TomoSeq data search

Data search

Results for MligTC455_37243

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37243

9318

194.13

Mlig455_046221

Neo: -

Age: -

DNAJA1

Mlig455_046221 {REF} {Length: 1972} {TRANSSPLICED} {Pfam: DnaJ C terminal domain [PF01556.20, score=140.1]; DnaJ domain [PF00226.33, score=91.2]; DnaJ central domain [PF00684.21, score=61.6]} {Human: ENSG00000086061, DNAJA1, DnaJ heat shock protein family (Hsp40) member A1, [RH, Score=499, Expect=1e-176]; ENSG00000140403, DNAJA4, DnaJ heat shock protein family (Hsp40) member A4, [RH, Score=486, Expect=3e-171]} {Mouse: ENSMUSG00000028410, Dnaja1, DnaJ heat shock protein family (Hsp40) member A1, [RH, Score=498, Expect=2e-176]; ENSMUSG00000032285, Dnaja4, DnaJ heat shock protein family (Hsp40) member A4, [RH, Score=488, Expect=1e-172]} {Dmel: FBgn0038145, Droj2, DnaJ-like-2, [RH, Score=434, Expect=6e-151]} {Celegans: WBGene00001030, dnj-12, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=337, Expect=2e-113]} {Smed: dd_Smed_v6_147_0_1, dd_Smed_v6_147_0_1, [RH, Score=519, Expect=0.0]} {RNA1509_7283} {RNA1310_14190.1} {RNA815_5674.1}

Cumulative graph for MligTC455_37243

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.164	7.632	0.61643	1.00000
RegionR2	-0.243	7.632	0.21999	0.58838
RegionR3	0.141	7.632	0.39335	0.92334
RegionR4	0.343	7.632	0.07512	0.25381
RegionR5	-0.183	7.632	0.26178	0.58322
RegionR6	0.042	7.632	0.80266	1.00000
RegionR7	-0.018	7.632	0.92280	1.00000
RegionR8	0.082	7.632	0.71270	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.061	7.632	0.88497	1.00000
RegenerationR2	0.012	7.632	0.95421	1.00000
RegenerationR3	-0.096	7.632	0.64316	0.92607
RegenerationR4	-0.08	7.632	0.70935	0.95722
RegenerationR5	0.261	7.632	0.19828	0.63052
RegenerationR6	0.147	7.632	0.48191	0.79300
RegenerationBL	0.059	7.632	0.76824	1.00000
RegenerationTP	-0.077	7.632	0.72769	1.00000

Genes with expression patterns similar to MligTC455_37243

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37243	9318	194.13	Mlig455_046221	Neo: - Age: -	DNAJA1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_046221 {REF} {Length: 1972} {TRANSSPLICED} {Pfam: DnaJ C terminal domain [PF01556.20, score=140.1]; DnaJ domain [PF00226.33, score=91.2]; DnaJ central domain [PF00684.21, score=61.6]} {Human: ENSG00000086061, DNAJA1, DnaJ heat shock protein family (Hsp40) member A1, [RH, Score=499, Expect=1e-176]; ENSG00000140403, DNAJA4, DnaJ heat shock protein family (Hsp40) member A4, [RH, Score=486, Expect=3e-171]} {Mouse: ENSMUSG00000028410, Dnaja1, DnaJ heat shock protein family (Hsp40) member A1, [RH, Score=498, Expect=2e-176]; ENSMUSG00000032285, Dnaja4, DnaJ heat shock protein family (Hsp40) member A4, [RH, Score=488, Expect=1e-172]} {Dmel: FBgn0038145, Droj2, DnaJ-like-2, [RH, Score=434, Expect=6e-151]} {Celegans: WBGene00001030, dnj-12, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=337, Expect=2e-113]} {Smed: dd_Smed_v6_147_0_1, dd_Smed_v6_147_0_1, [RH, Score=519, Expect=0.0]} {RNA1509_7283} {RNA1310_14190.1} {RNA815_5674.1}
2.	MligTC455_49023	593	12.35	Mlig455_008741	Neo: - Age: -		0.965	-	-	0.965	-	-	-	Mlig455_008741 {REF} {Length: 1695} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=24.8]; Lipopolysaccharide assembly protein A domain [PF06305.13, score=18.8]} {Smed: dd_Smed_v6_2114_0_1, dd_Smed_v6_2114_0_1, [RH, Score=129, Expect=3e-35]} {RNA1509_42918} {RNA1310_17906} {RNA815_7308.1}
3.	MligTC455_42463	367	7.65	Mlig455_069188	Neo: - Age: - Region-enriched R7: 1.879/0.00540 Region-enriched R2: 1.715/0.02219	GNB4	0.962	-	-	0.962	-	-	-	Mlig455_069188 {REF} {Length: 2146} {Pfam: WD domain, G-beta repeat [PF00400.34, score=116.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.0]} {Human: ENSG00000114450, GNB4, G protein subunit beta 4, [Score=348, Expect=2e-118]; ENSG00000172354, GNB2, G protein subunit beta 2, [Score=345, Expect=4e-117]; ENSG00000078369, GNB1, G protein subunit beta 1, [Score=344, Expect=9e-117]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=336, Expect=1e-113]} {Mouse: ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=346, Expect=6e-117]; ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=344, Expect=6e-117]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=337, Expect=3e-114]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=332, Expect=5e-112]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=356, Expect=1e-121]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=355, Expect=2e-121]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=375, Expect=4e-129]} {RNA1509_5337} {RNA1310_9924.1} {RNA815_3556}
4.	MligTC455_25037	222	4.63	Mlig455_013437	Neo: - Age: -	TRIM23	0.957	-	-	0.957	-	-	-	Mlig455_013437 {REF} {Length: 2464} {Pfam: ADP-ribosylation factor family [PF00025.23, score=203.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=46.8]; Ras family [PF00071.24, score=42.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=30.4]; G-protein alpha subunit [PF00503.22, score=27.3]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.9]} {Human: ENSG00000113595, TRIM23, tripartite motif containing 23, [Score=338, Expect=1e-110]} {Mouse: ENSMUSG00000021712, Trim23, tripartite motif-containing 23, [Score=339, Expect=3e-111]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=185, Expect=9e-57]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=187, Expect=7e-58]} {Smed: dd_Smed_v6_641_0_1, dd_Smed_v6_641_0_1, [Score=182, Expect=5e-56]} {RNA1509_18100} {RNA1310_14941} {RNA815_9120}
5.	MligTC455_06262	478	9.95	Mlig455_003942	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_003942 {REF} {Length: 1205} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF08241.14, score=26.0]} {Smed: dd_Smed_v6_3714_0_1, dd_Smed_v6_3714_0_1, [Score=76.3, Expect=2e-16]} {RNA1509_23823} {RNA1310_16396.1} {RNA815_10422}
6.	MligTC455_20646	427	8.89	Mlig455_014838	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_014838 {REF} {Length: 1709} {TRANSSPLICED} {Pfam: Innexin [PF00876.20, score=320.6]} {Dmel: FBgn0085387, shakB, shaking B, [Score=109, Expect=2e-26]} {Celegans: WBGene00006747, unc-7, Innexin unc-7, [Score=239, Expect=5e-75]} {Smed: dd_Smed_v6_6114_0_3, dd_Smed_v6_6114_0_3, [Score=254, Expect=1e-79]} {RNA1509_42593} {RNA1310_19028, RNA1509_42593} {RNA1509_42593, RNA815_11478}
7.	MligTC455_29146	251	5.22	Mlig455_018255, Mlig455_018296	Neo: - Age: Down-Up-Down		0.955	-	-	0.955	-	-	-	Mlig455_018255 {REF} {Length: 1629} {Pfam: Cupin superfamily (DUF985) [PF06172.13, score=105.0]} {RNA1509_57035} {RNA1310_34956} {RNA815_14348} Mlig455_018296 {REF} {Length: 1223} {NoTransDecoderORF} {RNA1509_57035} {RNA1310_34956} {RNA815_14348}
8.	MligTC455_43957	514	10.7	Mlig455_068253	Neo: - Age: Down-Down-Up Region-enriched R4: 2.100/0.03935	EIF2S1	0.953	-	-	0.953	-	-	-	Mlig455_068253 {REF} {Length: 1149} {TRANSSPLICED} {Pfam: Eukaryotic translation initiation factor 2 alpha subunit [PF07541.14, score=116.9]; S1 RNA binding domain [PF00575.25, score=54.7]} {Human: ENSG00000134001, EIF2S1, eukaryotic translation initiation factor 2 subunit alpha, [RH, Score=396, Expect=1e-138]} {Mouse: ENSMUSG00000021116, Eif2s1, eukaryotic translation initiation factor 2, subunit 1 alpha, [RH, Score=397, Expect=6e-139]} {Dmel: FBgn0261609, eIF2alpha, eukaryotic translation initiation factor 2 subunit alpha, [RH, Score=366, Expect=9e-127]} {Celegans: WBGene00021351, eif-2alpha, Eukaryotic Initiation Factor, [RH, Score=352, Expect=3e-121]} {Smed: dd_Smed_v6_6582_0_1, dd_Smed_v6_6582_0_1, [RH, Score=362, Expect=6e-126]} {RNA1509_647} {RNA1310_25632} {RNA815_12567}
9.	MligTC455_48981	141	2.95	Mlig455_038703	Neo: - Age: -	MIOS	0.953	-	-	0.953	-	-	-	Mlig455_038703 {REF} {Length: 3741} {TRANSSPLICED} {Pfam: Zinc-ribbon like family [PF17034.7, score=62.2]; Zinc-ribbon, C4HC2 type [PF17120.7, score=21.6]; RING-H2 zinc finger domain [PF12678.9, score=19.0]} {Human: ENSG00000164654, MIOS, meiosis regulator for oocyte development, [RH, Score=233, Expect=8e-64]} {Mouse: ENSMUSG00000042447, Mios, meiosis regulator for oocyte development, [RH, Score=235, Expect=1e-64]} {Dmel: FBgn0031399, mio, missing oocyte, [RH, Score=149, Expect=1e-36]} {Celegans: WBGene00018193, F39C12.1, [RH, Score=64.3, Expect=4e-10]} {Smed: dd_Smed_v6_10107_0_1, dd_Smed_v6_10107_0_1, [RH, Score=169, Expect=5e-43]} {RNA1509_7657} {RNA1310_4772, RNA1509_7657} {RNA1509_7657, RNA815_5355}
10.	MligTC455_49024	510	10.63	Mlig455_035896	Neo: - Age: Up-Down-Down		0.952	-	-	0.952	-	-	-	Mlig455_035896 {REF} {Length: 1719} {Pfam: Lipopolysaccharide assembly protein A domain [PF06305.13, score=20.5]} {RNA1509_42918} {RNA1310_17906} {RNA815_7308.1}
11.	MligTC455_43378	309	6.45	Mlig455_010890	Neo: - Age: Up-Down-Up	ECI1	0.951	-	-	0.951	-	-	-	Mlig455_010890 {REF} {Length: 1717} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=129.8]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=45.4]} {Human: ENSG00000167969, ECI1, enoyl-CoA delta isomerase 1, [RH, Score=156, Expect=1e-45]} {Mouse: ENSMUSG00000024132, Eci1, enoyl-Coenzyme A delta isomerase 1, [RH, Score=170, Expect=3e-51]} {Dmel: FBgn0032160, CG4598, [RH, Score=165, Expect=2e-49]} {RNA1509_16471, RNA1509_18454, RNA1509_59982} {RNA1310_26151, RNA1509_16471, RNA1509_18454, RNA1509_59982} {RNA1509_16471, RNA1509_18454, RNA1509_59982, RNA815_13315}
12.	MligTC455_37901	335	6.98	Mlig455_056248	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.829		0.95	-	-	0.950	-	-	-	Mlig455_056248 {REF} {Length: 2926} {RNA1509_51793, RNA1509_6108} {RNA1310_13444.1, RNA1509_51793, RNA1509_6108} {RNA1509_51793, RNA1509_6108, RNA815_4706.1}

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