TomoSeq data search

Data search

Results for MligTC455_37248

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37248	35	0.72	Mlig455_034408	Neo: - Age: -		Mlig455_034408 {REF} {Length: 2719} {RNA1310_3551.1} {RNA815_10618.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_37248

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.397	1.055	0.99996	1.00000
RegionR2	0.146	1.055	0.78134	1.00000
RegionR3	1.117	1.055	0.50643	0.99704
RegionR4	2.418	1.055	0.15050	0.40056
RegionR5	1.535	1.055	0.33250	0.67809
RegionR6	0.335	1.055	0.74491	1.00000
RegionR7	0.101	1.055	0.81564	1.00000
RegionR8	-2.254	1.055	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.409	1.055	1.00000	1.00000
RegenerationR2	0.48	1.055	0.72769	0.96484
RegenerationR3	-0.343	1.055	0.82624	0.98976
RegenerationR4	-0.951	1.055	0.51074	0.87473
RegenerationR5	-1.632	1.055	0.27483	0.70442
RegenerationR6	1.079	1.055	0.48180	0.79300
RegenerationBL	-2.602	1.055	1.00000	1.00000
RegenerationTP	1.226	1.055	0.61399	0.96913

Genes with expression patterns similar to MligTC455_37248

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37248	35	0.72	Mlig455_034408	Neo: - Age: -		2	-	-	-	1.000	1.000	-	Mlig455_034408 {REF} {Length: 2719} {RNA1310_3551.1} {RNA815_10618.1}
2.	MligTC455_36037	40	0.84	Mlig455_024374, Mlig455_024489	Neo: - Age: - Region-enriched R4: 4.705/0.03795	MS4A18	0.969	-	-	-	0.969	-	-	Mlig455_024374 {REF} {Length: 2944} {Pfam: Herpes virus major outer envelope glycoprotein (BLLF1) [PF05109.15, score=39.9]; Nuclear/hormone receptor activator site AF-1 [PF11825.10, score=24.7]; Bacterial protein of unknown function (DUF948) [PF06103.13, score=23.7]; Lipoprotein leucine-zipper [PF04728.15, score=21.6]} {Human: ENSG00000214782, MS4A18, membrane spanning 4-domains A18, [Score=54.3, Expect=2e-08]} {RNA1509_12101} {RNA1310_12480} {RNA815_56304.1} Mlig455_024489 {REF} {Length: 3270} {Pfam: Herpes virus major outer envelope glycoprotein (BLLF1) [PF05109.15, score=22.0]} {RNA1509_12101} {RNA1310_52198.1} {RNA815_56304.1}
3.	MligTC455_47706	143	2.98	Mlig455_005317	Neo: - Age: logFC(26M/2M)=-0.441	VEPH1	0.951	-	-	-	0.951	-	-	Mlig455_005317 {REF} {Length: 5218} {TRANSSPLICED} {Human: ENSG00000197415, VEPH1, ventricular zone expressed PH domain containing 1, [RH, Score=105, Expect=2e-22]} {Mouse: ENSMUSG00000027831, Veph1, ventricular zone expressed PH domain-containing 1, [RH, Score=97.4, Expect=3e-20]} {Dmel: FBgn0023001, melt, melted, [RH, Score=97.8, Expect=2e-20]} {Celegans: WBGene00019615, K10B4.3, Protein melted homolog, [RH, Score=101, Expect=1e-21]} {RNA1509_27116} {RNA1310_3335.2} {RNA815_7388}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_37248

0.72

Mlig455_034408

Neo: -

Age: -

1.000

Mlig455_034408 {REF} {Length: 2719} {RNA1310_3551.1} {RNA815_10618.1}

MligTC455_36037

0.84

Mlig455_024374, Mlig455_024489

Neo: -

Age: -

Region-enriched R4: 4.705/0.03795

MS4A18

0.969

Mlig455_024374 {REF} {Length: 2944} {Pfam: Herpes virus major outer envelope glycoprotein (BLLF1) [PF05109.15, score=39.9]; Nuclear/hormone receptor activator site AF-1 [PF11825.10, score=24.7]; Bacterial protein of unknown function (DUF948) [PF06103.13, score=23.7]; Lipoprotein leucine-zipper [PF04728.15, score=21.6]} {Human: ENSG00000214782, MS4A18, membrane spanning 4-domains A18, [Score=54.3, Expect=2e-08]} {RNA1509_12101} {RNA1310_12480} {RNA815_56304.1}

Mlig455_024489 {REF} {Length: 3270} {Pfam: Herpes virus major outer envelope glycoprotein (BLLF1) [PF05109.15, score=22.0]} {RNA1509_12101} {RNA1310_52198.1} {RNA815_56304.1}

MligTC455_47706

143

2.98

Mlig455_005317

Neo: -

Age: logFC(26M/2M)=-0.441

VEPH1

0.951

Mlig455_005317 {REF} {Length: 5218} {TRANSSPLICED} {Human: ENSG00000197415, VEPH1, ventricular zone expressed PH domain containing 1, [RH, Score=105, Expect=2e-22]} {Mouse: ENSMUSG00000027831, Veph1, ventricular zone expressed PH domain-containing 1, [RH, Score=97.4, Expect=3e-20]} {Dmel: FBgn0023001, melt, melted, [RH, Score=97.8, Expect=2e-20]} {Celegans: WBGene00019615, K10B4.3, Protein melted homolog, [RH, Score=101, Expect=1e-21]} {RNA1509_27116} {RNA1310_3335.2} {RNA815_7388}