TomoSeq data search

Data search

Results for MligTC455_37080

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37080	5293	110.26	Mlig455_030963	Neo: - Age: -		Mlig455_030963 {REF} {Length: 8356} {Pfam: CUB domain [PF00431.22, score=125.0]; Protein of unknown function (DUF3662) [PF12401.10, score=22.2]} {RNA1509_20085, RNA1509_2306, RNA1509_25548, RNA1509_27088, RNA1509_51670} {RNA1310_578, RNA1509_20085, RNA1509_2306, RNA1509_27088, RNA1509_51670} {RNA1509_20085, RNA1509_2306, RNA1509_27088, RNA1509_51670, RNA815_71.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_37080

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.096	6.846	0.01579	0.35466
RegionR2	-0.712	6.846	0.13601	0.45788
RegionR3	0.611	6.846	0.10576	0.56913
RegionR4	1.221	6.846	0.00926	0.05763
RegionR5	0.487	6.846	0.20601	0.49970
RegionR6	0.376	6.846	0.33217	0.92010
RegionR7	0.257	6.846	0.54649	1.00000
RegionR8	-0.144	6.846	0.79125	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.689	6.846	0.00417	0.32424
RegenerationR2	0.191	6.846	0.68781	0.95191
RegenerationR3	0.443	6.846	0.35982	0.77652
RegenerationR4	0.511	6.846	0.29908	0.74119
RegenerationR5	0.825	6.846	0.08543	0.45062
RegenerationR6	0.846	6.846	0.08062	0.35462
RegenerationBL	0.255	6.846	0.55691	0.91249
RegenerationTP	1.509	6.846	0.00157	0.06236

Genes with expression patterns similar to MligTC455_37080

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37080	5293	110.26	Mlig455_030963	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_030963 {REF} {Length: 8356} {Pfam: CUB domain [PF00431.22, score=125.0]; Protein of unknown function (DUF3662) [PF12401.10, score=22.2]} {RNA1509_20085, RNA1509_2306, RNA1509_25548, RNA1509_27088, RNA1509_51670} {RNA1310_578, RNA1509_20085, RNA1509_2306, RNA1509_27088, RNA1509_51670} {RNA1509_20085, RNA1509_2306, RNA1509_27088, RNA1509_51670, RNA815_71.1}
2.	MligTC455_37078	16885	351.77	Mlig455_017358, Mlig455_017442	Neo: - Age: logFC(26M/2M)=0.256		3.394	-	-	0.728	0.889	0.812	0.965	Mlig455_017358 {REF} {Length: 8726} {Pfam: CUB domain [PF00431.22, score=140.1]; Protein of unknown function (DUF3662) [PF12401.10, score=25.1]} {RNA1509_25548, RNA1509_37609, RNA1509_39646} {RNA1310_327.1, RNA1509_37609, RNA1509_39646} {RNA1509_37609, RNA1509_39646, RNA815_71.1} Mlig455_017442 {REF} {Length: 8929} {Pfam: CUB domain [PF00431.22, score=140.3]; Protein of unknown function (DUF3662) [PF12401.10, score=26.1]} {RNA1509_20840, RNA1509_25548, RNA1509_35912} {RNA1310_327.1, RNA1509_20840, RNA1509_35912} {RNA1509_20840, RNA1509_35912, RNA815_71.1}
3.	MligTC455_17454	76	1.58	Mlig455_045213	Neo: - Age: - Region-enriched R4: 4.793/0.00597	VWA5A	0.964	-	-	-	0.964	-	-	Mlig455_045213 {REF} {Length: 3119} {Pfam: von Willebrand factor type A domain [PF13768.8, score=83.5]; Vault protein inter-alpha-trypsin domain [PF08487.12, score=70.2]; von Willebrand factor type A domain [PF00092.30, score=55.7]; von Willebrand factor type A domain [PF13519.8, score=50.2]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=48.9]; VWA domain containing CoxE-like protein [PF05762.16, score=20.4]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=225, Expect=6e-62]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [RH, Score=246, Expect=2e-69]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=230, Expect=3e-64]} {RNA1509_37149} {RNA1310_4644.1} {RNA815_27803}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_37080

5293

110.26

Mlig455_030963

Neo: -

Age: -

1.000

MligTC455_37078

16885

351.77

Mlig455_017358, Mlig455_017442

Neo: -

Age: logFC(26M/2M)=0.256

3.394

0.728

0.889

0.812

0.965

Mlig455_017358 {REF} {Length: 8726} {Pfam: CUB domain [PF00431.22, score=140.1]; Protein of unknown function (DUF3662) [PF12401.10, score=25.1]} {RNA1509_25548, RNA1509_37609, RNA1509_39646} {RNA1310_327.1, RNA1509_37609, RNA1509_39646} {RNA1509_37609, RNA1509_39646, RNA815_71.1}

Mlig455_017442 {REF} {Length: 8929} {Pfam: CUB domain [PF00431.22, score=140.3]; Protein of unknown function (DUF3662) [PF12401.10, score=26.1]} {RNA1509_20840, RNA1509_25548, RNA1509_35912} {RNA1310_327.1, RNA1509_20840, RNA1509_35912} {RNA1509_20840, RNA1509_35912, RNA815_71.1}

MligTC455_17454

1.58

Mlig455_045213

Neo: -

Age: -

Region-enriched R4: 4.793/0.00597

VWA5A

0.964

Mlig455_045213 {REF} {Length: 3119} {Pfam: von Willebrand factor type A domain [PF13768.8, score=83.5]; Vault protein inter-alpha-trypsin domain [PF08487.12, score=70.2]; von Willebrand factor type A domain [PF00092.30, score=55.7]; von Willebrand factor type A domain [PF13519.8, score=50.2]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=48.9]; VWA domain containing CoxE-like protein [PF05762.16, score=20.4]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=225, Expect=6e-62]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [RH, Score=246, Expect=2e-69]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=230, Expect=3e-64]} {RNA1509_37149} {RNA1310_4644.1} {RNA815_27803}