TomoSeq data search

Data search

Results for MligTC455_36918

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36918

506

10.55

Mlig455_040167

Neo: -

Age: logFC(26M/2M)=-0.225

Regeneration-upregulated R5: 2.028

Regeneration-enriched R5: 2.028

ERBB2

Mlig455_040167 {REF} {Length: 4315} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=262.6]; Protein kinase domain [PF00069.27, score=136.3]; Furin-like cysteine rich region [PF00757.22, score=66.7]; Growth factor receptor domain IV [PF14843.8, score=56.2]; Receptor L domain [PF01030.26, score=35.9]; Kinase-like [PF14531.8, score=20.2]} {Human: ENSG00000141736, ERBB2, erb-b2 receptor tyrosine kinase 2, [RH, Score=397, Expect=3e-118]} {Mouse: ENSMUSG00000062209, Erbb4, erb-b2 receptor tyrosine kinase 4, [Score=414, Expect=3e-124]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [Score=272, Expect=8e-75]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [Score=253, Expect=7e-69]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [Score=297, Expect=4e-83]} {RNA1509_4668} {RNA1310_1923.1, RNA1509_4668} {RNA1509_4668, RNA815_5649.1}

Cumulative graph for MligTC455_36918

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.328	3.53	0.22350	0.86713
RegionR2	0.236	3.53	0.65188	0.98646
RegionR3	0.215	3.53	0.60153	1.00000
RegionR4	-0.838	3.53	0.09942	0.30641
RegionR5	-1.266	3.53	0.00393	0.02897
RegionR6	-0.324	3.53	0.49564	1.00000
RegionR7	0.125	3.53	0.84818	1.00000
RegionR8	0.524	3.53	0.51922	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.937	3.53	0.42519	1.00000
RegenerationR2	1.238	3.53	0.00316	0.08588
RegenerationR3	0.973	3.53	0.03712	0.34026
RegenerationR4	1.207	3.53	0.01465	0.18967
RegenerationR5	2.028	3.53	0.00001	0.00400	Specific for R5: 2.028
RegenerationR6	1.122	3.53	0.02778	0.20838
RegenerationBL	1.017	3.53	0.07986	0.32999
RegenerationTP	0.769	3.53	0.22983	0.67485

Genes with expression patterns similar to MligTC455_36918

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36918	506	10.55	Mlig455_040167	Neo: - Age: logFC(26M/2M)=-0.225 Regeneration-upregulated R5: 2.028 Regeneration-enriched R5: 2.028	ERBB2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_040167 {REF} {Length: 4315} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=262.6]; Protein kinase domain [PF00069.27, score=136.3]; Furin-like cysteine rich region [PF00757.22, score=66.7]; Growth factor receptor domain IV [PF14843.8, score=56.2]; Receptor L domain [PF01030.26, score=35.9]; Kinase-like [PF14531.8, score=20.2]} {Human: ENSG00000141736, ERBB2, erb-b2 receptor tyrosine kinase 2, [RH, Score=397, Expect=3e-118]} {Mouse: ENSMUSG00000062209, Erbb4, erb-b2 receptor tyrosine kinase 4, [Score=414, Expect=3e-124]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [Score=272, Expect=8e-75]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [Score=253, Expect=7e-69]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [Score=297, Expect=4e-83]} {RNA1509_4668} {RNA1310_1923.1, RNA1509_4668} {RNA1509_4668, RNA815_5649.1}
2.	Mlig999008.1						1.899	-	-	0.966	-	0.933	-
3.	MligTC455_28982	15213	316.93	Mlig455_025642	Neo: - Age: Down-Up-Down, logFC(26M/2M)=2.852		1.809	-	-	0.958	-	0.851	-	Mlig455_025642 {REF} {Length: 195} {NoTransDecoderORF} {RNA1509_892} {RNA1310_53106.5} {RNA815_11555.1}
4.	MligTC455_47886	409	8.53	Mlig455_052268, Mlig455_052359	Neo: - Age: Up-Down-Down		1.672	-	-	0.970	0.702	-	-	Mlig455_052268 {REF} {Length: 3338} {RNA1509_40745} {RNA1310_7619} {RNA815_36192} Mlig455_052359 {REF} {Length: 5246} {RNA1509_40745} {RNA1310_7619, RNA1509_40745} {RNA1509_40745, RNA815_36192}
5.	MligTC455_50968	639	13.32	Mlig455_054324	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.314	SH3BGRL3	0.975	-	-	-	-	0.975	-	Mlig455_054324 {REF} {Length: 1692} {Pfam: SH3-binding, glutamic acid-rich protein [PF04908.17, score=75.2]} {Human: ENSG00000142669, SH3BGRL3, SH3 domain binding glutamate rich protein like 3, [Score=53.5, Expect=8e-09]} {Mouse: ENSMUSG00000028843, Sh3bgrl3, SH3 domain binding glutamic acid-rich protein-like 3, [Score=58.5, Expect=8e-11]} {Dmel: FBgn0035772, Sh3beta, [Score=60.1, Expect=2e-10]} {Celegans: WBGene00013666, Y105E8A.1, [RH, Score=59.3, Expect=5e-11]} {Smed: dd_Smed_v6_4404_0_1, dd_Smed_v6_4404_0_1, [Score=97.4, Expect=1e-23]} {RNA1509_39577, RNA1509_41483} {RNA1310_36951, RNA1509_39577, RNA1509_41483} {RNA1509_39577, RNA1509_41483, RNA815_11322.1}
6.	MligTC455_47992	563	11.74	Mlig455_015958	Neo: - Age: logFC(26M/2M)=-0.410		0.968	-	-	0.968	-	-	-	Mlig455_015958 {REF} {Length: 1791} {RNA1509_42700} {RNA1310_16371} {RNA815_7032.1}
7.	MligTC455_48561	779	16.24	Mlig455_034702, Mlig455_034755	Neo: - Age: -	FABP4	0.968	-	-	-	-	0.968	-	Mlig455_034702 {REF} {Length: 723} {Human: ENSG00000170323, FABP4, fatty acid binding protein 4, [Score=43.9, Expect=8e-06]} {RNA1509_39777} {RNA1310_54956} {RNA815_27929.1} Mlig455_034755 {REF} {Length: 924} {Human: ENSG00000170323, FABP4, fatty acid binding protein 4, [Score=43.9, Expect=8e-06]} {RNA1509_39777} {RNA1310_54956, RNA1509_39777} {RNA1509_39777, RNA815_27929.1}
8.	MligTC455_11609	284	5.92	Mlig455_070575	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_070575 {REF} {Length: 3293} {TRANSSPLICED} {Pfam: Cysteine and tyrosine-rich protein 1 [PF10873.10, score=23.2]} {RNA1509_18810, RNA1509_40814} {RNA1310_7682.1, RNA1509_18810, RNA1509_40814} {RNA1509_18810, RNA1509_40814, RNA815_11219}
9.	MligTC455_17001	243	5.06	Mlig455_058536	Neo: - Age: -	PDHX	0.956	-	-	-	-	0.956	-	Mlig455_058536 {REF} {Length: 3130} {Pfam: Biotin-requiring enzyme [PF00364.24, score=58.5]; e3 binding domain [PF02817.19, score=21.9]} {Human: ENSG00000110435, PDHX, pyruvate dehydrogenase complex component X, [Score=120, Expect=1e-28]} {Mouse: ENSMUSG00000010914, Pdhx, pyruvate dehydrogenase complex, component X, [Score=132, Expect=8e-33]} {Dmel: FBgn0283658, muc, midline uncoordinated, [Score=76.6, Expect=1e-14]} {Celegans: WBGene00009082, dlat-1, Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial, [Score=87.4, Expect=4e-18]} {Smed: dd_Smed_v6_4750_0_1, dd_Smed_v6_4750_0_1, [Score=144, Expect=8e-38]} {RNA1509_34085} {RNA1310_25322, RNA1509_34085} {RNA1509_34085, RNA815_22388}
10.	MligTC455_26556	96	1.99	Mlig455_067311	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.885	RRAGB	0.956	-	-	-	-	0.956	-	Mlig455_067311 {REF} {Length: 1649} {TRANSSPLICED} {Pfam: Gtr1/RagA G protein conserved region [PF04670.14, score=350.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=38.2]; Ras family [PF00071.24, score=33.9]; ADP-ribosylation factor family [PF00025.23, score=31.4]; 50S ribosome-binding GTPase [PF01926.25, score=28.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=20.0]} {Human: ENSG00000083750, RRAGB, Ras related GTP binding B, [RH, Score=502, Expect=3e-180]; ENSG00000155876, RRAGA, Ras related GTP binding A, [RH, Score=501, Expect=2e-180]} {Mouse: ENSMUSG00000070934, Rraga, Ras-related GTP binding A, [RH, Score=501, Expect=1e-180]; ENSMUSG00000041658, Rragb, Ras-related GTP binding B, [RH, Score=489, Expect=5e-175]} {Dmel: FBgn0037647, RagA-B, Ras-related GTP binding A/B, [RH, Score=479, Expect=3e-172]} {Celegans: WBGene00006414, raga-1, RAs-related GTP-binding protein A, [RH, Score=427, Expect=1e-151]} {Smed: dd_Smed_v6_4388_0_1, dd_Smed_v6_4388_0_1, [RH, Score=434, Expect=1e-154]} {RNA1509_11083} {RNA1310_13012} {RNA815_15460}
11.	MligTC455_49920	1391	28.97	Mlig455_031971	Neo: - Age: Down-Up-Up Region-enriched R2: 1.788/0.00001		0.956	-	-	-	-	0.956	-	Mlig455_031971 {REF} {Length: 2277} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=88.2]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [RH, Score=144, Expect=1e-44]} {RNA1509_17596} {RNA1310_16500} {RNA815_24033.1}
12.	MligTC455_39054	393	8.19	Mlig455_027098	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_027098 {REF} {Length: 3225} {TRANSSPLICED} {RNA1509_25890} {RNA1310_34328} {RNA815_25249}
13.	MligTC455_41091	430	8.97	Mlig455_034010	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=0.291	MFSD2A	0.955	-	-	-	0.955	-	-	Mlig455_034010 {REF} {Length: 4857} {TRANSSPLICED} {Pfam: MFS/sugar transport protein [PF13347.8, score=279.8]; Major Facilitator Superfamily [PF07690.18, score=41.3]; Sugar (and other) transporter [PF00083.26, score=19.9]} {Human: ENSG00000168389, MFSD2A, major facilitator superfamily domain containing 2A, [Score=248, Expect=6e-74]} {Mouse: ENSMUSG00000028655, Mfsd2a, major facilitator superfamily domain containing 2A, [Score=245, Expect=8e-73]} {Smed: dd_Smed_v6_11210_0_1, dd_Smed_v6_11210_0_1, [Score=283, Expect=4e-87]} {RNA1509_14841} {RNA1310_5304} {RNA815_20517}
14.	MligTC455_11608	280	5.84	Mlig455_001322	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_001322 {REF} {Length: 652} {Pfam: RRM-like domain [PF11835.10, score=21.4]} {RNA1509_36309} {RNA1310_7682.1} {RNA815_30014}

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