TomoSeq data search

Data search

Results for MligTC455_37146

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37146

27

0.56

Mlig455_032970

Neo: -

Age: -

Mlig455_032970 {REF} {Length: 4818} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=39.4]} {Celegans: WBGene00020012, R11G1.6, [RH, Score=68.9, Expect=1e-11]} {Smed: dd_Smed_v6_6358_0_1, dd_Smed_v6_6358_0_1, [Score=54.3, Expect=3e-07]} {RNA1509_40904} {RNA1310_7092} {RNA815_1981.1}

Cumulative graph for MligTC455_37146

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.237	0.966	0.99976	1.00000
RegionR2	1.738	0.966	0.99987	1.00000
RegionR3	2.216	0.966	0.99996	1.00000
RegionR4	-0.238	0.966	0.99977	1.00000
RegionR5	1.676	0.966	0.99988	1.00000
RegionR6	1.072	0.966	0.99994	1.00000
RegionR7	0.235	0.966	0.99997	1.00000
RegionR8	-2.463	0.966	0.99989	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.053	0.966	0.99998	1.00000
RegenerationR2	3.764	0.966	0.04917	0.36628
RegenerationR3	2.75	0.966	0.10745	0.51772
RegenerationR4	1.436	0.966	0.28350	0.72873
RegenerationR5	1.227	0.966	0.29553	0.72282
RegenerationR6	3.507	0.966	0.08631	0.36756
RegenerationBL	0.062	0.966	0.99993	1.00000
RegenerationTP	3.767	0.966	0.28433	0.73106

Genes with expression patterns similar to MligTC455_37146

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37146	27	0.56	Mlig455_032970	Neo: - Age: -		2	-	-	-	1.000	1.000	-	Mlig455_032970 {REF} {Length: 4818} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=39.4]} {Celegans: WBGene00020012, R11G1.6, [RH, Score=68.9, Expect=1e-11]} {Smed: dd_Smed_v6_6358_0_1, dd_Smed_v6_6358_0_1, [Score=54.3, Expect=3e-07]} {RNA1509_40904} {RNA1310_7092} {RNA815_1981.1}
2.	MligTC455_02079	56	1.17	Mlig455_057407	Neo: - Age: Down-Up-Down		1.713	-	-	-	0.950	0.763	-	Mlig455_057407 {REF} {Length: 1093} {RNA1310_38425.2} {RNA815_41742}
3.	MligTC455_30830	115	2.39	Mlig455_028763	Neo: - Age: logFC(26M/2M)=-0.683	THAP1	0.971	-	-	-	-	0.971	-	Mlig455_028763 {REF} {Length: 7616} {Pfam: THAP domain [PF05485.14, score=65.4]; Transposase protein [PF12017.10, score=48.2]} {Human: ENSG00000131931, THAP1, THAP domain containing 1, [RH, Score=79.7, Expect=3e-16]} {Mouse: ENSMUSG00000037214, Thap1, THAP domain containing, apoptosis associated protein 1, [RH, Score=79.7, Expect=2e-16]} {Dmel: FBgn0032730, CG10431, [Score=53.9, Expect=5e-07]} {RNA1509_56939} {RNA1310_2079.1} {RNA815_2452.1}
4.	MligTC455_20742	748	15.59	Mlig455_056524	Neo: - Age: logFC(26M/2M)=0.319	RPS24	0.968	-	-	-	-	0.968	-	Mlig455_056524 {REF} {Length: 2157} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=71.0]; Ribosomal protein S24e [PF01282.21, score=67.4]; Ankyrin repeats (many copies) [PF13637.8, score=55.2]; Ankyrin repeat [PF00023.32, score=46.3]; Ankyrin repeat [PF13606.8, score=41.7]; Ankyrin repeats (many copies) [PF13857.8, score=33.3]} {Human: ENSG00000138326, RPS24, ribosomal protein S24, [RH, Score=90.9, Expect=2e-19]} {Mouse: ENSMUSG00000025290, Rps24, ribosomal protein S24, [RH, Score=88.6, Expect=2e-20]} {Dmel: FBgn0261596, RpS24, Ribosomal protein S24, [RH, Score=98.6, Expect=4e-24]} {Celegans: WBGene00004493, rps-24, Ribosomal Protein, Small subunit, [RH, Score=112, Expect=3e-29]} {Smed: dd_Smed_v6_164_0_1, dd_Smed_v6_164_0_1, [RH, Score=100, Expect=4e-25]} {RNA1509_18314} {RNA1310_15458, RNA1509_18314} {RNA1509_18314, RNA815_6508}
5.	MligTC455_13404	345	7.2	Mlig455_010191, Mlig455_058689	Neo: - Age: -		0.966	-	-	-	-	0.966	-	Mlig455_010191 {REF} {Length: 3071} {NoTransDecoderORF} Mlig455_058689 {REF} {Length: 1552} {NoTransDecoderORF}
6.	MligTC455_25876	24	0.49	Mlig455_021691	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_021691 {REF} {Length: 911} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_22299} {RNA815_15623}
7.	MligTC455_00704	59	1.23	Mlig455_053188	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_053188 {REF} {Length: 905} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_99471} {RNA815_41194.1}
8.	MligTC455_28685	23	0.47	Mlig455_052645	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_052645 {REF} {Length: 3989} {Pfam: Integrase core domain [PF00665.28, score=39.0]} {Smed: dd_Smed_v6_11155_0_6, dd_Smed_v6_11155_0_6, [Score=55.5, Expect=1e-09]} {RNA1509_27921} {RNA1310_246.1} {RNA815_29.1}
9.	MligTC455_37959	177	3.69	Mlig455_038764	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.399	SCNN1B	0.962	-	-	-	-	0.962	-	Mlig455_038764 {REF} {Length: 3158} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=192.0]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=49.7, Expect=1e-05]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=68.9, Expect=7e-12]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=57.4, Expect=2e-08]} {Smed: dd_Smed_v6_26855_0_1, dd_Smed_v6_26855_0_1, [Score=168, Expect=4e-45]} {RNA1509_35658, RNA1509_58401} {RNA1310_10317.1, RNA1509_35658, RNA1509_58401} {RNA1509_35658, RNA1509_58401, RNA815_3305}
10.	MligTC455_31983	36	0.75	Mlig455_033325	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_033325 {REF} {Length: 1717} {Pfam: GIY-YIG catalytic domain [PF01541.26, score=19.7]} {RNA1509_7715} {RNA1310_26667} {RNA815_43514}
11.	MligTC455_31058	105	2.19	Mlig455_055504	Neo: - Age: Down-Up-Down Region-enriched R2: 4.938/0.00376		0.959	-	-	-	-	0.959	-	Mlig455_055504 {REF} {Length: 2826} {RNA1509_37722} {RNA1310_40193} {RNA815_29874}
12.	MligTC455_16107	23	0.48	Mlig455_061835	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_061835 {REF} {Length: 921} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_15891} {RNA815_15623}
13.	MligTC455_17436	22	0.47	Mlig455_033214	Neo: - Age: - Regeneration-enriched R4: 7.606 Regeneration-enriched R5: 7.009 Regeneration-enriched R2: 5.797		0.956	-	-	-	-	0.956	-	Mlig455_033214 {REF} {Length: 2213} {RNA1509_57489} {RNA1310_102144} {RNA815_16672}
14.	MligTC455_27525	53	1.1	Mlig455_066504	Neo: - Age: logFC(26M/2M)=-0.624	ABCG2	0.956	-	-	-	-	0.956	-	Mlig455_066504 {REF} {Length: 3214} {Pfam: ABC-2 type transporter [PF19055.2, score=40.2]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=64.3, Expect=2e-12]} {Mouse: ENSMUSG00000040505, Abcg5, ATP binding cassette subfamily G member 5, [Score=60.8, Expect=2e-11]} {Dmel: FBgn0020445, E23, Early gene at 23, [Score=80.9, Expect=2e-18]} {Celegans: WBGene00006522, abcx-1, ABC transporter, eXtended, [Score=61.2, Expect=1e-11]} {Smed: dd_Smed_v6_4142_0_1, dd_Smed_v6_4142_0_1, [Score=67.4, Expect=5e-14]} {RNA1509_52359} {RNA1310_6299.1} {RNA815_1994.1}
15.	MligTC455_28801	55	1.14	Mlig455_041745	Neo: - Age: -	RTL1	0.954	-	-	-	-	0.954	-	Mlig455_041745 {REF} {Length: 7682} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=98.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=98.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=91.2]; Aspartyl protease [PF09668.12, score=25.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.4]; Aspartyl protease [PF13650.8, score=22.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=107, Expect=6e-23]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=90.9, Expect=7e-18]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=90.9, Expect=7e-18]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=323, Expect=5e-98]} {RNA1509_53012} {RNA1310_832} {RNA815_19380}
16.	MligTC455_27063	74	1.54	Mlig455_019209	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_019209 {REF} {Length: 481} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}

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