M. lignano Tomo-Seq
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Results for MligTC455_36875

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36875 715 14.90 Mlig455_040377

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.840

 Mlig455_040377 {REF} {Length: 952} {TRANSSPLICED} {Pfam: Dienelactone hydrolase family [PF01738.20, score=57.0]} {Smed: dd_Smed_v6_2062_0_1, dd_Smed_v6_2062_0_1, [RH, Score=169, Expect=2e-51]} {RNA1509_47952} {RNA1310_33560, RNA1509_47952} {RNA1509_47952, RNA815_22422}

Cumulative graph for MligTC455_36875

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.443 4.234 0.67771 1.00000
RegionR2 -0.098 4.234 0.84556 1.00000
RegionR3 0.254 4.234 0.51948 1.00000
RegionR4 0.405 4.234 0.37889 0.70306
RegionR5 0.732 4.234 0.04065 0.16137
RegionR6 0.017 4.234 0.96771 1.00000
RegionR7 -0.248 4.234 0.62182 1.00000
RegionR8 -0.618 4.234 0.32291 0.95642

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.807 4.234 0.63586 1.00000
RegenerationR2 -0.58 4.234 0.19460 0.63929
RegenerationR3 -0.163 4.234 0.72711 0.95677
RegenerationR4 -0.196 4.234 0.67430 0.94395
RegenerationR5 -0.5 4.234 0.24680 0.68011
RegenerationR6 -0.151 4.234 0.75723 0.95588
RegenerationBL -0.997 4.234 0.12864 0.42681
RegenerationTP 0.028 4.234 0.96461 1.00000


Genes with expression patterns similar to MligTC455_36875

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36875 715 14.9 Mlig455_040377

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.840

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_040377 {REF} {Length: 952} {TRANSSPLICED} {Pfam: Dienelactone hydrolase family [PF01738.20, score=57.0]} {Smed: dd_Smed_v6_2062_0_1, dd_Smed_v6_2062_0_1, [RH, Score=169, Expect=2e-51]} {RNA1509_47952} {RNA1310_33560, RNA1509_47952} {RNA1509_47952, RNA815_22422}
2. MligTC455_36874 770 16.04 Mlig455_034172

Neo: -

Age: logFC(26M/2M)=0.496

 5.868 0.999 0.994 0.974 0.960 0.957 0.984 Mlig455_034172 {REF} {Length: 956} {TRANSSPLICED} {Pfam: Dienelactone hydrolase family [PF01738.20, score=42.0]} {Smed: dd_Smed_v6_2062_0_1, dd_Smed_v6_2062_0_1, [Score=127, Expect=5e-36]} {RNA1509_23310, RNA1509_47952} {RNA1310_33560, RNA1509_23310} {RNA1509_23310, RNA815_22422}
3. MligTC455_36876 1344 28 Mlig455_050382

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.715

Region-enriched R5: 1.207/0.00006
Region-enriched R4: 1.032/0.02458

 3.532 0.988 0.967 0.819 0.758 - - Mlig455_050382 {REF} {Length: 958} {TRANSSPLICED} {Pfam: Dienelactone hydrolase family [PF01738.20, score=57.6]} {Smed: dd_Smed_v6_2062_0_1, dd_Smed_v6_2062_0_1, [RH, Score=170, Expect=3e-52]} {RNA1509_13663, RNA1509_37934, RNA1509_57231} {RNA1310_33560, RNA1509_13663, RNA1509_37934, RNA1509_57231} {RNA1509_13663, RNA1509_37934, RNA1509_57231, RNA815_22422}
4. MligTC455_41073 1438 29.97 Mlig455_060879

Neo: Int S/G2/M

Age: -

 G6PD 1.759 - - 0.954 - - 0.805 Mlig455_060879 {REF} {Length: 2111} {TRANSSPLICED} {Pfam: Glucose-6-phosphate dehydrogenase, C-terminal domain [PF02781.18, score=372.6]; Glucose-6-phosphate dehydrogenase, NAD binding domain [PF00479.24, score=202.8]} {Human: ENSG00000160211, G6PD, glucose-6-phosphate dehydrogenase, [RH, Score=641, Expect=0.0]} {Mouse: ENSMUSG00000031400, G6pdx, glucose-6-phosphate dehydrogenase X-linked, [RH, Score=642, Expect=0.0]; ENSMUSG00000089992, G6pd2, glucose-6-phosphate dehydrogenase 2, [RH, Score=616, Expect=0.0]} {Dmel: FBgn0004057, Zw, Zwischenferment, [RH, Score=592, Expect=0.0]} {Celegans: WBGene00007108, gspd-1, Glucose-6-phosphate 1-dehydrogenase, [RH, Score=627, Expect=0.0]} {Smed: dd_Smed_v6_2965_0_1, dd_Smed_v6_2965_0_1, [RH, Score=558, Expect=0.0]} {RNA1509_39585, RNA1509_56594} {RNA1310_12349.1, RNA1509_39585, RNA1509_56594} {RNA1509_39585, RNA1509_56594, RNA815_5701.1}
5. MligTC455_24048 3092 64.42 Mlig455_008833, Mlig455_008935

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.252

 HYPK 0.957 - - - - - 0.957

Mlig455_008833 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: HYPK UBA domain [PF19026.2, score=51.9]} {Human: ENSG00000242028, HYPK, huntingtin interacting protein K, [RH, Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000027245, Hypk, huntingtin interacting protein K, [RH, Score=64.3, Expect=1e-13]} {Dmel: FBgn0038196, CG9922, [RH, Score=52.4, Expect=3e-09]} {RNA1509_10390, RNA1509_54479} {RNA1310_31866, RNA1509_10390, RNA1509_54479} {RNA1509_10390, RNA1509_54479, RNA815_38606}

Mlig455_008935 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: HYPK UBA domain [PF19026.2, score=51.9]} {Human: ENSG00000242028, HYPK, huntingtin interacting protein K, [RH, Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000027245, Hypk, huntingtin interacting protein K, [RH, Score=64.3, Expect=1e-13]} {Dmel: FBgn0038196, CG9922, [RH, Score=52.4, Expect=3e-09]} {RNA1509_10375, RNA1509_10390} {RNA1310_31866, RNA1509_10375} {RNA1509_10375, RNA815_38606}
6. MligTC455_06329 736 15.34 Mlig455_008260, Mlig455_040624, Mlig455_040632

Neo: -

Age: Up-Down-Down

 OXSR1 0.953 - - - - - 0.953

Mlig455_008260 {REF} {Length: 4678} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=204.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=145.8]; Oxidative-stress-responsive kinase 1 C-terminal domain [PF12202.10, score=46.6]; Kinase-like [PF14531.8, score=27.1]; ABC1 atypical kinase-like domain [PF03109.18, score=20.6]; Fungal protein kinase [PF17667.3, score=18.9]} {Human: ENSG00000172939, OXSR1, oxidative stress responsive 1, [RH, Score=303, Expect=4e-95]; ENSG00000198648, STK39, serine/threonine kinase 39, [RH, Score=300, Expect=9e-94]} {Mouse: ENSMUSG00000036737, Oxsr1, oxidative-stress responsive 1, [RH, Score=303, Expect=2e-95]; ENSMUSG00000027030, Stk39, serine/threonine kinase 39, [RH, Score=299, Expect=2e-93]} {Dmel: FBgn0023083, fray, frayed, [RH, Score=322, Expect=2e-102]} {Celegans: WBGene00013355, gck-3, Germinal center kinase 3, [RH, Score=306, Expect=6e-96]} {Smed: dd_Smed_v6_1366_0_1, dd_Smed_v6_1366_0_1, [RH, Score=366, Expect=1e-120]} {RNA1509_21508} {RNA1310_10855} {RNA815_14970.1}

Mlig455_040624 {REF} {Length: 4652} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=204.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=145.8]; Oxidative-stress-responsive kinase 1 C-terminal domain [PF12202.10, score=46.6]; Kinase-like [PF14531.8, score=27.1]; ABC1 atypical kinase-like domain [PF03109.18, score=20.6]; Fungal protein kinase [PF17667.3, score=18.9]} {Human: ENSG00000172939, OXSR1, oxidative stress responsive 1, [RH, Score=303, Expect=4e-95]; ENSG00000198648, STK39, serine/threonine kinase 39, [RH, Score=300, Expect=9e-94]} {Mouse: ENSMUSG00000036737, Oxsr1, oxidative-stress responsive 1, [RH, Score=303, Expect=2e-95]; ENSMUSG00000027030, Stk39, serine/threonine kinase 39, [RH, Score=299, Expect=2e-93]} {Dmel: FBgn0023083, fray, frayed, [RH, Score=322, Expect=2e-102]} {Celegans: WBGene00013355, gck-3, Germinal center kinase 3, [RH, Score=306, Expect=6e-96]} {Smed: dd_Smed_v6_1366_0_1, dd_Smed_v6_1366_0_1, [RH, Score=366, Expect=1e-120]} {RNA1509_21508} {RNA1310_10855, RNA1509_21508} {RNA1509_21508, RNA815_14970.1}

Mlig455_040632 {REF} {Length: 4797} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=204.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=145.8]; Oxidative-stress-responsive kinase 1 C-terminal domain [PF12202.10, score=46.6]; Kinase-like [PF14531.8, score=27.1]; ABC1 atypical kinase-like domain [PF03109.18, score=20.6]; Fungal protein kinase [PF17667.3, score=18.9]} {Human: ENSG00000172939, OXSR1, oxidative stress responsive 1, [RH, Score=303, Expect=4e-95]; ENSG00000198648, STK39, serine/threonine kinase 39, [RH, Score=299, Expect=2e-93]} {Mouse: ENSMUSG00000036737, Oxsr1, oxidative-stress responsive 1, [RH, Score=303, Expect=2e-95]; ENSMUSG00000027030, Stk39, serine/threonine kinase 39, [RH, Score=299, Expect=2e-93]} {Dmel: FBgn0023083, fray, frayed, [RH, Score=322, Expect=2e-102]} {Celegans: WBGene00013355, gck-3, Germinal center kinase 3, [RH, Score=306, Expect=5e-96]} {Smed: dd_Smed_v6_1366_0_1, dd_Smed_v6_1366_0_1, [RH, Score=367, Expect=8e-121]} {RNA1509_21508} {RNA1310_10855} {RNA815_14970.1}

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