TomoSeq data search

Data search

Results for MligTC455_37202

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37202	787	16.39	Mlig455_049928	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.322	SLK	Mlig455_049928 {REF} {Length: 4631} {Pfam: Protein kinase domain [PF00069.27, score=115.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=112.1]; Ankyrin repeats (3 copies) [PF12796.9, score=82.6]; Caspase domain [PF00656.24, score=82.3]; Ankyrin repeat [PF13606.8, score=41.5]; Ankyrin repeats (many copies) [PF13857.8, score=39.8]; Ankyrin repeats (many copies) [PF13637.8, score=35.4]; Ankyrin repeat [PF00023.32, score=31.5]} {Human: ENSG00000065613, SLK, STE20 like kinase, [Score=100, Expect=1e-20]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=99.0, Expect=9e-21]; ENSG00000114904, NEK4, NIMA related kinase 4, [Score=97.4, Expect=7e-20]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=96.7, Expect=2e-19]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=102, Expect=5e-22]; ENSMUSG00000025060, Slk, STE20-like kinase, [Score=99.8, Expect=1e-20]} {Dmel: FBgn0024329, Mekk1, [Score=104, Expect=3e-22]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=87.0, Expect=3e-17]} {Smed: dd_Smed_v6_9041_0_1, dd_Smed_v6_9041_0_1, [Score=97.8, Expect=6e-22]} {RNA1509_12294, RNA1509_13647} {RNA1310_2150, RNA1509_12294, RNA1509_13647} {RNA1509_12294, RNA1509_13647, RNA815_2075.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37202

787

16.39

Mlig455_049928

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.322

SLK

Mlig455_049928 {REF} {Length: 4631} {Pfam: Protein kinase domain [PF00069.27, score=115.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=112.1]; Ankyrin repeats (3 copies) [PF12796.9, score=82.6]; Caspase domain [PF00656.24, score=82.3]; Ankyrin repeat [PF13606.8, score=41.5]; Ankyrin repeats (many copies) [PF13857.8, score=39.8]; Ankyrin repeats (many copies) [PF13637.8, score=35.4]; Ankyrin repeat [PF00023.32, score=31.5]} {Human: ENSG00000065613, SLK, STE20 like kinase, [Score=100, Expect=1e-20]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=99.0, Expect=9e-21]; ENSG00000114904, NEK4, NIMA related kinase 4, [Score=97.4, Expect=7e-20]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=96.7, Expect=2e-19]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=102, Expect=5e-22]; ENSMUSG00000025060, Slk, STE20-like kinase, [Score=99.8, Expect=1e-20]} {Dmel: FBgn0024329, Mekk1, [Score=104, Expect=3e-22]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=87.0, Expect=3e-17]} {Smed: dd_Smed_v6_9041_0_1, dd_Smed_v6_9041_0_1, [Score=97.8, Expect=6e-22]} {RNA1509_12294, RNA1509_13647} {RNA1310_2150, RNA1509_12294, RNA1509_13647} {RNA1509_12294, RNA1509_13647, RNA815_2075.1}

Cumulative graph for MligTC455_37202

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.445	4.351	0.67088	1.00000
RegionR2	0.102	4.351	0.79060	1.00000
RegionR3	0.292	4.351	0.34719	0.88218
RegionR4	0.088	4.351	0.80803	1.00000
RegionR5	-0.627	4.351	0.05285	0.19526
RegionR6	-0.274	4.351	0.42797	0.99267
RegionR7	0.488	4.351	0.24753	0.87328
RegionR8	0.376	4.351	0.51224	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.444	4.351	0.06447	0.74158
RegenerationR2	0.095	4.351	0.73605	0.96834
RegenerationR3	0.03	4.351	0.92653	1.00000
RegenerationR4	0.033	4.351	0.92089	1.00000
RegenerationR5	0.703	4.351	0.02644	0.27684
RegenerationR6	0.18	4.351	0.60588	0.87165
RegenerationBL	-0.186	4.351	0.65296	0.98939
RegenerationTP	-0.623	4.351	0.19693	0.63657

Genes with expression patterns similar to MligTC455_37202

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37202	787	16.39	Mlig455_049928	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.322	SLK	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_049928 {REF} {Length: 4631} {Pfam: Protein kinase domain [PF00069.27, score=115.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=112.1]; Ankyrin repeats (3 copies) [PF12796.9, score=82.6]; Caspase domain [PF00656.24, score=82.3]; Ankyrin repeat [PF13606.8, score=41.5]; Ankyrin repeats (many copies) [PF13857.8, score=39.8]; Ankyrin repeats (many copies) [PF13637.8, score=35.4]; Ankyrin repeat [PF00023.32, score=31.5]} {Human: ENSG00000065613, SLK, STE20 like kinase, [Score=100, Expect=1e-20]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=99.0, Expect=9e-21]; ENSG00000114904, NEK4, NIMA related kinase 4, [Score=97.4, Expect=7e-20]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=96.7, Expect=2e-19]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=102, Expect=5e-22]; ENSMUSG00000025060, Slk, STE20-like kinase, [Score=99.8, Expect=1e-20]} {Dmel: FBgn0024329, Mekk1, [Score=104, Expect=3e-22]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=87.0, Expect=3e-17]} {Smed: dd_Smed_v6_9041_0_1, dd_Smed_v6_9041_0_1, [Score=97.8, Expect=6e-22]} {RNA1509_12294, RNA1509_13647} {RNA1310_2150, RNA1509_12294, RNA1509_13647} {RNA1509_12294, RNA1509_13647, RNA815_2075.1}
2.	MligTC455_23615	1709	35.6	Mlig455_005653	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.262	C5orf49	1.845	0.891	-	-	0.954	-	-	Mlig455_005653 {REF} {Length: 827} {Pfam: Domain of unknown function (DUF4541) [PF15074.8, score=117.9]} {Human: ENSG00000215217, C5orf49, chromosome 5 open reading frame 49, [RH, Score=97.4, Expect=4e-26]} {Mouse: ENSMUSG00000021534, 1700001L19Rik, RIKEN cDNA 1700001L19 gene, [RH, Score=103, Expect=3e-28]} {Smed: dd_Smed_v6_6211_0_1, dd_Smed_v6_6211_0_1, [RH, Score=137, Expect=2e-42]} {RNA1509_17241, RNA1509_42216} {RNA1310_45402, RNA1509_17241, RNA1509_42216} {RNA1509_17241, RNA1509_42216, RNA815_23943.1}
3.	MligTC455_50525	649	13.51	Mlig455_064810	Neo: - Age: - Regeneration-downregulated BL: -2.392 Regeneration-depleted BL: -2.392		1.707	-	-	-	0.954	-	0.753	Mlig455_064810 {REF} {Length: 3120} {Pfam: KH domain [PF00013.31, score=21.6]} {RNA1509_42290, RNA1509_8706} {RNA1310_15125, RNA1509_8706} {RNA1509_8706, RNA815_5998}
4.	MligTC455_50524	2187	45.56	Mlig455_033433	Neo: - Age: -		1.689	-	-	-	0.960	-	0.729	Mlig455_033433 {REF} {Length: 2629} {TRANSSPLICED} {RNA1509_42290} {RNA1310_15125} {RNA815_19799}
5.	MligTC455_44049	683	14.24	Mlig455_056686	Neo: - Age: logFC(26M/2M)=0.180 Region-enriched R4: 1.577/0.00572		0.981	-	-	-	0.981	-	-	Mlig455_056686 {REF} {Length: 2385} {Pfam: Multi-glycosylated core protein 24 (MGC-24), sialomucin [PF05283.13, score=33.2]} {Dmel: FBgn0045823, vsg, visgun, [Score=47.0, Expect=2e-06]} {Smed: dd_Smed_v6_828_0_1, dd_Smed_v6_828_0_1, [Score=49.7, Expect=8e-09]} {RNA1509_14879, RNA1509_9381} {RNA1310_34958.1, RNA1509_9381} {RNA1509_9381, RNA815_6770.2}
6.	MligTC455_35422	838	17.46	Mlig455_043711	Neo: - Age: Down-Down-Up	COG2	0.953	-	-	-	-	0.953	-	Mlig455_043711 {REF} {Length: 7789} {TRANSSPLICED} {Pfam: COG (conserved oligomeric Golgi) complex component, COG2 [PF06148.13, score=104.7]; Domain of unknown function (DUF3510) [PF12022.10, score=95.0]; TRAF-type zinc finger [PF02176.20, score=30.2]} {Human: ENSG00000135775, COG2, component of oligomeric golgi complex 2, [Score=284, Expect=3e-81]} {Mouse: ENSMUSG00000031979, Cog2, component of oligomeric golgi complex 2, [Score=283, Expect=6e-81]} {Dmel: FBgn0026634, ldlCp, ldlCp-related protein, [Score=202, Expect=8e-54]} {Celegans: WBGene00000585, cogc-2, Conserved oligomeric Golgi complex subunit 2, [Score=134, Expect=6e-32]} {Smed: dd_Smed_v6_5210_0_1, dd_Smed_v6_5210_0_1, [Score=284, Expect=1e-81]} {RNA1509_12449, RNA1509_21794} {RNA1310_5891, RNA1509_21794} {RNA1509_21794, RNA815_1472}