Data search


search
Exact
Search

Results for MligTC455_37014

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37014 46 0.95 Mlig455_016716

Neo: -

Age: -

Mlig455_016716 {REF} {Length: 3902} {NoTransDecoderORF} {RNA1310_119020} {RNA815_33376}

Cumulative graph for MligTC455_37014

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.048 1.111 0.99983 1.00000
RegionR2 2.29 1.111 0.22090 0.58980
RegionR3 1.353 1.111 0.31273 0.85225
RegionR4 -1.239 1.111 0.99980 1.00000
RegionR5 -1.169 1.111 0.99976 1.00000
RegionR6 1.777 1.111 0.20414 0.77795
RegionR7 -1.183 1.111 0.99998 1.00000
RegionR8 -0.781 1.111 0.99989 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.78 1.111 0.99982 1.00000
RegenerationR2 1.747 1.111 0.29588 0.73831
RegenerationR3 0.559 1.111 0.78452 0.97724
RegenerationR4 1.791 1.111 0.24205 0.69055
RegenerationR5 3.81 1.111 0.04823 0.35527
RegenerationR6 -0.23 1.111 0.85521 1.00000
RegenerationBL 2.901 1.111 0.26932 0.62830
RegenerationTP 4.588 1.111 0.14410 0.56574


Genes with expression patterns similar to MligTC455_37014

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37014 46 0.95 Mlig455_016716

Neo: -

Age: -

3 - - 1.000 - 1.000 1.000 Mlig455_016716 {REF} {Length: 3902} {NoTransDecoderORF} {RNA1310_119020} {RNA815_33376}
2. MligTC455_29067 766 15.96 Mlig455_052924, Mlig455_062051

Neo: -

Age: -

1.922 - - - - 0.942 0.980

Mlig455_052924 {REF} {Length: 5034} {Pfam: PHD-finger [PF00628.31, score=24.4]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=22.7]; PHD - plant homeodomain finger protein [PF07227.13, score=19.7]} {RNA1509_29353} {RNA1310_4523} {RNA815_17419}

Mlig455_062051 {REF} {Length: 5910} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=82.0]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=94.4, Expect=3e-21]} {RNA1509_23986} {RNA1310_4523} {RNA815_17419}
3. MligTC455_29066 215 4.47 Mlig455_043845

Neo: -

Age: -

1.911 - - - - 0.963 0.948 Mlig455_043845 {REF} {Length: 3707} {TRANSSPLICED} {RNA1509_13168} {RNA1310_4523} {RNA815_5087}
4. MligTC455_29001 278 5.79 Mlig455_016755

Neo: -

Age: -

1.883 - - - - 0.922 0.961 Mlig455_016755 {REF} {Length: 5393} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=63.1]} {Smed: dd_Smed_v6_13734_0_20, dd_Smed_v6_13734_0_20, [Score=50.1, Expect=1e-07]} {RNA1509_13072} {RNA1310_4523} {RNA815_17419}
5. MligTC455_11495 71 1.49 Mlig455_038430

Neo: -

Age: -

1.814 - - - - 0.954 0.860 Mlig455_038430 {REF} {Length: 443} {NoTransDecoderORF} {RNA1509_51837} {RNA1310_23145} {RNA815_41033.2}
6. MligTC455_31898 84 1.76 Mlig455_030705

Neo: -

Age: -

1.773 - - - - 0.959 0.814 Mlig455_030705 {REF} {Length: 6466} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=28.6]} {RNA1509_5045} {RNA1310_667.3} {RNA815_350}
7. MligTC455_52753 76 1.57 Mlig455_063006

Neo: -

Age: -

1.767 - - - - 0.952 0.815 Mlig455_063006 {REF} {Length: 1514} {Pfam: Family of unknown function (DUF5358) [PF17311.4, score=24.7]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_7717.1}
8. MligTC455_45432 647 13.49 Mlig455_033896

Neo: -

Age: logFC(26M/2M)=-0.262

PRKAR1A 1.742 - - - - 0.977 0.765 Mlig455_033896 {REF} {Length: 4119} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=78.8]} {Human: ENSG00000108946, PRKAR1A, protein kinase cAMP-dependent type I regulatory subunit alpha, [Score=53.5, Expect=7e-07]} {Mouse: ENSMUSG00000020612, Prkar1a, protein kinase, cAMP dependent regulatory, type I, alpha, [Score=52.4, Expect=1e-06]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=57.4, Expect=2e-08]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [Score=57.4, Expect=2e-08]} {Smed: dd_Smed_v6_13623_0_1, dd_Smed_v6_13623_0_1, [RH, Score=446, Expect=3e-147]} {RNA1509_7481} {RNA1310_4517, RNA1509_7481} {RNA1509_7481, RNA815_741.1}
9. MligTC455_43608 32 0.68 Mlig455_022119

Neo: -

Age: -

0.98 - - - - 0.980 - Mlig455_022119 {REF} {Length: 1506} {NoTransDecoderORF} {RNA1509_46209} {RNA1310_74551} {RNA815_20255}
10. MligTC455_00352 167 3.49 Mlig455_050991

Neo: -

Age: -

0.979 - - - - - 0.979 Mlig455_050991 {REF} {Length: 1036} {NoTransDecoderORF}
11. MligTC455_29400 63 1.31 Mlig455_057781

Neo: -

Age: -

0.975 - - - - - 0.975 Mlig455_057781 {REF} {Length: 1746} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_51690} {RNA815_64986}
12. MligTC455_30411 96 2 Mlig455_063337

Neo: -

Age: -

0.968 - - 0.968 - - - Mlig455_063337 {REF} {Length: 1074} {NoTransDecoderORF} {RNA1509_16790} {RNA1310_41414} {RNA815_9260.1}
13. MligTC455_07285 48 1 Mlig455_045441

Neo: -

Age: -

0.964 - - - - - 0.964 Mlig455_045441 {REF} {Length: 504} {NoTransDecoderORF}
14. MligTC455_30275 491 10.22 Mlig455_030075, Mlig455_036671

Neo: -

Age: -

Regeneration-upregulated BL: 3.836

Regeneration-enriched BL: 3.836

0.96 - - - - - 0.960

Mlig455_030075 {REF} {Length: 336} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=18.6]} {Celegans: WBGene00022511, ZC53.4, [Score=84.3, Expect=3e-20]} {Smed: dd_Smed_v6_23154_0_1, dd_Smed_v6_23154_0_1, [Score=120, Expect=2e-34]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_036671 {REF} {Length: 810} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=34.0]} {Celegans: WBGene00022511, ZC53.4, [Score=151, Expect=3e-41]} {Smed: dd_Smed_v6_23154_0_1, dd_Smed_v6_23154_0_1, [Score=174, Expect=5e-53]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1}
15. MligTC455_06955 88 1.84 Mlig455_050469

Neo: -

Age: -

0.959 - - - - - 0.959 Mlig455_050469 {REF} {Length: 479}
16. MligTC455_13849 39 0.82 Mlig455_001507

Neo: -

Age: -

0.958 - - - - - 0.958 Mlig455_001507 {REF} {Length: 761} {NoTransDecoderORF}
17. MligTC455_30270 406 8.46 Mlig455_012719, Mlig455_044289

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 4.823

Regeneration-enriched BL: 4.823

0.957 - - - - 0.957 -

Mlig455_012719 {REF} {Length: 392} {RNA1509_16349} {RNA1310_2575}

Mlig455_044289 {REF} {Length: 4784} {RNA1509_16349} {RNA1310_2575} {RNA815_3500.1}
18. MligTC455_32505 33 0.69 Mlig455_030857

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_030857 {REF} {Length: 3123} {RNA1509_52584} {RNA1310_46531} {RNA815_28242}
19. MligTC455_28066 54 1.13 Mlig455_046514

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_046514 {REF} {Length: 2208} {NoTransDecoderORF} {RNA1509_60018} {RNA1310_100111} {RNA815_22045}
20. MligTC455_20623 991 20.64 Mlig455_042571

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_042571 {REF} {Length: 735} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11208, RNA1509_11299, RNA1509_3, RNA1509_33767, RNA1509_58353} {RNA1310_14828.1, RNA1509_11208, RNA1509_11299, RNA1509_33767, RNA1509_58353} {RNA1509_11208, RNA1509_11299, RNA1509_33767, RNA1509_58353, RNA815_44673}
21. MligTC455_15543 50 1.03 Mlig455_028167

Neo: -

Age: -

Region-enriched R2: 5.866/0.00492
Region-enriched R3: 4.230/0.03239

ADRA2A 0.951 - - - - 0.951 - Mlig455_028167 {REF} {Length: 2816} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=224.6]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=49.7]; Olfactory receptor [PF13853.8, score=23.0]} {Human: ENSG00000150594, ADRA2A, adrenoceptor alpha 2A, [Score=205, Expect=1e-60]; ENSG00000274286, ADRA2B, adrenoceptor alpha 2B, [Score=199, Expect=1e-58]; ENSG00000149295, DRD2, dopamine receptor D2, [Score=196, Expect=2e-57]} {Mouse: ENSMUSG00000058620, Adra2b, adrenergic receptor, alpha 2b, [Score=209, Expect=2e-62]; ENSMUSG00000033717, Adra2a, adrenergic receptor, alpha 2a, [Score=208, Expect=6e-62]} {Dmel: FBgn0053517, Dop2R, Dopamine 2-like receptor, [Score=197, Expect=2e-55]} {Celegans: WBGene00004777, ser-2, Tyramine receptor Ser-2, [Score=242, Expect=4e-75]} {Smed: dd_Smed_v6_48706_0_1, dd_Smed_v6_48706_0_1, [Score=205, Expect=1e-61]} {RNA1310_29477}
22. MligTC455_30123 72 1.49 Mlig455_034831

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_034831 {REF} {Length: 2577} {TRANSSPLICED} {RNA1509_19670} {RNA1310_28603.1} {RNA815_23469.1}
23. MligTC455_54343 138 2.87 Mlig455_045793

Neo: -

Age: Down-Up-Down

CCDC74B 0.951 - - - - 0.951 - Mlig455_045793 {REF} {Length: 1939} {TRANSSPLICED} {Pfam: Coiled-coil domain of unknown function [PF14916.8, score=48.3]; Coiled coil protein 74, C terminal [PF14917.8, score=28.5]} {Human: ENSG00000152076, CCDC74B, coiled-coil domain containing 74B, [Score=48.1, Expect=8e-06]; ENSG00000163040, CCDC74A, coiled-coil domain containing 74A, [Score=48.1, Expect=9e-06]} {Mouse: ENSMUSG00000041617, Ccdc74a, coiled-coil domain containing 74A, [RH, Score=48.5, Expect=3e-07]} {RNA1509_40595} {RNA1310_26197} {RNA815_7738.1}
24. MligTC455_45057 3368 70.17 Mlig455_066217

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.020

Region-enriched R4: 2.409/0.00488

SQSTM1 0.95 - - - - 0.950 - Mlig455_066217 {REF} {Length: 2156} {Pfam: PB1 domain [PF00564.26, score=48.6]; Zinc finger, ZZ type [PF00569.19, score=39.6]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [Score=73.6, Expect=3e-14]; ENSG00000284099, AC008393.2, sequestosome 1, [Score=73.6, Expect=3e-14]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [Score=72.4, Expect=4e-14]} {Dmel: FBgn0037655, Kcmf1, Potassium channel modulatory factor 1, [Score=53.9, Expect=7e-08]} {Celegans: WBGene00015552, C06G3.6, [RH, Score=57.0, Expect=5e-09]} {Smed: dd_Smed_v6_9359_0_1, dd_Smed_v6_9359_0_1, [Score=53.9, Expect=3e-08]} {RNA1509_7650} {RNA1310_24868.1} {RNA815_29328}
25. MligTC455_49709 228 4.74 Mlig455_024769, Mlig455_038951

Neo: -

Age: -

0.95 - - - - - 0.950

Mlig455_024769 {REF} {Length: 560} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.8]} {Smed: dd_Smed_v6_19123_0_8, dd_Smed_v6_19123_0_8, [Score=73.9, Expect=1e-15]} {RNA1509_31268} {RNA1310_89323} {RNA815_51068}

Mlig455_038951 {REF} {Length: 1037} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=74.6]} {Smed: dd_Smed_v6_19123_0_4, dd_Smed_v6_19123_0_4, [Score=60.8, Expect=4e-10]} {RNA1509_31268} {RNA1310_10452.2} {RNA815_28501}
26. MligTC455_53944 212 4.41 Mlig455_000881

Neo: -

Age: -

0.95 - - - - - 0.950 Mlig455_000881 {REF} {Length: 1210} {NoTransDecoderORF} {RNA1509_4809} {RNA1310_856.2} {RNA815_22431}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA