M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_37121

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37121 45 0.94 Mlig455_015375

Neo: -

Age: Up-Down-Up

 Mlig455_015375 {REF} {Length: 10600} {Pfam: Dynamin family [PF00350.25, score=30.0]} {Celegans: WBGene00015646, mlt-10, [Score=180, Expect=1e-46]} {RNA1509_20670} {RNA1310_2372} {RNA815_26487}

Cumulative graph for MligTC455_37121

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.309 1.325 0.57223 1.00000
RegionR2 1.542 1.325 0.25261 0.63202
RegionR3 0.355 1.325 0.73238 1.00000
RegionR4 0.106 1.325 0.83943 1.00000
RegionR5 -0.714 1.325 0.97957 1.00000
RegionR6 0.198 1.325 0.80492 1.00000
RegionR7 0.484 1.325 0.72837 1.00000
RegionR8 1.338 1.325 0.44849 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.128 1.325 0.99999 1.00000
RegenerationR2 -0.044 1.325 0.96057 1.00000
RegenerationR3 -1.669 1.325 0.14809 0.57606
RegenerationR4 0.956 1.325 0.35985 0.78706
RegenerationR5 1.433 1.325 0.12584 0.52933
RegenerationR6 -0.538 1.325 0.65778 0.90210
RegenerationBL -3.931 1.325 0.13440 0.43674
RegenerationTP -1.132 1.325 0.50537 0.90382


Genes with expression patterns similar to MligTC455_37121

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37121 45 0.94 Mlig455_015375

Neo: -

Age: Up-Down-Up

 4 - - 1.000 1.000 1.000 1.000 Mlig455_015375 {REF} {Length: 10600} {Pfam: Dynamin family [PF00350.25, score=30.0]} {Celegans: WBGene00015646, mlt-10, [Score=180, Expect=1e-46]} {RNA1509_20670} {RNA1310_2372} {RNA815_26487}
2. MligTC455_23507 28 0.58 Mlig455_038046

Neo: -

Age: -

 RELA 1.738 - - - 0.951 - 0.787 Mlig455_038046 {REF} {Length: 1306} {TRANSSPLICED} {Pfam: Rel homology DNA-binding domain [PF00554.24, score=51.7]} {Human: ENSG00000173039, RELA, RELA proto-oncogene, NF-kB subunit, [RH, Score=53.9, Expect=3e-08]} {Mouse: ENSMUSG00000020275, Rel, reticuloendotheliosis oncogene, [Score=50.1, Expect=3e-06]; ENSMUSG00000024927, Rela, v-rel reticuloendotheliosis viral oncogene homolog A (avian), [Score=49.3, Expect=4e-06]} {RNA1509_13487, RNA1509_59965} {RNA1310_15249.2, RNA1509_13487} {RNA1509_13487, RNA815_11165.2}
3. MligTC455_04804 7 0.14 Mlig455_054726

Neo: -

Age: -

 0.991 - - - - 0.991 - Mlig455_054726 {REF} {Length: 134} {NoTransDecoderORF} {RNA1509_30911} {RNA1310_29851.1}
4. MligTC455_53720 144 2.99 Mlig455_028516

Neo: -

Age: -

Region-enriched R2: 4.205/0.01762

 CTBP2 0.984 - - - 0.984 - - Mlig455_028516 {REF} {Length: 3357} {TRANSSPLICED} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=112.7]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=67.2]; THAP domain [PF05485.14, score=38.8]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=22.2]} {Human: ENSG00000175029, CTBP2, C-terminal binding protein 2, [Score=370, Expect=3e-115]; ENSG00000159692, CTBP1, C-terminal binding protein 1, [Score=360, Expect=1e-117]} {Mouse: ENSMUSG00000030970, Ctbp2, C-terminal binding protein 2, [Score=372, Expect=5e-116]; ENSMUSG00000037373, Ctbp1, C-terminal binding protein 1, [Score=362, Expect=8e-119]} {Dmel: FBgn0020496, CtBP, C-terminal Binding Protein, [Score=354, Expect=1e-116]} {Celegans: WBGene00006424, ctbp-1, C-terminal-binding protein 1, [Score=475, Expect=8e-159]} {Smed: dd_Smed_v6_1063_0_1, dd_Smed_v6_1063_0_1, [Score=354, Expect=3e-115]} {RNA1310_37204} {RNA815_48484}
5. MligTC455_10790 80 1.67 Mlig455_004150

Neo: -

Age: -

 0.978 - - - 0.978 - - Mlig455_004150 {REF} {Length: 1396} {NoTransDecoderORF} {RNA1310_73702} {RNA815_48954}
6. MligTC455_17441 203 4.23 Mlig455_043730, Mlig455_043821, Mlig455_047428

Neo: Germline

Age: -

Region-enriched R5: 3.909/0.00034
Region-enriched R4: 3.477/0.00542

 RPA1 0.977 - - - - 0.977 -

Mlig455_043730 {REF} {Length: 2711} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=131.0]; Replication protein A OB domain [PF16900.7, score=73.8]; OB-fold nucleic acid binding domain [PF01336.27, score=51.7]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=32.8]; Cell division control protein 24, OB domain 3 [PF17244.4, score=27.3]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=291, Expect=3e-89]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=276, Expect=1e-83]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=249, Expect=7e-74]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=270, Expect=1e-82]} {RNA1509_50209} {RNA1310_12384} {RNA815_25755}

Mlig455_043821 {REF} {Length: 2624} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=131.0]; Replication protein A OB domain [PF16900.7, score=73.8]; OB-fold nucleic acid binding domain [PF01336.27, score=52.1]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=32.4]; Cell division control protein 24, OB domain 3 [PF17244.4, score=27.3]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=292, Expect=7e-90]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=277, Expect=4e-84]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=248, Expect=9e-74]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=273, Expect=1e-83]} {RNA1509_50209} {RNA1310_12384} {RNA815_25755}

Mlig455_047428 {REF} {Length: 2693} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=131.0]; Replication protein A OB domain [PF16900.7, score=74.5]; OB-fold nucleic acid binding domain [PF01336.27, score=51.3]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=32.8]; Cell division control protein 24, OB domain 3 [PF17244.4, score=27.3]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=291, Expect=2e-89]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=276, Expect=7e-84]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=250, Expect=3e-74]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=269, Expect=3e-82]} {RNA1509_50209} {RNA1310_12384} {RNA815_25755}
7. MligTC455_22486 20 0.41 Mlig455_030248

Neo: -

Age: -

 0.972 - - - 0.972 - - Mlig455_030248 {REF} {Length: 318} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_34178} {RNA815_36932.1}
8. MligTC455_32996 35 0.73 Mlig455_039006

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_039006 {REF} {Length: 1342} {RNA1509_43135} {RNA1310_50569} {RNA815_3411}
9. MligTC455_38278 50 1.04 Mlig455_014927

Neo: -

Age: -

 NOL4L 0.969 - - - 0.969 - - Mlig455_014927 {REF} {Length: 2062} {Human: ENSG00000197183, NOL4L, nucleolar protein 4 like, [RH, Score=149, Expect=3e-39]} {Mouse: ENSMUSG00000061411, Nol4l, nucleolar protein 4-like, [RH, Score=149, Expect=4e-39]} {Dmel: FBgn0283651, CG46301, [RH, Score=146, Expect=3e-37]} {Smed: dd_Smed_v6_27580_0_1, dd_Smed_v6_27580_0_1, [RH, Score=83.2, Expect=5e-17]} {RNA1310_111241} {RNA815_49535}
10. MligTC455_12231 98 2.04 Mlig455_036385

Neo: -

Age: -

 0.966 - - - 0.966 - - Mlig455_036385 {REF} {Length: 831} {NoTransDecoderORF} {RNA1509_32623} {RNA1310_46301} {RNA815_22921}
11. MligTC455_03110 58 1.2 Mlig455_069260

Neo: -

Age: -

 GABBR2 0.964 - - - 0.964 - - Mlig455_069260 {REF} {Length: 6190} {TRANSSPLICED} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=150.8]; Receptor family ligand binding region [PF01094.30, score=121.6]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=259, Expect=1e-73]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=255, Expect=2e-72]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=238, Expect=4e-66]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=223, Expect=8e-62]} {Smed: dd_Smed_v6_59890_0_1, dd_Smed_v6_59890_0_1, [Score=112, Expect=1e-28]} {RNA1509_59815} {RNA1310_19655} {RNA815_19308}
12. MligTC455_36776 282 5.87 Mlig455_065722

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.615

Region-enriched R6: 6.284/0.00000
Region-enriched R2: 5.336/0.00441

 0.962 - - - 0.962 - - Mlig455_065722 {REF} {Length: 907} {RNA1509_48740} {RNA1310_54738.2, RNA1509_48740} {RNA1509_48740, RNA815_27047}
13. MligTC455_43261 41 0.86 Mlig455_065982

Neo: -

Age: -

 0.962 - - - 0.962 - - Mlig455_065982 {REF} {Length: 581} {RNA1509_55651} {RNA1310_59019} {RNA815_42240}
14. MligTC455_33705 35 0.73 Mlig455_063348

Neo: -

Age: Up-Down-Down

 COL9A2 0.96 - - - 0.960 - - Mlig455_063348 {REF} {Length: 7183} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=100.7]; Myotubularin protein [PF12335.10, score=23.7]} {Human: ENSG00000049089, COL9A2, collagen type IX alpha 2 chain, [Score=112, Expect=8e-25]; ENSG00000204262, COL5A2, collagen type V alpha 2 chain, [Score=111, Expect=4e-24]} {Mouse: ENSMUSG00000026042, Col5a2, collagen, type V, alpha 2, [Score=119, Expect=1e-26]; ENSMUSG00000045672, Col27a1, collagen, type XXVII, alpha 1, [Score=117, Expect=3e-26]; ENSMUSG00000026147, Col9a1, collagen, type IX, alpha 1, [Score=116, Expect=4e-26]; ENSMUSG00000028626, Col9a2, collagen, type IX, alpha 2, [Score=115, Expect=5e-26]} {Dmel: FBgn0016075, vkg, viking, [Score=106, Expect=7e-23]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=80.9, Expect=4e-15]} {Smed: dd_Smed_v6_832_0_1, dd_Smed_v6_832_0_1, [Score=140, Expect=1e-33]} {RNA1310_28728} {RNA815_22052}
15. MligTC455_25113 762 15.87 Mlig455_020768

Neo: -

Age: Down-Up-Down

Region-enriched R7: 2.653/0.00004
Region-enriched R2: 2.201/0.02449

 0.959 - - - 0.959 - - Mlig455_020768 {REF} {Length: 810} {Celegans: WBGene00003748, nlp-10, Neuropeptide-Like Protein, [Score=46.2, Expect=1e-06]} {RNA1509_36958} {RNA1310_50245} {RNA815_48543}
16. MligTC455_32179 7 0.15 Mlig455_022383

Neo: -

Age: -

 KREMEN2 0.959 - - - 0.959 - - Mlig455_022383 {REF} {Length: 1111} {Pfam: WSC domain [PF01822.21, score=44.5]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=51.2, Expect=5e-07]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=49.3, Expect=2e-06]} {RNA1310_89673} {RNA815_64813}
17. MligTC455_16358 1175 24.47 Mlig455_039878

Neo: -

Age: -

Region-specific R2: 4.659

Region-enriched R2: 4.310/0.00000

 0.958 - - - 0.958 - - Mlig455_039878 {REF} {Length: 1188} {RNA1509_60020} {RNA1310_35099.1, RNA1509_60020} {RNA1509_60020, RNA815_1356.1}
18. MligTC455_30568 16 0.33 Mlig455_049799

Neo: -

Age: -

 0.958 - - - 0.958 - - Mlig455_049799 {REF} {Length: 212} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11298} {RNA1310_50420} {RNA815_19826}
19. MligTC455_48656 24 0.5 Mlig455_039647

Neo: -

Age: -

 0.957 - - - 0.957 - - Mlig455_039647 {REF} {Length: 1715} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=42.7]} {RNA1310_48037} {RNA815_27969}
20. MligTC455_20154 22 0.45 Mlig455_002425

Neo: -

Age: -

 OTOP2 0.956 - - - 0.956 - - Mlig455_002425 {REF} {Length: 2659} {Pfam: Otopetrin [PF03189.15, score=233.1]} {Human: ENSG00000183034, OTOP2, otopetrin 2, [Score=55.1, Expect=3e-07]} {Mouse: ENSMUSG00000050201, Otop2, otopetrin 2, [Score=62.4, Expect=1e-09]} {Dmel: FBgn0259150, CG42265, [Score=197, Expect=2e-52]} {Celegans: WBGene00015035, otpl-1, OToPetrin-Like, [Score=117, Expect=6e-27]} {Smed: dd_Smed_v6_13612_0_4, dd_Smed_v6_13612_0_4, [Score=296, Expect=3e-91]} {RNA1310_52344} {RNA815_48323}
21. MligTC455_12494 7 0.15 Mlig455_008233

Neo: -

Age: -

 0.955 - - - 0.955 - - Mlig455_008233 {REF} {Length: 1962} {Pfam: F5/8 type C domain [PF00754.27, score=27.4]} {Smed: dd_Smed_v6_46759_0_1, dd_Smed_v6_46759_0_1, [Score=44.7, Expect=6e-06]} {RNA1310_28170} {RNA815_37289}
22. MligTC455_40405 83 1.72 Mlig455_015672

Neo: -

Age: -

Region-enriched R2: 4.956/0.00100

 CHRNA9 0.955 - - - 0.955 - - Mlig455_015672 {REF} {Length: 3935} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=152.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=111.8]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=204, Expect=4e-59]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=202, Expect=2e-58]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=201, Expect=5e-58]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=200, Expect=2e-57]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=199, Expect=5e-57]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=199, Expect=5e-57]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=199, Expect=1e-56]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=197, Expect=3e-55]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=196, Expect=1e-55]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [Score=194, Expect=5e-55]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=209, Expect=8e-61]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=205, Expect=4e-59]; ENSMUSG00000035594, Chrna5, cholinergic receptor, nicotinic, alpha polypeptide 5, [Score=201, Expect=3e-58]} {Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=201, Expect=4e-58]} {Celegans: WBGene00000050, acr-11, AcetylCholine Receptor, [Score=191, Expect=8e-55]} {Smed: dd_Smed_v6_9503_0_1, dd_Smed_v6_9503_0_1, [RH, Score=446, Expect=1e-151]} {RNA1509_18288} {RNA1310_3728} {RNA815_3826.1}
23. MligTC455_10899 46 0.95 Mlig455_013784, Mlig455_013915

Neo: -

Age: -

 0.954 - - - 0.954 - -

Mlig455_013784 {REF} {Length: 1362} {Pfam: Glycine rich protein [PF12810.9, score=20.8]} {RNA1509_28715} {RNA1310_91773} {RNA815_35307}

Mlig455_013915 {REF} {Length: 1516} {Pfam: Glycine rich protein [PF12810.9, score=20.3]} {RNA1509_28715} {RNA1310_91773} {RNA815_35307}
24. MligTC455_13846 32 0.67 Mlig455_013761

Neo: -

Age: -

 CALM2 0.954 - - - 0.954 - - Mlig455_013761 {REF} {Length: 941} {Pfam: EF hand [PF00036.34, score=94.2]; EF-hand domain [PF13405.8, score=86.1]; EF-hand domain pair [PF13499.8, score=83.6]; EF hand [PF13202.8, score=77.1]; EF-hand domain pair [PF13833.8, score=42.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=31.3]; EF-hand domain [PF14658.8, score=23.8]; Ca2+ insensitive EF hand [PF08726.12, score=21.5]; Caleosin related protein [PF05042.15, score=21.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=60.1, Expect=1e-11]; ENSG00000160014, CALM3, calmodulin 3, [Score=60.1, Expect=1e-11]; ENSG00000198668, CALM1, calmodulin 1, [Score=60.1, Expect=1e-11]; ENSG00000178363, CALML3, calmodulin like 3, [Score=59.3, Expect=2e-11]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=60.5, Expect=1e-11]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=60.1, Expect=8e-12]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=60.1, Expect=8e-12]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=59.7, Expect=1e-11]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=60.8, Expect=3e-12]} {Celegans: WBGene00019352, K03A1.4, [Score=70.9, Expect=8e-16]} {Smed: dd_Smed_v6_15455_0_1, dd_Smed_v6_15455_0_1, [RH, Score=97.4, Expect=1e-26]} {RNA1310_47452} {RNA815_31258}
25. MligTC455_17177 103 2.15 Mlig455_048992, Mlig455_049009

Neo: -

Age: Down-Down-Up

 0.953 - - - 0.953 - -

Mlig455_048992 {REF} {Length: 1836} {RNA1509_44702} {RNA1310_14743, RNA1509_44702} {RNA1509_44702, RNA815_20669.1}

Mlig455_049009 {REF} {Length: 1823} {RNA1509_44702} {RNA1310_14743} {RNA815_20669.1}
26. MligTC455_41138 172 3.59 Mlig455_056871

Neo: -

Age: -

 GNG7 0.953 - - - 0.953 - - Mlig455_056871 {REF} {Length: 584} {Pfam: GGL domain [PF00631.24, score=50.2]} {Human: ENSG00000176533, GNG7, G protein subunit gamma 7, [Score=50.4, Expect=3e-09]} {Mouse: ENSMUSG00000036402, Gng12, guanine nucleotide binding protein (G protein), gamma 12, [Score=48.9, Expect=9e-09]; ENSMUSG00000032766, Gng11, guanine nucleotide binding protein (G protein), gamma 11, [Score=47.8, Expect=3e-08]} {Dmel: FBgn0263029, CG43324, [Score=53.9, Expect=7e-11]} {Celegans: WBGene00001681, gpc-1, Guanine nucleotide-binding protein subunit gamma, [Score=51.2, Expect=5e-10]} {Smed: dd_Smed_v6_1237_0_2, dd_Smed_v6_1237_0_2, [Score=102, Expect=4e-30]} {RNA1509_49315} {RNA1310_60760.1} {RNA815_37265}
27. MligTC455_48517 682 14.21 Mlig455_004431

Neo: -

Age: -

Region-enriched R6: 4.694/0.00066
Region-enriched R2: 4.683/0.00294

 0.953 - - - 0.953 - - Mlig455_004431 {REF} {Length: 3101} {Smed: dd_Smed_v6_19517_0_1, dd_Smed_v6_19517_0_1, [RH, Score=112, Expect=3e-25]} {RNA1509_50708} {RNA1310_13399} {RNA815_33428}
28. MligTC455_48518 1365 28.44 Mlig455_004430, Mlig455_004445

Neo: -

Age: -

Region-enriched R6: 4.827/0.00024
Region-enriched R2: 4.789/0.00134
Region-enriched R7: 3.445/0.01502

 0.953 - - - 0.953 - -

Mlig455_004430 {REF} {Length: 3275} {Pfam: GDNF/GAS1 domain [PF02351.18, score=23.6]} {Smed: dd_Smed_v6_19517_0_1, dd_Smed_v6_19517_0_1, [RH, Score=113, Expect=2e-25]} {RNA1509_50708} {RNA1310_13399, RNA1509_50708} {RNA1509_50708, RNA815_36630}

Mlig455_004445 {REF} {Length: 796} {RNA1509_12695} {RNA1310_66704} {RNA815_33428}
29. MligTC455_12847 25 0.51 Mlig455_049599

Neo: -

Age: -

 0.952 - - - 0.952 - - Mlig455_049599 {REF} {Length: 1963} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=67.4]; Olfactory receptor [PF13853.8, score=24.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=22.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.1]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [RH, Score=91.7, Expect=1e-19]} {Smed: dd_Smed_v6_35525_0_1, dd_Smed_v6_35525_0_1, [Score=144, Expect=1e-38]} {RNA1310_85894} {RNA815_45174}
30. MligTC455_31172 195 4.06 Mlig455_028354

Neo: -

Age: -

Region-enriched R5: 4.005/0.04475

 0.952 - - - 0.952 - - Mlig455_028354 {REF} {Length: 2036} {RNA1310_45498} {RNA815_15412}
31. MligTC455_40084 79 1.65 Mlig455_046693

Neo: Int S/G2/M

Age: -

 SNAPC3 0.952 - - - 0.952 - - Mlig455_046693 {REF} {Length: 3322} {TRANSSPLICED} {Pfam: snRNA-activating protein complex (SNAPc), subunit 3 [PF12251.10, score=123.0]} {Human: ENSG00000164975, SNAPC3, small nuclear RNA activating complex polypeptide 3, [RH, Score=84.7, Expect=3e-17]} {Mouse: ENSMUSG00000028483, Snapc3, small nuclear RNA activating complex, polypeptide 3, [RH, Score=89.7, Expect=4e-19]} {Celegans: WBGene00021667, snpc-3.2, SNAPc (Small Nuclear RNA Activating Complex) homolog, [RH, Score=70.9, Expect=4e-13]} {Smed: dd_Smed_v6_9421_0_1, dd_Smed_v6_9421_0_1, [RH, Score=120, Expect=2e-30]} {RNA1509_41696} {RNA1310_22781.3, RNA1509_41696} {RNA1509_41696, RNA815_25555}
32. MligTC455_12671 38 0.79 Mlig455_038144, Mlig455_039808

Neo: -

Age: -

 0.951 - - - 0.951 - -

Mlig455_038144 {REF} {Length: 650} {RNA1310_68328} {RNA815_32749}

Mlig455_039808 {REF} {Length: 815} {RNA1310_68328} {RNA815_32749}
33. MligTC455_13243 15 0.32 Mlig455_056688

Neo: -

Age: -

 0.951 - - - 0.951 - - Mlig455_056688 {REF} {Length: 422} {NoTransDecoderORF} {RNA1310_142782}
34. MligTC455_42484 246 5.12 Mlig455_046416

Neo: -

Age: Down-Up-Down

Region-specific R2: 4.313

Region-enriched R2: 2.983/0.00930

 0.951 - - - 0.951 - - Mlig455_046416 {REF} {Length: 1006} {RNA1310_40237.1} {RNA815_18246}
35. MligTC455_19310 70 1.45 Mlig455_003091

Neo: -

Age: -

Region-enriched R2: 3.267/0.02767

 SPRED2 0.95 - - - 0.950 - - Mlig455_003091 {REF} {Length: 1347} {Pfam: Sprouty protein (Spry) [PF05210.15, score=59.9]} {Human: ENSG00000198369, SPRED2, sprouty related EVH1 domain containing 2, [RH, Score=70.1, Expect=8e-13]} {Mouse: ENSMUSG00000045671, Spred2, sprouty-related, EVH1 domain containing 2, [RH, Score=70.1, Expect=5e-13]} {Dmel: FBgn0020767, Spred, Sprouty-related protein with EVH-1 domain, [Score=54.3, Expect=6e-08]} {Smed: dd_Smed_v6_14816_0_1, dd_Smed_v6_14816_0_1, [RH, Score=59.3, Expect=6e-11]} {RNA1310_54905} {RNA815_26736}
36. MligTC455_24568 25 0.51 Mlig455_038127

Neo: -

Age: Down-Up-Down

 CACNA2D2 0.95 - - - 0.950 - - Mlig455_038127 {REF} {Length: 4202} {Pfam: von Willebrand factor type A domain [PF13519.8, score=41.5]; von Willebrand factor type A domain [PF00092.30, score=36.2]; von Willebrand factor type A domain [PF13768.8, score=30.8]} {Human: ENSG00000007402, CACNA2D2, calcium voltage-gated channel auxiliary subunit alpha2delta 2, [Score=82.8, Expect=2e-16]; ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=79.3, Expect=3e-15]; ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [Score=79.0, Expect=4e-15]} {Mouse: ENSMUSG00000010066, Cacna2d2, calcium channel, voltage-dependent, alpha 2/delta subunit 2, [Score=82.4, Expect=2e-16]; ENSMUSG00000040118, Cacna2d1, calcium channel, voltage-dependent, alpha2/delta subunit 1, [Score=79.3, Expect=3e-15]} {Celegans: WBGene00007041, tag-180, [Score=62.0, Expect=4e-10]} {Smed: dd_Smed_v6_19048_0_1, dd_Smed_v6_19048_0_1, [Score=430, Expect=2e-140]} {RNA1509_28096} {RNA1310_2030} {RNA815_1872}
37. MligTC455_37431 35 0.74 Mlig455_021017

Neo: -

Age: -

 TMEM268 0.95 - - - 0.950 - - Mlig455_021017 {REF} {Length: 1973} {Pfam: Domain of unknown function (DUF4481) [PF14800.8, score=60.3]} {Human: ENSG00000157693, TMEM268, transmembrane protein 268, [Score=52.8, Expect=6e-07]} {Mouse: ENSMUSG00000045917, Tmem268, transmembrane protein 268, [Score=58.2, Expect=8e-09]} {Dmel: FBgn0028527, CG18507, [Score=55.1, Expect=8e-08]} {RNA1310_62734} {RNA815_60695}
38. MligTC455_48713 380 7.92 Mlig455_009259, Mlig455_009268

Neo: -

Age: Down-Up-Down

Region-specific R2: 6.962

Region-enriched R2: 4.845/0.00046
Region-enriched R6: 3.343/0.03198

 0.95 - - - 0.950 - -

Mlig455_009259 {REF} {Length: 654} {RNA1509_35038} {RNA1310_72135} {RNA815_37404}

Mlig455_009268 {REF} {Length: 546} {RNA1509_35038} {RNA1310_72135, RNA1509_35038} {RNA1509_35038, RNA815_37404}
39. MligTC455_53788 175 3.65 Mlig455_046938

Neo: -

Age: Up-Down-Down

 PATJ 0.95 - - - 0.950 - - Mlig455_046938 {REF} {Length: 2899} {Pfam: PDZ domain [PF00595.26, score=86.8]; PDZ domain [PF17820.3, score=53.6]; PDZ domain [PF13180.8, score=51.0]; Family of unknown function (DUF6288) [PF19805.1, score=24.2]} {Human: ENSG00000132849, PATJ, PATJ, crumbs cell polarity complex component, [Score=80.5, Expect=1e-16]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [Score=74.7, Expect=7e-15]} {Dmel: FBgn0087007, bbg, big bang, [Score=58.2, Expect=2e-09]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=56.6, Expect=5e-09]} {Smed: dd_Smed_v6_854_0_3, dd_Smed_v6_854_0_3, [Score=65.1, Expect=7e-12]} {RNA1509_37898} {RNA1310_15726, RNA1509_37898} {RNA1509_37898, RNA815_2967}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA