Data search


search
Exact
Search

Results for MligTC455_36794

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36794 299 6.23 Mlig455_032058

Neo: -

Age: -

Mlig455_032058 {REF} {Length: 1120} {TRANSSPLICED} {RNA1509_53862, RNA1509_58738} {RNA1310_30758, RNA1509_53862, RNA1509_58738} {RNA1509_53862, RNA1509_58738, RNA815_30191.1}

Cumulative graph for MligTC455_36794

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.336 3.297 0.10573 0.68176
RegionR2 0.414 3.297 0.66145 0.99316
RegionR3 0.469 3.297 0.60183 1.00000
RegionR4 1.813 3.297 0.01876 0.09741
RegionR5 1.435 3.297 0.03212 0.13633
RegionR6 1.523 3.297 0.03288 0.33754
RegionR7 1.092 3.297 0.25321 0.87963
RegionR8 -0.41 3.297 0.94507 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.415 3.297 0.99991 1.00000
RegenerationR2 0.457 3.297 0.37226 0.79739
RegenerationR3 0.222 3.297 0.69865 0.94707
RegenerationR4 -0.876 3.297 0.11858 0.52416
RegenerationR5 -0.269 3.297 0.57245 0.89690
RegenerationR6 -0.406 3.297 0.44889 0.76963
RegenerationBL -0.424 3.297 0.60513 0.95167
RegenerationTP 0.421 3.297 0.61490 0.96951


Genes with expression patterns similar to MligTC455_36794

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36794 299 6.23 Mlig455_032058

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_032058 {REF} {Length: 1120} {TRANSSPLICED} {RNA1509_53862, RNA1509_58738} {RNA1310_30758, RNA1509_53862, RNA1509_58738} {RNA1509_53862, RNA1509_58738, RNA815_30191.1}
2. MligTC455_13491 206 4.29 Mlig455_004127, Mlig455_060495

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=3.653

Region-enriched R5: 3.627/0.00015
Region-enriched R4: 3.250/0.01802

1.722 - - - 0.768 - 0.954

Mlig455_004127 {REF} {Length: 1285} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=31.1]} {RNA1509_40924} {RNA1310_26717} {RNA815_11954.1}

Mlig455_060495 {REF} {Length: 1274} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=30.4]} {RNA1509_40924} {RNA1310_26717} {RNA815_11954.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA