Data search
Results for MligTC455_36716
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36716 | 64 | 1.33 | Mlig455_017472 | Neo: - Age: - |
Mlig455_017472 {REF} {Length: 2617} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=56.6]; MFS/sugar transport protein [PF13347.8, score=28.7]} {RNA1509_52459} {RNA1310_18194} {RNA815_17573} |
Cumulative graph for MligTC455_36716
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.229 | 1.585 | 0.57613 | 1.00000 | |
| RegionR2 | 0.276 | 1.585 | 0.77778 | 1.00000 | |
| RegionR3 | -0.082 | 1.585 | 0.88731 | 1.00000 | |
| RegionR4 | 0.318 | 1.585 | 0.74886 | 1.00000 | |
| RegionR5 | 0.499 | 1.585 | 0.60492 | 0.96230 | |
| RegionR6 | -0.209 | 1.585 | 0.91863 | 1.00000 | |
| RegionR7 | 0.95 | 1.585 | 0.47673 | 1.00000 | |
| RegionR8 | 1.477 | 1.585 | 0.30809 | 0.94027 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.099 | 1.585 | 0.99997 | 1.00000 | |
| RegenerationR2 | -0.428 | 1.585 | 0.58128 | 0.90781 | |
| RegenerationR3 | 0.431 | 1.585 | 0.63412 | 0.92215 | |
| RegenerationR4 | -0.038 | 1.585 | 0.95855 | 1.00000 | |
| RegenerationR5 | 1.066 | 1.585 | 0.11193 | 0.50484 | |
| RegenerationR6 | -0.148 | 1.585 | 0.88371 | 1.00000 | |
| RegenerationBL | -0.228 | 1.585 | 0.87122 | 1.00000 | |
| RegenerationTP | -5.286 | 1.585 | 0.01682 | 0.22260 |
Genes with expression patterns similar to MligTC455_36716
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36716 | 64 | 1.33 | Mlig455_017472 | Neo: - Age: - |
4 | 1.000 | - | - | 1.000 | 1.000 | 1.000 | Mlig455_017472 {REF} {Length: 2617} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=56.6]; MFS/sugar transport protein [PF13347.8, score=28.7]} {RNA1509_52459} {RNA1310_18194} {RNA815_17573} | |
| 2. | MligTC455_06000 | 28 | 0.59 | Mlig455_012051 | Neo: - Age: - |
0.989 | - | - | - | - | 0.989 | - | Mlig455_012051 {REF} {Length: 493} {RNA1509_22369} {RNA1310_28603.1} {RNA815_22101.2} | |
| 3. | MligTC455_18060 | 927 | 19.32 | Mlig455_011531, Mlig455_011606, Mlig455_050010 | Neo: - Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_011531 {REF} {Length: 3163} {TRANSSPLICED} {RNA1509_20141, RNA1509_23130} {RNA1310_21196, RNA1509_23130} {RNA1509_23130, RNA815_14361} Mlig455_011606 {REF} {Length: 2521} {TRANSSPLICED} {RNA1509_20141} {RNA1310_21196, RNA1509_20141} {RNA1509_20141, RNA815_14361} Mlig455_050010 {REF} {Length: 1531} {TRANSSPLICED} {RNA1509_54723} {RNA1310_21196, RNA1509_54723} {RNA1509_54723, RNA815_14361} |
|
| 4. | MligTC455_19432 | 561 | 11.69 | Mlig455_070146 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.354 Region-enriched R5: 4.414/0.00000 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_070146 {REF} {Length: 1706} {Pfam: Transmembrane protein family 72 [PF16054.7, score=50.2]} {Mouse: ENSMUSG00000048108, Tmem72, transmembrane protein 72, [RH, Score=48.5, Expect=3e-06]} {RNA1509_20347, RNA1509_34957, RNA1509_57156} {RNA1310_23526, RNA1509_20347, RNA1509_34957, RNA1509_57156} {RNA1509_20347, RNA1509_34957, RNA1509_57156, RNA815_9198} | |
| 5. | MligTC455_47719 | 292 | 6.08 | Mlig455_017393 | Neo: - Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_017393 {REF} {Length: 1081} {NoTransDecoderORF} {RNA1509_14952} {RNA1310_8790} {RNA815_3189} | |
| 6. | MligTC455_37174 | 11716 | 244.09 | Mlig455_038112 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 3.206/0.00001 Regeneration-downregulated R6: -4.409 Regeneration-depleted R6: -4.409 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_038112 {REF} {Length: 1549} {RNA1509_25356} {RNA1310_8331} {RNA815_3206.1} | |
| 7. | MligTC455_43546 | 425 | 8.86 | Mlig455_047577, Mlig455_069697 | Neo: - |
MRM2 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_047577 {REF} {Length: 2267} {TRANSSPLICED} {Pfam: FtsJ-like methyltransferase [PF01728.21, score=168.4]} {Human: ENSG00000122687, MRM2, mitochondrial rRNA methyltransferase 2, [RH, Score=157, Expect=3e-47]} {Mouse: ENSMUSG00000029557, Mrm2, mitochondrial rRNA methyltransferase 2, [RH, Score=151, Expect=3e-45]} {Dmel: FBgn0038737, CG11447, [RH, Score=181, Expect=6e-57]} {Celegans: WBGene00009735, F45G2.9, rRNA methyltransferase 2, mitochondrial, [RH, Score=127, Expect=3e-36]} {Smed: dd_Smed_v6_12446_0_1, dd_Smed_v6_12446_0_1, [RH, Score=166, Expect=1e-51]} {RNA1509_23424} {RNA1310_42006} {RNA815_23276} Mlig455_069697 {REF} {Length: 1974} {TRANSSPLICED} {Pfam: FtsJ-like methyltransferase [PF01728.21, score=168.4]} {Human: ENSG00000122687, MRM2, mitochondrial rRNA methyltransferase 2, [RH, Score=157, Expect=3e-47]} {Mouse: ENSMUSG00000029557, Mrm2, mitochondrial rRNA methyltransferase 2, [RH, Score=151, Expect=3e-45]} {Dmel: FBgn0038737, CG11447, [RH, Score=181, Expect=6e-57]} {Celegans: WBGene00009735, F45G2.9, rRNA methyltransferase 2, mitochondrial, [RH, Score=127, Expect=3e-36]} {Smed: dd_Smed_v6_12446_0_1, dd_Smed_v6_12446_0_1, [RH, Score=166, Expect=1e-51]} {RNA1509_23424} {RNA1310_42006, RNA1509_23424} {RNA1509_23424, RNA815_23276} |
| 8. | MligTC455_27742 | 216 | 4.49 | Mlig455_020706 | Neo: Irradiation Age: - Region-enriched R2: 4.070/0.03422 |
TMED3 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_020706 {REF} {Length: 1854} {TRANSSPLICED} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=82.1]} {Human: ENSG00000166557, TMED3, transmembrane p24 trafficking protein 3, [Score=75.9, Expect=4e-15]; ENSG00000117500, TMED5, transmembrane p24 trafficking protein 5, [Score=73.9, Expect=2e-14]} {Mouse: ENSMUSG00000063406, Tmed5, transmembrane p24 trafficking protein 5, [Score=74.7, Expect=7e-15]; ENSMUSG00000032353, Tmed3, transmembrane p24 trafficking protein 3, [Score=73.9, Expect=1e-14]} {Dmel: FBgn0051787, CG31787, [Score=73.9, Expect=9e-15]} {Celegans: WBGene00010670, K08E4.6, [Score=79.0, Expect=2e-16]} {Smed: dd_Smed_v6_3127_0_1, dd_Smed_v6_3127_0_1, [Score=84.7, Expect=4e-18]} {RNA1509_20798} {RNA1310_17461} {RNA815_5363} |
| 9. | MligTC455_46362 | 447 | 9.31 | Mlig455_020205 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_020205 {REF} {Length: 2225} {Pfam: Universal stress protein family [PF00582.28, score=77.6]} {Smed: dd_Smed_v6_3502_0_1, dd_Smed_v6_3502_0_1, [Score=93.2, Expect=1e-22]} {RNA1509_57267} {RNA1310_30614.1} {RNA815_47657} | |
| 10. | MligTC455_39408 | 21 | 0.43 | Mlig455_026168 | Neo: - Age: - |
RBMS1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_026168 {REF} {Length: 2919} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.6]} {Human: ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=103, Expect=1e-23]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=99.4, Expect=4e-22]; ENSG00000076067, RBMS2, RNA binding motif single stranded interacting protein 2, [Score=99.4, Expect=4e-22]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [Score=107, Expect=4e-25]} {Dmel: FBgn0052423, shep, alan shepard, [Score=81.6, Expect=3e-16]} {Celegans: WBGene00006331, sup-26, SUPpressor, [Score=93.2, Expect=2e-20]} {Smed: dd_Smed_v6_3832_0_1, dd_Smed_v6_3832_0_1, [RH, Score=105, Expect=5e-25]} {RNA1509_50956} {RNA1310_39053} {RNA815_20087} |
| 11. | MligTC455_00951 | 7 | 0.14 | Mlig455_056433 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_056433 {REF} {Length: 432} {NoTransDecoderORF} {RNA1509_24791} {RNA1310_51796} |
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