Data search
Results for MligTC455_37001
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_37001 | 10 | 0.20 | Mlig455_012483, Mlig455_019770, Mlig455_063060, Mlig455_063062 | Neo: - Age: - |
Mlig455_012483 {REF} {Length: 90} {NoTransDecoderORF} {RNA1509_49771} {RNA1310_36394} {RNA815_31236.1} Mlig455_019770 {REF} {Length: 1529} {NoTransDecoderORF} {RNA1509_49771} {RNA1310_36394} {RNA815_31236.1} Mlig455_063060 {REF} {Length: 185} {NoTransDecoderORF} {RNA1509_49771} {RNA1310_34567} {RNA815_31236.1} Mlig455_063062 {REF} {Length: 107} {NoTransDecoderORF} {RNA1509_49771} {RNA1310_36394} {RNA815_31236.1} |
Cumulative graph for MligTC455_37001
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_37001
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_37001 | 10 | 0.2 | Mlig455_012483, Mlig455_019770, Mlig455_063060, Mlig455_063062 | Neo: - Age: - |
2 | - | - | - | - | 1.000 | 1.000 | Mlig455_012483 {REF} {Length: 90} {NoTransDecoderORF} {RNA1509_49771} {RNA1310_36394} {RNA815_31236.1} Mlig455_019770 {REF} {Length: 1529} {NoTransDecoderORF} {RNA1509_49771} {RNA1310_36394} {RNA815_31236.1} Mlig455_063060 {REF} {Length: 185} {NoTransDecoderORF} {RNA1509_49771} {RNA1310_34567} {RNA815_31236.1} Mlig455_063062 {REF} {Length: 107} {NoTransDecoderORF} {RNA1509_49771} {RNA1310_36394} {RNA815_31236.1} |
|
| 2. | MligTC455_03942 | 7 | 0.15 | Mlig455_049469 | Neo: - Age: Down-Down-Up |
0.993 | - | - | - | - | - | 0.993 | Mlig455_049469 {REF} {Length: 367} {NoTransDecoderORF} {RNA1509_35184} {RNA1310_31249} {RNA815_18932.1} | |
| 3. | MligTC455_21717 | 38 | 0.8 | Mlig455_017580, Mlig455_058853 | Neo: - Age: - |
KCNC1 | 0.987 | - | - | - | - | - | 0.987 | Mlig455_017580 {REF} {Length: 4770} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=124.3]; BTB/POZ domain [PF02214.24, score=104.7]; Ion channel [PF07885.18, score=36.8]; BTB/POZ domain [PF16017.7, score=23.2]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=357, Expect=2e-113]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=346, Expect=4e-109]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=357, Expect=9e-114]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=400, Expect=1e-131]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=380, Expect=2e-123]} {Smed: dd_Smed_v6_26861_0_1, dd_Smed_v6_26861_0_1, [RH, Score=446, Expect=3e-148]} {RNA1509_17350} {RNA1310_54118} {RNA815_33188} Mlig455_058853 {REF} {Length: 399} {NoTransDecoderORF} {RNA1310_98941} {RNA815_33188} |
| 4. | MligTC455_13583 | 31 | 0.64 | Mlig455_052529, Mlig455_069099 | Neo: - Age: - |
0.979 | - | - | - | - | - | 0.979 | Mlig455_052529 {REF} {Length: 376} {NoTransDecoderORF} {RNA1310_49408} {RNA815_48802} Mlig455_069099 {REF} {Length: 381} {NoTransDecoderORF} {RNA1310_49408} {RNA815_48802} |
|
| 5. | MligTC455_25241 | 77 | 1.6 | Mlig455_050255 | Neo: - Age: Down-Up-Down |
0.972 | - | - | - | - | - | 0.972 | Mlig455_050255 {REF} {Length: 2130} {RNA1509_55156} {RNA1310_40171.1, RNA1509_55156} {RNA1509_55156, RNA815_28163} | |
| 6. | MligTC455_13578 | 31 | 0.64 | Mlig455_033426 | Neo: - Age: - |
0.962 | - | - | - | - | 0.962 | - | Mlig455_033426 {REF} {Length: 1654} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46373} {RNA1310_27600.1} {RNA815_28149} | |
| 7. | MligTC455_31664 | 87 | 1.8 | Mlig455_027842 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.990 Region-enriched R3: 3.194/0.01703 |
0.958 | - | - | - | - | 0.958 | - | Mlig455_027842 {REF} {Length: 5811} {RNA1509_39420} {RNA1310_33165, RNA1509_39420} {RNA1509_39420, RNA815_15436.1} | |
| 8. | MligTC455_23374 | 134 | 2.78 | Mlig455_016409 | Neo: - Age: - |
CDC34 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_016409 {REF} {Length: 5157} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=154.3]} {Human: ENSG00000099804, CDC34, cell division cycle 34, [RH, Score=280, Expect=2e-95]; ENSG00000107341, UBE2R2, ubiquitin conjugating enzyme E2 R2, [RH, Score=277, Expect=4e-94]} {Mouse: ENSMUSG00000020307, Cdc34, cell division cycle 34, [RH, Score=279, Expect=6e-95]; ENSMUSG00000036241, Ube2r2, ubiquitin-conjugating enzyme E2R 2, [RH, Score=277, Expect=3e-94]; ENSMUSG00000020870, Cdc34b, cell division cycle 34B, [RH, Score=273, Expect=1e-92]} {Dmel: FBgn0036516, CG7656, [RH, Score=281, Expect=1e-94]} {Celegans: WBGene00006702, ubc-3, UBiquitin Conjugating enzyme, [RH, Score=264, Expect=3e-89]} {Smed: dd_Smed_v6_8367_0_1, dd_Smed_v6_8367_0_1, [RH, Score=259, Expect=3e-87]} {RNA1509_31608} {RNA1310_20391} {RNA815_14254} |
| 9. | MligTC455_14099 | 146 | 3.05 | Mlig455_013550 | Neo: Irradiation Age: - Region-enriched R4: 3.876/0.00000 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_013550 {REF} {Length: 1224} {NoTransDecoderORF} {RNA1509_43167} {RNA1310_35284, RNA1509_43167} {RNA1509_43167, RNA815_31876} | |
| 10. | MligTC455_30751 | 5 | 0.1 | Mlig455_051059, Mlig455_063039 | Neo: - Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_051059 {REF} {Length: 617} {Smed: dd_Smed_v6_12148_0_1, dd_Smed_v6_12148_0_1, [Score=43.9, Expect=5e-06]} {RNA1509_31688} {RNA1310_25830} {RNA815_3607} Mlig455_063039 {REF} {Length: 1907} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=75.9, Expect=6e-16]} {RNA1509_7841} {RNA1310_55024} {RNA815_3607} |
|
| 11. | MligTC455_30804 | 48 | 1 | Mlig455_069857 | Neo: Irradiation Age: logFC(26M/2M)=-1.954 Region-enriched R5: 4.145/0.00026 |
PIF1 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_069857 {REF} {Length: 6831} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=313.4]; Helitron helicase-like domain at N-terminus [PF14214.8, score=114.0]; AAA domain [PF13604.8, score=44.8]; Helicase [PF02689.16, score=22.8]; UvrD-like helicase C-terminal domain [PF13538.8, score=22.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=84.0, Expect=1e-15]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=88.6, Expect=3e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=77.8, Expect=5e-14]} {Celegans: WBGene00018020, F33H12.6, [Score=688, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=90.5, Expect=4e-18]} {RNA1509_33821} {RNA1310_13678} {RNA815_358.1} |
| 12. | MligTC455_36799 | 226 | 4.71 | Mlig455_070607 | Neo: - Age: - Region-enriched R6: 2.397/0.01896 |
NAALAD2 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_070607 {REF} {Length: 3722} {Pfam: Peptidase family M28 [PF04389.19, score=56.8]} {Human: ENSG00000285516, NAALAD2, N-acetylated alpha-linked acidic dipeptidase 2, [Score=198, Expect=2e-53]; ENSG00000077616, NAALAD2, N-acetylated alpha-linked acidic dipeptidase 2, [Score=198, Expect=2e-53]} {Mouse: ENSMUSG00000043943, Naalad2, N-acetylated alpha-linked acidic dipeptidase 2, [Score=174, Expect=6e-45]} {Celegans: WBGene00007954, gcp-2.2, See cpr, [Score=151, Expect=7e-38]} {RNA1509_24915, RNA1509_48328} {RNA1310_6969, RNA1509_24915, RNA1509_48328} {RNA1509_24915, RNA1509_48328, RNA815_14331} |
| 13. | MligTC455_46453 | 12 | 0.25 | Mlig455_041607 | Neo: - Age: - |
SLC33A1 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_041607 {REF} {Length: 2163} {TRANSSPLICED} {Pfam: Acetyl-coenzyme A transporter 1 [PF13000.9, score=353.2]} {Human: ENSG00000169359, SLC33A1, solute carrier family 33 member 1, [RH, Score=434, Expect=5e-146]} {Mouse: ENSMUSG00000027822, Slc33a1, solute carrier family 33 (acetyl-CoA transporter), member 1, [RH, Score=434, Expect=5e-146]} {Dmel: FBgn0036662, CG9706, [RH, Score=414, Expect=8e-139]} {Celegans: WBGene00012033, T26C5.3, [RH, Score=405, Expect=4e-135]} {Smed: dd_Smed_v6_6308_0_1, dd_Smed_v6_6308_0_1, [RH, Score=501, Expect=5e-173]} {RNA1509_8415} {RNA1310_9664, RNA1509_8415} {RNA1509_8415, RNA815_3329.1} |
| 14. | MligTC455_31988 | 108 | 2.24 | Mlig455_053206 | Neo: - Age: Down-Up-Down |
PCDH11Y | 0.955 | - | - | - | - | - | 0.955 | Mlig455_053206 {REF} {Length: 3665} {Pfam: Cadherin domain [PF00028.19, score=208.2]; Cadherin-like [PF08266.14, score=23.6]; Cadherin-like [PF16184.7, score=22.0]; Bacterial cadherin-like domain [PF17803.3, score=19.6]} {Human: ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=238, Expect=1e-63]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=234, Expect=1e-62]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=231, Expect=1e-61]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=229, Expect=1e-61]} {Dmel: FBgn0024836, stan, starry night, [Score=223, Expect=8e-59]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=163, Expect=2e-40]} {Smed: dd_Smed_v6_12023_0_1, dd_Smed_v6_12023_0_1, [RH, Score=330, Expect=4e-97]} {RNA1509_35685} {RNA1310_2716.1} {RNA815_1549} |