TomoSeq data search

Data search

Results for MligTC455_37032

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37032

774

16.13

Mlig455_020703

Neo: -

Age: -

SPATA20

Mlig455_020703 {REF} {Length: 3315} {TRANSSPLICED} {Pfam: Protein of unknown function, DUF255 [PF03190.17, score=235.0]; Thioredoxin-like [PF13899.8, score=34.9]} {Human: ENSG00000006282, SPATA20, spermatogenesis associated 20, [RH, Score=526, Expect=6e-176]} {Mouse: ENSMUSG00000020867, Spata20, spermatogenesis associated 20, [RH, Score=516, Expect=2e-172]} {Dmel: FBgn0033924, CG8613, [RH, Score=516, Expect=3e-172]} {Celegans: WBGene00015204, B0495.5, [RH, Score=501, Expect=1e-167]} {RNA1509_45408, RNA1509_9688} {RNA1310_7205.1, RNA1509_45408, RNA1509_9688} {RNA1509_45408, RNA1509_9688, RNA815_4898}

Cumulative graph for MligTC455_37032

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.078	4.24	0.92489	1.00000
RegionR2	0.995	4.24	0.05833	0.29072
RegionR3	0.28	4.24	0.49370	0.99068
RegionR4	-0.414	4.24	0.41672	0.74422
RegionR5	-0.491	4.24	0.21779	0.51839
RegionR6	-0.029	4.24	0.94884	1.00000
RegionR7	-0.186	4.24	0.71225	1.00000
RegionR8	-0.077	4.24	0.90075	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.027	4.24	0.98826	1.00000
RegenerationR2	-0.002	4.24	0.99748	1.00000
RegenerationR3	0.323	4.24	0.54997	0.88348
RegenerationR4	-0.165	4.24	0.77154	0.97700
RegenerationR5	0.156	4.24	0.76001	0.97571
RegenerationR6	-0.844	4.24	0.17789	0.51179
RegenerationBL	-0.024	4.24	0.97139	1.00000
RegenerationTP	-0.105	4.24	0.88133	1.00000

Genes with expression patterns similar to MligTC455_37032

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37032	774	16.13	Mlig455_020703	Neo: - Age: -	SPATA20	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020703 {REF} {Length: 3315} {TRANSSPLICED} {Pfam: Protein of unknown function, DUF255 [PF03190.17, score=235.0]; Thioredoxin-like [PF13899.8, score=34.9]} {Human: ENSG00000006282, SPATA20, spermatogenesis associated 20, [RH, Score=526, Expect=6e-176]} {Mouse: ENSMUSG00000020867, Spata20, spermatogenesis associated 20, [RH, Score=516, Expect=2e-172]} {Dmel: FBgn0033924, CG8613, [RH, Score=516, Expect=3e-172]} {Celegans: WBGene00015204, B0495.5, [RH, Score=501, Expect=1e-167]} {RNA1509_45408, RNA1509_9688} {RNA1310_7205.1, RNA1509_45408, RNA1509_9688} {RNA1509_45408, RNA1509_9688, RNA815_4898}
2.	MligTC455_22027	906	18.88	Mlig455_009586	Neo: - Age: -	USP49	1.831	-	-	-	-	0.880	0.951	Mlig455_009586 {REF} {Length: 4256} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=195.9]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=64.0]} {Human: ENSG00000164663, USP49, ubiquitin specific peptidase 49, [Score=278, Expect=3e-84]; ENSG00000136014, USP44, ubiquitin specific peptidase 44, [Score=273, Expect=6e-82]} {Mouse: ENSMUSG00000090115, Usp49, ubiquitin specific peptidase 49, [Score=284, Expect=2e-86]; ENSMUSG00000020020, Usp44, ubiquitin specific peptidase 44, [Score=283, Expect=6e-86]} {Dmel: FBgn0038862, Usp8, Ubiquitin specific protease 8, [Score=108, Expect=2e-25]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [Score=94.0, Expect=8e-20]} {Smed: dd_Smed_v6_6489_0_1, dd_Smed_v6_6489_0_1, [Score=125, Expect=6e-30]} {RNA1509_12069, RNA1509_24259, RNA1509_25953, RNA1509_39809} {RNA1310_7678.1, RNA1509_12069, RNA1509_24259, RNA1509_25953, RNA1509_39809} {RNA1509_12069, RNA1509_24259, RNA1509_25953, RNA1509_39809, RNA815_3720}
3.	MligTC455_45429	764	15.92	Mlig455_000855	Neo: - Age: -	CAND1	0.969	-	-	-	-	0.969	-	Mlig455_000855 {REF} {Length: 5555} {Pfam: TATA-binding protein interacting (TIP20) [PF08623.12, score=154.4]; Adaptin N terminal region [PF01602.22, score=39.6]; HEAT repeats [PF13646.8, score=33.6]; UME (NUC010) domain [PF08064.15, score=25.1]} {Human: ENSG00000111530, CAND1, cullin associated and neddylation dissociated 1, [RH, Score=895, Expect=0.0]} {Mouse: ENSMUSG00000020114, Cand1, cullin associated and neddylation disassociated 1, [RH, Score=892, Expect=0.0]} {Dmel: FBgn0027568, Cand1, Cullin-associated and neddylation-dissociated 1, [RH, Score=796, Expect=0.0]} {Celegans: WBGene00013606, cand-1, Cullin-associated NEDD8-dissociated protein 1, [RH, Score=466, Expect=1e-141]} {Smed: dd_Smed_v6_6507_0_1, dd_Smed_v6_6507_0_1, [RH, Score=629, Expect=0.0]} {RNA1509_16395, RNA1509_4060} {RNA1310_1644.1, RNA1509_16395} {RNA1509_16395, RNA815_456}
4.	MligTC455_10961	332	6.91	Mlig455_029349	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.166 Region-enriched R6: 1.879/0.03191 Region-enriched R3: 1.645/0.04948		0.964	-	-	-	-	-	0.964	Mlig455_029349 {REF} {Length: 1031} {RNA1509_36117} {RNA1310_28672, RNA1509_36117} {RNA1509_36117, RNA815_21001.1}
5.	MligTC455_54271	87	1.82	Mlig455_067612	Neo: - Age: -	UNCX	0.957	-	-	-	-	0.957	-	Mlig455_067612 {REF} {Length: 2927} {Pfam: Homeodomain [PF00046.31, score=81.2]} {Human: ENSG00000164853, UNCX, UNC homeobox, [RH, Score=171, Expect=1e-47]} {Mouse: ENSMUSG00000029546, Uncx, UNC homeobox, [RH, Score=171, Expect=5e-48]} {Dmel: FBgn0024184, unc-4, [RH, Score=167, Expect=4e-46]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [RH, Score=147, Expect=1e-41]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [RH, Score=174, Expect=2e-50]} {RNA1509_31519} {RNA1310_108854} {RNA815_4812}
6.	MligTC455_19366	2365	49.28	Mlig455_029830	Neo: - Age: - Region-enriched R3: 1.992/0.00057 Region-enriched R5: 1.418/0.01296	PANK3	0.953	-	-	-	-	-	0.953	Mlig455_029830 {REF} {Length: 1495} {Pfam: Fumble [PF03630.16, score=108.9]} {Human: ENSG00000120137, PANK3, pantothenate kinase 3, [Score=57.0, Expect=2e-08]; ENSG00000152782, PANK1, pantothenate kinase 1, [Score=56.6, Expect=3e-08]; ENSG00000125779, PANK2, pantothenate kinase 2, [Score=55.1, Expect=5e-08]} {Mouse: ENSMUSG00000018846, Pank3, pantothenate kinase 3, [Score=56.6, Expect=2e-08]; ENSMUSG00000033610, Pank1, pantothenate kinase 1, [Score=56.2, Expect=2e-08]; ENSMUSG00000037514, Pank2, pantothenate kinase 2, [Score=55.8, Expect=4e-08]} {Dmel: FBgn0011205, fbl, fumble, [Score=55.1, Expect=5e-08]} {Smed: dd_Smed_v6_994_0_1, dd_Smed_v6_994_0_1, [RH, Score=227, Expect=2e-71]} {RNA1509_1801} {RNA1310_24657, RNA1509_1801} {RNA1509_1801, RNA815_10326}
7.	MligTC455_17327	681	14.19	Mlig455_013023, Mlig455_013072	Neo: Int S/G2/M Age: -	MLYCD	0.95	-	-	-	-	-	0.950	Mlig455_013023 {REF} {Length: 2671} {Pfam: Malonyl-CoA decarboxylase C-terminal domain [PF05292.13, score=268.5]; Malonyl-CoA decarboxylase N-terminal domain [PF17408.4, score=44.4]} {Human: ENSG00000103150, MLYCD, malonyl-CoA decarboxylase, [RH, Score=313, Expect=3e-102]} {Mouse: ENSMUSG00000074064, Mlycd, malonyl-CoA decarboxylase, [RH, Score=317, Expect=9e-104]} {Celegans: WBGene00009439, mlcd-1, MaLonyl CoA Decarboxylase, [RH, Score=223, Expect=3e-68]} {Smed: dd_Smed_v6_6439_0_1, dd_Smed_v6_6439_0_1, [RH, Score=302, Expect=7e-98]} {RNA1509_10767} {RNA1310_19073} {RNA815_8103.1} Mlig455_013072 {REF} {Length: 3395} {Pfam: Malonyl-CoA decarboxylase C-terminal domain [PF05292.13, score=268.5]; Malonyl-CoA decarboxylase N-terminal domain [PF17408.4, score=44.8]} {Human: ENSG00000103150, MLYCD, malonyl-CoA decarboxylase, [RH, Score=313, Expect=3e-102]} {Mouse: ENSMUSG00000074064, Mlycd, malonyl-CoA decarboxylase, [RH, Score=317, Expect=1e-103]} {Celegans: WBGene00009439, mlcd-1, MaLonyl CoA Decarboxylase, [RH, Score=223, Expect=4e-68]} {Smed: dd_Smed_v6_6439_0_1, dd_Smed_v6_6439_0_1, [RH, Score=302, Expect=6e-98]} {RNA1509_10767, RNA1509_24671} {RNA1310_19073, RNA1509_10767, RNA1509_24671} {RNA1509_10767, RNA1509_24671, RNA815_8103.1}

Berezikov Lab - 2020-2021 © ERIBA