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Results for MligTC455_36689

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36689 269 5.60 Mlig455_062021

Neo: -

Age: -

 Mlig455_062021 {REF} {Length: 1355} {RNA1509_12566} {RNA1310_19015} {RNA815_24761}

Cumulative graph for MligTC455_36689

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.564 2.907 0.77621 1.00000
RegionR2 0.514 2.907 0.42426 0.81483
RegionR3 0.373 2.907 0.46240 0.97173
RegionR4 0.671 2.907 0.37897 0.70307
RegionR5 -1.251 2.907 0.04772 0.18139
RegionR6 0.331 2.907 0.53961 1.00000
RegionR7 -1.65 2.907 0.08906 0.57192
RegionR8 0.448 2.907 0.59255 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.282 2.907 0.35579 1.00000
RegenerationR2 -0.473 2.907 0.29711 0.73940
RegenerationR3 0.179 2.907 0.75598 0.96644
RegenerationR4 -0.266 2.907 0.69953 0.95346
RegenerationR5 1.086 2.907 0.08108 0.44265
RegenerationR6 0.204 2.907 0.73193 0.94198
RegenerationBL 0.163 2.907 0.84224 1.00000
RegenerationTP 1.185 2.907 0.13788 0.55592


Genes with expression patterns similar to MligTC455_36689

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36689 269 5.6 Mlig455_062021

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_062021 {REF} {Length: 1355} {RNA1509_12566} {RNA1310_19015} {RNA815_24761}
2. MligTC455_36690 564 11.75 Mlig455_063224, Mlig455_067365

Neo: -

Age: logFC(26M/2M)=0.298

 RGS3 5.725 0.995 0.937 0.979 0.931 0.937 0.946

Mlig455_063224 {REF} {Length: 4974} {Pfam: PDZ domain [PF00595.26, score=32.7]; PDZ domain [PF17820.3, score=28.9]} {Human: ENSG00000138835, RGS3, regulator of G protein signaling 3, [Score=52.4, Expect=4e-06]} {Mouse: ENSMUSG00000059810, Rgs3, regulator of G-protein signaling 3, [Score=52.0, Expect=4e-06]} {Dmel: FBgn0020278, loco, locomotion defects, [Score=53.1, Expect=1e-06]} {Smed: dd_Smed_v6_17732_0_1, dd_Smed_v6_17732_0_1, [Score=53.9, Expect=4e-07]} {RNA1509_12566} {RNA1310_5288.1} {RNA815_25046}

Mlig455_067365 {REF} {Length: 5392} {Pfam: PDZ domain [PF00595.26, score=32.8]; PDZ domain [PF17820.3, score=29.4]} {Human: ENSG00000138835, RGS3, regulator of G protein signaling 3, [Score=59.3, Expect=3e-08]} {Mouse: ENSMUSG00000059810, Rgs3, regulator of G-protein signaling 3, [RH, Score=57.0, Expect=6e-08]} {Dmel: FBgn0020278, loco, locomotion defects, [Score=52.8, Expect=2e-06]} {Smed: dd_Smed_v6_17732_0_1, dd_Smed_v6_17732_0_1, [Score=61.2, Expect=2e-09]} {RNA1509_12566} {RNA1310_5288.1, RNA1509_12566} {RNA1509_12566, RNA815_25046}
3. MligTC455_18787 963 20.06 Mlig455_014022

Neo: -

Age: -

Region-enriched R2: 1.334/0.03482

 STRC 0.97 - - 0.970 - - - Mlig455_014022 {REF} {Length: 5754} {Human: ENSG00000242866, STRC, stereocilin, [RH, Score=76.3, Expect=4e-13]} {Mouse: ENSMUSG00000033498, Strc, stereocilin, [RH, Score=80.9, Expect=1e-14]} {RNA1509_4378} {RNA1310_1493.1, RNA1509_4378} {RNA1509_4378, RNA815_804}
4. MligTC455_35294 1547 32.23 Mlig455_001167, Mlig455_001326, Mlig455_070580

Neo: -

Age: Down-Up-Up

Region-enriched R8: 1.741/0.00233
Region-enriched R2: 1.304/0.02383

 GRIA2, GRID1 0.953 - - 0.953 - - -

Mlig455_001167 {REF} {Length: 3625} {Pfam: Ligand-gated ion channel [PF00060.28, score=89.8]; Universal stress protein family [PF00582.28, score=80.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=33.4]; Receptor family ligand binding region [PF01094.30, score=23.9]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=19.3]} {Human: ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=123, Expect=6e-28]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=120, Expect=3e-27]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=117, Expect=5e-26]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=123, Expect=3e-28]; ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=117, Expect=4e-26]} {Dmel: FBgn0038837, CG3822, [Score=124, Expect=9e-29]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=113, Expect=2e-25]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=220, Expect=2e-63]} {RNA1509_17988} {RNA1310_23557} {RNA815_11623.1}

Mlig455_001326 {REF} {Length: 3494} {Pfam: Ligand-gated ion channel [PF00060.28, score=92.1]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=33.4]; Receptor family ligand binding region [PF01094.30, score=23.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=19.8]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=121, Expect=2e-27]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=118, Expect=2e-26]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=124, Expect=2e-28]} {Dmel: FBgn0038840, Grik, [Score=125, Expect=7e-29]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=114, Expect=1e-25]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=220, Expect=9e-64]} {RNA1509_17988} {RNA1310_23557} {RNA815_11623.1}

Mlig455_070580 {REF} {Length: 3686} {Pfam: Ligand-gated ion channel [PF00060.28, score=92.1]; Universal stress protein family [PF00582.28, score=80.3]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=33.4]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=33.2]; Receptor family ligand binding region [PF01094.30, score=22.8]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=125, Expect=1e-28]; ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=128, Expect=1e-29]} {Dmel: FBgn0038837, CG3822, [Score=135, Expect=4e-32]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=119, Expect=4e-27]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=237, Expect=2e-69]} {RNA1509_17988} {RNA1310_23557} {RNA815_11623.1}

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