54L 1.698 - - - 0.964 - 0.734

Mlig455_003820 {REF} {Length: 560} {Pfam: DDE superfamily endonuclease [PF13358.8, score=40.0]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=79.7, Expect=7e-20]} {RNA1509_20978} {RNA1310_8640} {RNA815_3193.1}

Mlig455_019969 {REF} {Length: 1046} {Pfam: Homeodomain-like domain [PF13384.8, score=50.0]; DDE superfamily endonuclease [PF13358.8, score=39.2]; Helix-turn-helix domain [PF13518.8, score=38.4]; Winged helix-turn helix [PF13551.8, score=34.3]; Homeodomain-like domain [PF13565.8, score=30.0]; Transposase [PF01498.20, score=28.3]; Winged helix-turn-helix DNA-binding [PF13412.8, score=24.9]; Helix-turn-helix [PF01381.24, score=20.4]; Helix-turn-helix domain of resolvase [PF02796.17, score=20.0]; CENP-B N-terminal DNA-binding domain [PF04218.15, score=18.1]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=9e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}

Mlig455_033265 {REF} {Length: 560} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-21]} {RNA1509_20978} {RNA1310_8640} {RNA815_3193.1}

Mlig455_048427 {REF} {Length: 872} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.6]; Homeodomain-like domain [PF13384.8, score=21.9]; Transposase [PF01498.20, score=21.2]; Helix-turn-helix [PF01381.24, score=20.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}

Mlig455_048495 {REF} {Length: 3787} {Pfam: SNF2-related domain [PF00176.25, score=206.4]; Helicase conserved C-terminal domain [PF00271.33, score=52.6]; Homeodomain-like domain [PF13384.8, score=44.4]; Helix-turn-helix domain [PF13518.8, score=38.4]; DDE superfamily endonuclease [PF13358.8, score=36.4]; Winged helix-turn helix [PF13551.8, score=31.5]; Type III restriction enzyme, res subunit [PF04851.17, score=29.5]; Rad54 N terminal [PF08658.12, score=27.1]; Homeodomain-like domain [PF13565.8, score=25.8]; Helix-turn-helix [PF01381.24, score=23.9]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=22.0]; Transposase [PF01498.20, score=20.2]} {Human: ENSG00000085999, RAD54L, RAD54 like, [RH, Score=930, Expect=0.0]} {Mouse: ENSMUSG00000028702, Rad54l, RAD54 like (S. cerevisiae), [RH, Score=931, Expect=0.0]} {Dmel: FBgn0002989, okr, okra, [RH, Score=795, Expect=0.0]} {Celegans: WBGene00004298, rad-54, [RH, Score=804, Expect=0.0]} {Smed: dd_Smed_v6_15532_0_1, dd_Smed_v6_15532_0_1, [RH, Score=947, Expect=0.0]} {RNA1509_38919} {RNA1310_7218} {RNA815_1852.1}

Mlig455_048570 {REF} {Length: 872} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.6]; Homeodomain-like domain [PF13384.8, score=21.9]; Transposase [PF01498.20, score=21.2]; Helix-turn-helix [PF01381.24, score=20.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}

Mlig455_049044 {REF} {Length: 965} {Pfam: DDE superfamily endonuclease [PF13358.8, score=37.0]; Homeodomain-like domain [PF13384.8, score=21.1]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.8, Expect=6e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}
8. MligTC455_35521 1684 35.08 Mlig455_006137

Neo: -

Age: -

AP3D1 1.697 0.747 - - 0.950 - - Mlig455_006137 {REF} {Length: 5624} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=428.0]; AP-3 complex subunit delta-1 [PF06375.13, score=64.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=56.9]; HEAT repeats [PF13646.8, score=24.2]; HEAT repeat [PF02985.24, score=22.8]} {Human: ENSG00000065000, AP3D1, adaptor related protein complex 3 subunit delta 1, [RH, Score=951, Expect=0.0]} {Mouse: ENSMUSG00000020198, Ap3d1, adaptor-related protein complex 3, delta 1 subunit, [RH, Score=950, Expect=0.0]} {Dmel: FBgn0001087, g, garnet, [RH, Score=894, Expect=0.0]} {Celegans: WBGene00000162, apd-3, AP-3 complex subunit delta, [RH, Score=810, Expect=0.0]} {Smed: dd_Smed_v6_2534_0_1, dd_Smed_v6_2534_0_1, [RH, Score=892, Expect=0.0]} {RNA1509_20502, RNA1509_2967, RNA1509_31068, RNA1509_36255} {RNA1310_1080.1, RNA1509_20502, RNA1509_2967, RNA1509_31068, RNA1509_36255} {RNA1509_20502, RNA1509_2967, RNA1509_31068, RNA1509_36255, RNA815_531.1}
9. MligTC455_37655 1730 36.05 Mlig455_045811, Mlig455_063171

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 2.123/0.00010

POLD1 1.686 - - - 0.955 - 0.731

Mlig455_045811 {REF} {Length: 3941} {TRANSSPLICED} {Pfam: DNA polymerase family B [PF00136.23, score=502.9]; DNA polymerase family B, exonuclease domain [PF03104.21, score=277.1]; C4-type zinc-finger of DNA polymerase delta [PF14260.8, score=70.8]; DNA polymerase type B, organellar and viral [PF03175.15, score=23.3]} {Human: ENSG00000062822, POLD1, DNA polymerase delta 1, catalytic subunit, [RH, Score=1447, Expect=0.0]} {Mouse: ENSMUSG00000038644, Pold1, polymerase (DNA directed), delta 1, catalytic subunit, [RH, Score=1420, Expect=0.0]} {Dmel: FBgn0263600, DNApol-delta, DNA-polymerase-delta, [RH, Score=1394, Expect=0.0]} {Celegans: WBGene00008645, F10C2.4, DNA polymerase delta catalytic subunit, [RH, Score=1155, Expect=0.0]} {Smed: dd_Smed_v6_12966_0_1, dd_Smed_v6_12966_0_1, [RH, Score=1288, Expect=0.0]} {RNA1509_5077} {RNA1310_2678, RNA1509_5077} {RNA1509_5077, RNA815_953}

Mlig455_063171 {REF} {Length: 3939} {TRANSSPLICED} {Pfam: DNA polymerase family B [PF00136.23, score=502.9]; DNA polymerase family B, exonuclease domain [PF03104.21, score=277.1]; C4-type zinc-finger of DNA polymerase delta [PF14260.8, score=70.8]; DNA polymerase type B, organellar and viral [PF03175.15, score=23.3]} {Human: ENSG00000062822, POLD1, DNA polymerase delta 1, catalytic subunit, [RH, Score=1447, Expect=0.0]} {Mouse: ENSMUSG00000038644, Pold1, polymerase (DNA directed), delta 1, catalytic subunit, [RH, Score=1420, Expect=0.0]} {Dmel: FBgn0263600, DNApol-delta, DNA-polymerase-delta, [RH, Score=1394, Expect=0.0]} {Celegans: WBGene00008645, F10C2.4, DNA polymerase delta catalytic subunit, [RH, Score=1155, Expect=0.0]} {Smed: dd_Smed_v6_12966_0_1, dd_Smed_v6_12966_0_1, [RH, Score=1288, Expect=0.0]} {RNA1509_5077} {RNA1310_2678} {RNA815_953}
10. MligTC455_38045 6089 126.86 Mlig455_052780

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.292

1.654 - - - 0.952 - 0.702 Mlig455_052780 {REF} {Length: 3183} {TRANSSPLICED} {RNA1509_14953, RNA1509_804} {RNA1310_18248.1, RNA1509_14953, RNA1509_804} {RNA1509_14953, RNA1509_804, RNA815_8545}
11. MligTC455_47555 709 14.77 Mlig455_050057, Mlig455_054012

Neo: -

Age: -

0.976 - - - 0.976 - -

Mlig455_050057 {REF} {Length: 2361} {TRANSSPLICED} {RNA1509_10598, RNA1509_41028} {RNA1310_33942.1, RNA1509_10598} {RNA1509_10598, RNA815_15423}

Mlig455_054012 {REF} {Length: 1947} {TRANSSPLICED} {RNA1509_41028} {RNA1310_33942.1, RNA1509_41028} {RNA1509_41028, RNA815_15423}
12. MligTC455_47554 346 7.2 Mlig455_050102

Neo: -

Age: -

0.975 - - - 0.975 - - Mlig455_050102 {REF} {Length: 1552} {TRANSSPLICED} {RNA1509_41028} {RNA1310_33942.1} {RNA815_15423}
13. MligTC455_53163 1977 41.19 Mlig455_019251, Mlig455_035528

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.248

Region-enriched R5: 1.075/0.00039

SRSF12 0.971 - - - 0.971 - -

Mlig455_019251 {REF} {Length: 923} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=61.3]} {Human: ENSG00000154548, SRSF12, serine and arginine rich splicing factor 12, [RH, Score=91.3, Expect=4e-22]; ENSG00000188529, SRSF10, serine and arginine rich splicing factor 10, [RH, Score=90.5, Expect=8e-22]} {Mouse: ENSMUSG00000054679, Srsf12, serine/arginine-rich splicing factor 12, [RH, Score=91.3, Expect=3e-22]; ENSMUSG00000028676, Srsf10, serine/arginine-rich splicing factor 10, [RH, Score=90.5, Expect=5e-22]} {Dmel: FBgn0003742, tra2, transformer 2, [Score=58.2, Expect=1e-10]} {Celegans: WBGene00001368, exc-7, [Score=54.3, Expect=8e-09]} {Smed: dd_Smed_v6_661_0_6, dd_Smed_v6_661_0_6, [RH, Score=110, Expect=6e-32]} {RNA1509_11158, RNA1509_18186} {RNA1310_27314, RNA1509_18186} {RNA1509_18186, RNA815_2294.1}

Mlig455_035528 {REF} {Length: 1719} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.2]} {Smed: dd_Smed_v6_26560_0_2, dd_Smed_v6_26560_0_2, [Score=50.4, Expect=9e-07]} {RNA1509_11158} {RNA1310_14150.1} {RNA815_2294.1}
14. MligTC455_47104 1250 26.05 Mlig455_037914, Mlig455_038993

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.409/0.00127

0.969 - - - 0.969 - -

Mlig455_037914 {REF} {Length: 2292} {TRANSSPLICED} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=49.7]; Tudor domain [PF00567.26, score=23.5]} {RNA1509_12870} {RNA1310_8358} {RNA815_12194.1}

Mlig455_038993 {REF} {Length: 2294} {TRANSSPLICED} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=50.5]; Tudor domain [PF00567.26, score=21.9]} {RNA1509_12870} {RNA1310_8358, RNA1509_12870} {RNA1509_12870, RNA815_12194.1}
15. MligTC455_22382 3213 66.95 Mlig455_034348, Mlig455_034405, Mlig455_050078

Neo: -

Age: logFC(26M/2M)=0.169

Region-enriched R5: 1.022/0.00025

Regeneration-upregulated TP: 1.372

Regeneration-enriched TP: 1.372

PAPOLG 0.966 - - - 0.966 - -

Mlig455_034348 {REF} {Length: 3084} {TRANSSPLICED} {Pfam: Poly(A) polymerase central domain [PF04928.19, score=318.5]; Poly(A) polymerase predicted RNA binding domain [PF04926.17, score=67.1]; Nucleotidyltransferase domain [PF01909.25, score=35.6]} {Human: ENSG00000115421, PAPOLG, poly(A) polymerase gamma, [RH, Score=485, Expect=3e-163]; ENSG00000090060, PAPOLA, poly(A) polymerase alpha, [RH, Score=473, Expect=2e-158]; ENSG00000218823, PAPOLB, poly(A) polymerase beta, [RH, Score=461, Expect=2e-155]} {Mouse: ENSMUSG00000020273, Papolg, poly(A) polymerase gamma, [RH, Score=485, Expect=1e-163]; ENSMUSG00000021111, Papola, poly (A) polymerase alpha, [RH, Score=473, Expect=8e-159]} {Dmel: FBgn0015949, hrg, hiiragi, [RH, Score=467, Expect=2e-155]} {Celegans: WBGene00011791, T15H9.6, [RH, Score=389, Expect=1e-128]} {Smed: dd_Smed_v6_3033_0_1, dd_Smed_v6_3033_0_1, [RH, Score=371, Expect=2e-122]} {RNA1509_4033} {RNA1310_5207} {RNA815_1547.1}

Mlig455_034405 {REF} {Length: 3096} {TRANSSPLICED} {Pfam: Poly(A) polymerase central domain [PF04928.19, score=318.5]; Poly(A) polymerase predicted RNA binding domain [PF04926.17, score=67.1]; Nucleotidyltransferase domain [PF01909.25, score=35.6]} {Human: ENSG00000115421, PAPOLG, poly(A) polymerase gamma, [RH, Score=484, Expect=4e-163]; ENSG00000090060, PAPOLA, poly(A) polymerase alpha, [RH, Score=471, Expect=1e-157]; ENSG00000218823, PAPOLB, poly(A) polymerase beta, [RH, Score=462, Expect=7e-156]} {Mouse: ENSMUSG00000020273, Papolg, poly(A) polymerase gamma, [RH, Score=486, Expect=9e-164]; ENSMUSG00000021111, Papola, poly (A) polymerase alpha, [RH, Score=470, Expect=9e-158]} {Dmel: FBgn0015949, hrg, hiiragi, [RH, Score=467, Expect=2e-155]} {Celegans: WBGene00011791, T15H9.6, [RH, Score=389, Expect=1e-128]} {Smed: dd_Smed_v6_3033_0_1, dd_Smed_v6_3033_0_1, [RH, Score=372, Expect=2e-122]} {RNA1509_4033} {RNA1310_5207, RNA1509_4033} {RNA1509_4033, RNA815_1547.1}

Mlig455_050078 {REF} {Length: 3094} {TRANSSPLICED} {Pfam: Poly(A) polymerase central domain [PF04928.19, score=318.5]; Poly(A) polymerase predicted RNA binding domain [PF04926.17, score=67.1]; Nucleotidyltransferase domain [PF01909.25, score=35.6]} {Human: ENSG00000115421, PAPOLG, poly(A) polymerase gamma, [RH, Score=484, Expect=4e-163]; ENSG00000090060, PAPOLA, poly(A) polymerase alpha, [RH, Score=471, Expect=1e-157]; ENSG00000218823, PAPOLB, poly(A) polymerase beta, [RH, Score=462, Expect=7e-156]} {Mouse: ENSMUSG00000020273, Papolg, poly(A) polymerase gamma, [RH, Score=486, Expect=9e-164]; ENSMUSG00000021111, Papola, poly (A) polymerase alpha, [RH, Score=470, Expect=9e-158]} {Dmel: FBgn0015949, hrg, hiiragi, [RH, Score=467, Expect=2e-155]} {Celegans: WBGene00011791, T15H9.6, [RH, Score=389, Expect=1e-128]} {Smed: dd_Smed_v6_3033_0_1, dd_Smed_v6_3033_0_1, [RH, Score=372, Expect=2e-122]} {RNA1509_4033} {RNA1310_5207} {RNA815_1547.1}
16. MligTC455_49618 3111 64.81 Mlig455_023147, Mlig455_023235, Mlig455_023302

Neo: Irradiation

Age: -

Regeneration-upregulated R6: 1.248

Regeneration-enriched R6: 1.248

SMARCAD1 0.962 - - - 0.962 - -

Mlig455_023147 {REF} {Length: 5106} {Pfam: SNF2-related domain [PF00176.25, score=186.9]; Type III restriction enzyme, res subunit [PF04851.17, score=36.7]; CUE domain [PF02845.18, score=23.0]; Helix-hairpin-helix motif [PF12836.9, score=21.6]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=18.4]} {Human: ENSG00000163104, SMARCAD1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [Score=362, Expect=1e-108]} {Mouse: ENSMUSG00000029920, Smarcad1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [Score=360, Expect=2e-108]} {Dmel: FBgn0032157, Etl1, [Score=310, Expect=2e-91]} {Celegans: WBGene00010845, M03C11.8, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog, [Score=290, Expect=2e-83]} {Smed: dd_Smed_v6_9378_0_1, dd_Smed_v6_9378_0_1, [Score=381, Expect=4e-115]} {RNA1509_18362, RNA1509_4745} {RNA1310_533.1, RNA1509_18362, RNA1509_4745} {RNA1509_18362, RNA1509_4745, RNA815_3531}

Mlig455_023235 {REF} {Length: 4631} {Pfam: SNF2-related domain [PF00176.25, score=193.8]; Helicase conserved C-terminal domain [PF00271.33, score=68.5]; Type III restriction enzyme, res subunit [PF04851.17, score=35.9]; CUE domain [PF02845.18, score=23.0]; Helix-hairpin-helix motif [PF12836.9, score=21.1]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=17.9]} {Human: ENSG00000163104, SMARCAD1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [RH, Score=600, Expect=0.0]} {Mouse: ENSMUSG00000029920, Smarcad1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0032157, Etl1, [RH, Score=553, Expect=2e-179]} {Celegans: WBGene00010845, M03C11.8, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog, [RH, Score=507, Expect=2e-160]} {Smed: dd_Smed_v6_7560_0_1, dd_Smed_v6_7560_0_1, [RH, Score=595, Expect=0.0]} {RNA1509_18362} {RNA1310_533.1} {RNA815_3531}

Mlig455_023302 {REF} {Length: 5083} {Pfam: SNF2-related domain [PF00176.25, score=192.9]; Helicase conserved C-terminal domain [PF00271.33, score=65.7]; Type III restriction enzyme, res subunit [PF04851.17, score=35.7]; CUE domain [PF02845.18, score=22.9]; Helix-hairpin-helix motif [PF12836.9, score=21.0]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=17.8]} {Human: ENSG00000163104, SMARCAD1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [RH, Score=602, Expect=0.0]} {Mouse: ENSMUSG00000029920, Smarcad1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [RH, Score=605, Expect=0.0]} {Dmel: FBgn0032157, Etl1, [RH, Score=551, Expect=2e-178]} {Celegans: WBGene00010845, M03C11.8, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog, [RH, Score=504, Expect=5e-159]} {Smed: dd_Smed_v6_7560_0_1, dd_Smed_v6_7560_0_1, [RH, Score=592, Expect=0.0]} {RNA1509_4745} {RNA1310_533.1} {RNA815_3531}
17. MligTC455_28226 1247 25.97 Mlig455_023408

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.202/0.00950

CDC27 0.961 - - - 0.961 - - Mlig455_023408 {REF} {Length: 3413} {Pfam: Tetratricopeptide repeat [PF00515.30, score=99.9]; Tetratricopeptide repeat [PF07719.19, score=99.6]; Tetratricopeptide repeat [PF13181.8, score=85.2]; Tetratricopeptide repeat [PF13424.8, score=76.0]; Tetratricopeptide repeat [PF13428.8, score=75.6]; TPR repeat [PF13414.8, score=63.5]; Tetratricopeptide repeat [PF14559.8, score=61.9]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=49.4]; Tetratricopeptide repeat [PF13432.8, score=49.2]; Tetratricopeptide repeat [PF13371.8, score=38.3]; Tetratricopeptide repeat [PF13174.8, score=37.0]; Tetratricopeptide repeat [PF13431.8, score=32.9]; Tetratricopeptide repeat [PF13429.8, score=28.3]; Tetratricopeptide repeat [PF13176.8, score=26.0]} {Human: ENSG00000004897, CDC27, cell division cycle 27, [RH, Score=405, Expect=5e-129]} {Mouse: ENSMUSG00000020687, Cdc27, cell division cycle 27, [RH, Score=401, Expect=1e-127]} {Dmel: FBgn0012058, Cdc27, Cell division cycle 27, [RH, Score=312, Expect=1e-93]} {Celegans: WBGene00003132, mat-1, Cell division cycle protein 27 homolog, [RH, Score=200, Expect=4e-54]} {Smed: dd_Smed_v6_7556_0_1, dd_Smed_v6_7556_0_1, [RH, Score=210, Expect=2e-57]} {RNA1509_6440} {RNA1310_2229} {RNA815_864}
18. MligTC455_23455 258 5.38 Mlig455_070572

Neo: Int S/G2/M

Age: -

LRR1 0.959 - - - 0.959 - - Mlig455_070572 {REF} {Length: 2069} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=40.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=29.1]} {Human: ENSG00000165501, LRR1, leucine rich repeat protein 1, [RH, Score=86.3, Expect=9e-18]} {Mouse: ENSMUSG00000029028, Lrrc47, leucine rich repeat containing 47, [Score=67.4, Expect=1e-11]} {Dmel: FBgn0010398, Lrr47, Leucine-rich repeat 47, [RH, Score=80.1, Expect=6e-16]} {Celegans: WBGene00015779, lrch-1, Leucine-rich Repeats (LRR) and Calponin Homology (CH) domain homolog, [Score=59.3, Expect=2e-09]} {Smed: dd_Smed_v6_29200_0_2, dd_Smed_v6_29200_0_2, [RH, Score=102, Expect=9e-25]} {RNA1509_56534} {RNA1310_17237.1, RNA1509_56534} {RNA1509_56534, RNA815_44907}
19. MligTC455_22790 8950 186.46 Mlig455_009210

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.204

HNRNPK 0.958 - - - 0.958 - - Mlig455_009210 {REF} {Length: 1967} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=98.4]; KH domain [PF07650.19, score=46.7]; KH domain [PF13083.8, score=20.8]} {Human: ENSG00000165119, HNRNPK, heterogeneous nuclear ribonucleoprotein K, [RH, Score=161, Expect=6e-46]} {Mouse: ENSMUSG00000021546, Hnrnpk, heterogeneous nuclear ribonucleoprotein K, [RH, Score=161, Expect=5e-47]} {Dmel: FBgn0267791, HnRNP-K, Heterogeneous nuclear ribonucleoprotein K, [RH, Score=153, Expect=2e-42]} {Celegans: WBGene00017816, hrpk-1, Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog, [Score=154, Expect=8e-44]} {Smed: dd_Smed_v6_1998_0_1, dd_Smed_v6_1998_0_1, [RH, Score=163, Expect=3e-46]} {RNA1509_10759, RNA1509_1170} {RNA1310_6557.1, RNA1509_10759, RNA1509_1170} {RNA1509_10759, RNA1509_1170, RNA815_5052.1}
20. MligTC455_45539 1856 38.66 Mlig455_039704, Mlig455_039760

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.917/0.00000

CCNB1 0.957 - - - 0.957 - -

Mlig455_039704 {REF} {Length: 2262} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=119.1]; Cyclin, C-terminal domain [PF02984.21, score=90.6]} {Human: ENSG00000134057, CCNB1, cyclin B1, [RH, Score=245, Expect=1e-76]; ENSG00000157456, CCNB2, cyclin B2, [RH, Score=234, Expect=9e-73]} {Mouse: ENSMUSG00000041431, Ccnb1, cyclin B1, [RH, Score=238, Expect=5e-74]; ENSMUSG00000032218, Ccnb2, cyclin B2, [RH, Score=234, Expect=4e-73]} {Dmel: FBgn0000405, CycB, Cyclin B, [RH, Score=202, Expect=8e-60]} {Celegans: WBGene00000865, cyb-1, G2/mitotic-specific cyclin-B1, [RH, Score=143, Expect=6e-39]} {Smed: dd_Smed_v6_7837_0_1, dd_Smed_v6_7837_0_1, [RH, Score=125, Expect=4e-32]} {RNA1509_33056} {RNA1310_11479, RNA1509_33056} {RNA1509_33056, RNA815_4610}

Mlig455_039760 {REF} {Length: 3363} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=119.1]; Cyclin, C-terminal domain [PF02984.21, score=90.5]} {Human: ENSG00000134057, CCNB1, cyclin B1, [RH, Score=244, Expect=1e-76]} {Mouse: ENSMUSG00000041431, Ccnb1, cyclin B1, [RH, Score=238, Expect=4e-74]; ENSMUSG00000032218, Ccnb2, cyclin B2, [RH, Score=235, Expect=2e-73]} {Dmel: FBgn0000405, CycB, Cyclin B, [RH, Score=201, Expect=4e-59]} {Celegans: WBGene00000865, cyb-1, G2/mitotic-specific cyclin-B1, [RH, Score=143, Expect=6e-39]} {Smed: dd_Smed_v6_7837_0_1, dd_Smed_v6_7837_0_1, [RH, Score=124, Expect=1e-31]} {RNA1509_43924, RNA1509_7203} {RNA1310_11479, RNA1509_43924, RNA1509_7203} {RNA1509_43924, RNA1509_7203, RNA815_4610}
21. MligTC455_49128 1037 21.6 Mlig455_048793

Neo: -

Age: -

Region-enriched R5: 2.167/0.01924

0.955 - - - 0.955 - - Mlig455_048793 {REF} {Length: 901} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=23.5]} {Dmel: FBgn0035469, CG14977, [RH, Score=48.9, Expect=1e-08]} {RNA1509_30812, RNA1509_40607} {RNA1310_29229, RNA1509_30812, RNA1509_40607} {RNA1509_30812, RNA1509_40607, RNA815_11630.2}
22. MligTC455_53140 1945 40.52 Mlig455_057331

Neo: Neoblast, stringent

Age: -

Regeneration-upregulated BL: 1.166

Regeneration-enriched BL: 1.166

0.955 - - - 0.955 - - Mlig455_057331 {REF} {Length: 1071} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_17961} {RNA1310_1873.1} {RNA815_8940}
23. MligTC455_12243 3065 63.86 Mlig455_064957

Neo: Neoblast

Age: logFC(26M/2M)=-0.277

Region-enriched R5: 2.008/0.00000
Region-enriched R4: 1.623/0.00002

SKP1 0.952 - - - 0.952 - - Mlig455_064957 {REF} {Length: 769} {TRANSSPLICED} {Pfam: Skp1 family, dimerisation domain [PF01466.21, score=94.6]; Skp1 family, tetramerisation domain [PF03931.17, score=93.5]} {Human: ENSG00000113558, SKP1, S-phase kinase associated protein 1, [Score=254, Expect=2e-87]} {Mouse: ENSMUSG00000036309, Skp1a, S-phase kinase-associated protein 1A, [Score=254, Expect=1e-87]} {Dmel: FBgn0025637, SkpA, SKP1-related A, [Score=242, Expect=4e-83]} {Celegans: WBGene00004807, skr-1, Skp1-related protein, [RH, Score=222, Expect=6e-75]} {Smed: dd_Smed_v6_1337_0_1, dd_Smed_v6_1337_0_1, [Score=253, Expect=1e-87]} {RNA1509_2031} {RNA1310_18757.1} {RNA815_5768.1}
24. MligTC455_49239 254 5.29 Mlig455_002495

Neo: -

Age: -

0.95 - - - 0.950 - - Mlig455_002495 {REF} {Length: 1078} {NoTransDecoderORF} {RNA1509_1763} {RNA1310_14034.1} {RNA815_4894}
25. MligTC455_53226 1482 30.87 Mlig455_011200

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.619

Region-enriched R5: 1.629/0.00001
Region-enriched R4: 1.222/0.01646

PIN1 0.95 - - - 0.950 - - Mlig455_011200 {REF} {Length: 729} {TRANSSPLICED} {Pfam: PPIC-type PPIASE domain [PF00639.23, score=87.0]; PPIC-type PPIASE domain [PF13616.8, score=68.4]; WW domain [PF00397.28, score=46.5]; PPIC-type PPIASE domain [PF13145.8, score=27.3]} {Human: ENSG00000127445, PIN1, peptidylprolyl cis/trans isomerase, NIMA-interacting 1, [RH, Score=171, Expect=5e-55]} {Mouse: ENSMUSG00000074997, Pin1rt1, protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1, retrogene 1, [RH, Score=168, Expect=6e-54]; ENSMUSG00000032171, Pin1, protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1, [RH, Score=166, Expect=5e-53]} {Dmel: FBgn0015379, dod, dodo, [RH, Score=176, Expect=4e-57]} {Celegans: WBGene00022448, pinn-1, Peptidyl-prolyl cis-trans isomerase, [RH, Score=159, Expect=1e-50]} {Smed: dd_Smed_v6_4606_0_1, dd_Smed_v6_4606_0_1, [RH, Score=169, Expect=1e-54]} {RNA1509_54321} {RNA1310_48600} {RNA815_25171}
26. MligTC455_53227 1520 31.66 Mlig455_011229

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.612/0.00003
Region-enriched R4: 1.099/0.04391

PIN1 0.95 - - - 0.950 - - Mlig455_011229 {REF} {Length: 727} {TRANSSPLICED} {Pfam: PPIC-type PPIASE domain [PF00639.23, score=87.0]; PPIC-type PPIASE domain [PF13616.8, score=68.4]; WW domain [PF00397.28, score=46.5]; PPIC-type PPIASE domain [PF13145.8, score=27.3]} {Human: ENSG00000127445, PIN1, peptidylprolyl cis/trans isomerase, NIMA-interacting 1, [RH, Score=171, Expect=5e-55]} {Mouse: ENSMUSG00000074997, Pin1rt1, protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1, retrogene 1, [RH, Score=168, Expect=6e-54]; ENSMUSG00000032171, Pin1, protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1, [RH, Score=166, Expect=5e-53]} {Dmel: FBgn0015379, dod, dodo, [RH, Score=176, Expect=4e-57]} {Celegans: WBGene00022448, pinn-1, Peptidyl-prolyl cis-trans isomerase, [RH, Score=159, Expect=1e-50]} {Smed: dd_Smed_v6_4606_0_1, dd_Smed_v6_4606_0_1, [RH, Score=169, Expect=1e-54]} {RNA1509_47886, RNA1509_49837, RNA1509_53173} {RNA1310_48600, RNA1509_47886, RNA1509_49837, RNA1509_53173} {RNA1509_47886, RNA1509_49837, RNA1509_53173, RNA815_25171}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA