TomoSeq data search

Data search

Results for MligTC455_37218

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37218	226	4.71	Mlig455_070873	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.537 Regeneration-enriched BL: 7.599 Regeneration-enriched R3: 7.479 Regeneration-enriched R6: 7.148 Regeneration-enriched R2: 7.054 Regeneration-enriched TP: 7.038 Regeneration-enriched R5: 4.849 Regeneration-enriched R4: 4.120		Mlig455_070873 {REF} {Length: 1950} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=40.6]} {RNA1509_5149} {RNA1310_40010} {RNA815_30093}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_37218

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.338	2.647	0.99978	1.00000
RegionR2	-0.292	2.647	0.99961	1.00000
RegionR3	0.261	2.647	0.52651	1.00000
RegionR4	2.473	2.647	0.03900	0.16275
RegionR5	1.183	2.647	0.18076	0.45773
RegionR6	0.201	2.647	0.57198	1.00000
RegionR7	-2.366	2.647	0.99971	1.00000
RegionR8	1.879	2.647	0.30020	0.93092

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	8.174	2.647	0.15968	0.90339
RegenerationR2	7.054	2.647	0.00000	0.00002
RegenerationR3	7.479	2.647	0.00000	0.00000
RegenerationR4	4.12	2.647	0.00007	0.00514
RegenerationR5	4.849	2.647	0.00000	0.00010
RegenerationR6	7.148	2.647	0.00000	0.00000
RegenerationBL	7.599	2.647	0.00000	0.00000
RegenerationTP	7.038	2.647	0.00000	0.00064

Genes with expression patterns similar to MligTC455_37218

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37218	226	4.71	Mlig455_070873	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.537 Regeneration-enriched BL: 7.599 Regeneration-enriched R3: 7.479 Regeneration-enriched R6: 7.148 Regeneration-enriched R2: 7.054 Regeneration-enriched TP: 7.038 Regeneration-enriched R5: 4.849 Regeneration-enriched R4: 4.120		5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_070873 {REF} {Length: 1950} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=40.6]} {RNA1509_5149} {RNA1310_40010} {RNA815_30093}
2.	MligTC455_22826	607	12.65	Mlig455_006871	Neo: - Age: -	ATG4C	0.956	-	-	-	0.956	-	-	Mlig455_006871 {REF} {Length: 5184} {TRANSSPLICED} {Pfam: Peptidase family C54 [PF03416.21, score=188.3]; Ribosomal protein L6 [PF00347.25, score=41.0]} {Human: ENSG00000125703, ATG4C, autophagy related 4C cysteine peptidase, [Score=142, Expect=2e-36]} {Mouse: ENSMUSG00000028550, Atg4c, autophagy related 4C, cysteine peptidase, [Score=137, Expect=1e-34]; ENSMUSG00000002820, Atg4d, autophagy related 4D, cysteine peptidase, [Score=137, Expect=1e-34]} {Dmel: FBgn0038325, Atg4b, Autophagy-related 4b, [Score=134, Expect=9e-33]} {Celegans: WBGene00013595, atg-4.1, Cysteine protease, [Score=127, Expect=1e-31]} {Smed: dd_Smed_v6_10824_0_1, dd_Smed_v6_10824_0_1, [RH, Score=162, Expect=1e-43]} {RNA1509_29780} {RNA1310_15687.1} {RNA815_37674}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_37218

226

4.71

Mlig455_070873

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.537

1.000

Mlig455_070873 {REF} {Length: 1950} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=40.6]} {RNA1509_5149} {RNA1310_40010} {RNA815_30093}

MligTC455_22826

607

12.65

Mlig455_006871

Neo: -

Age: -

ATG4C

0.956

Mlig455_006871 {REF} {Length: 5184} {TRANSSPLICED} {Pfam: Peptidase family C54 [PF03416.21, score=188.3]; Ribosomal protein L6 [PF00347.25, score=41.0]} {Human: ENSG00000125703, ATG4C, autophagy related 4C cysteine peptidase, [Score=142, Expect=2e-36]} {Mouse: ENSMUSG00000028550, Atg4c, autophagy related 4C, cysteine peptidase, [Score=137, Expect=1e-34]; ENSMUSG00000002820, Atg4d, autophagy related 4D, cysteine peptidase, [Score=137, Expect=1e-34]} {Dmel: FBgn0038325, Atg4b, Autophagy-related 4b, [Score=134, Expect=9e-33]} {Celegans: WBGene00013595, atg-4.1, Cysteine protease, [Score=127, Expect=1e-31]} {Smed: dd_Smed_v6_10824_0_1, dd_Smed_v6_10824_0_1, [RH, Score=162, Expect=1e-43]} {RNA1509_29780} {RNA1310_15687.1} {RNA815_37674}