Data search


search
Exact
Search

Results for MligTC455_36807

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36807 716 14.92 Mlig455_056557

Neo: -

Age: -

FLII Mlig455_056557 {REF} {Length: 3556} {Pfam: Gelsolin repeat [PF00626.24, score=157.5]} {Human: ENSG00000284571, FLII, FLII, actin remodeling protein, [Score=548, Expect=3e-179]; ENSG00000177731, FLII, FLII, actin remodeling protein, [Score=548, Expect=3e-179]} {Mouse: ENSMUSG00000002812, Flii, flightless I actin binding protein, [Score=541, Expect=7e-176]} {Dmel: FBgn0000709, fliI, flightless I, [Score=520, Expect=5e-168]} {Celegans: WBGene00001443, fli-1, Protein flightless-1 homolog, [Score=472, Expect=4e-150]} {Smed: dd_Smed_v6_1781_0_1, dd_Smed_v6_1781_0_1, [Score=541, Expect=4e-176]} {RNA1509_3534} {RNA1310_2222.2} {RNA815_3661}

Cumulative graph for MligTC455_36807

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.26 4.241 0.79181 1.00000
RegionR2 -0.193 4.241 0.66898 0.99745
RegionR3 -0.333 4.241 0.37466 0.90844
RegionR4 1.037 4.241 0.01388 0.07795
RegionR5 0.598 4.241 0.06474 0.22529
RegionR6 0.389 4.241 0.27685 0.86727
RegionR7 -1.077 4.241 0.05112 0.43483
RegionR8 -0.68 4.241 0.28702 0.91468

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.091 4.241 0.94208 1.00000
RegenerationR2 -0.208 4.241 0.58664 0.90924
RegenerationR3 -0.085 4.241 0.84265 0.99539
RegenerationR4 -0.493 4.241 0.24359 0.69167
RegenerationR5 -0.34 4.241 0.37769 0.78552
RegenerationR6 -0.205 4.241 0.62235 0.88209
RegenerationBL 0.403 4.241 0.43768 0.80529
RegenerationTP -0.057 4.241 0.92784 1.00000


Genes with expression patterns similar to MligTC455_36807

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36807 716 14.92 Mlig455_056557

Neo: -

Age: -

FLII 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_056557 {REF} {Length: 3556} {Pfam: Gelsolin repeat [PF00626.24, score=157.5]} {Human: ENSG00000284571, FLII, FLII, actin remodeling protein, [Score=548, Expect=3e-179]; ENSG00000177731, FLII, FLII, actin remodeling protein, [Score=548, Expect=3e-179]} {Mouse: ENSMUSG00000002812, Flii, flightless I actin binding protein, [Score=541, Expect=7e-176]} {Dmel: FBgn0000709, fliI, flightless I, [Score=520, Expect=5e-168]} {Celegans: WBGene00001443, fli-1, Protein flightless-1 homolog, [Score=472, Expect=4e-150]} {Smed: dd_Smed_v6_1781_0_1, dd_Smed_v6_1781_0_1, [Score=541, Expect=4e-176]} {RNA1509_3534} {RNA1310_2222.2} {RNA815_3661}
2. MligTC455_36508 1762 36.71 Mlig455_015760

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R4: 1.370/0.01048

SNRPC 1.745 - - - 0.783 0.962 - Mlig455_015760 {REF} {Length: 849} {TRANSSPLICED} {Pfam: U1 zinc finger [PF06220.14, score=67.7]} {Human: ENSG00000124562, SNRPC, small nuclear ribonucleoprotein polypeptide C, [RH, Score=109, Expect=5e-30]} {Mouse: ENSMUSG00000024217, Snrpc, U1 small nuclear ribonucleoprotein C, [RH, Score=108, Expect=4e-30]} {Dmel: FBgn0261792, snRNP-U1-C, small ribonucleoprotein particle U1 subunit C, [RH, Score=112, Expect=9e-32]} {Celegans: WBGene00017238, F08B4.7, U1 small nuclear ribonucleoprotein C, [RH, Score=102, Expect=4e-28]} {Smed: dd_Smed_v6_3772_0_2, dd_Smed_v6_3772_0_2, [RH, Score=113, Expect=2e-32]} {RNA1509_16660, RNA1509_35390} {RNA1310_43118, RNA1509_16660, RNA1509_35390} {RNA1509_16660, RNA1509_35390, RNA815_57390.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA