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Results for MligTC455_37263

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37263 888 18.50 Mlig455_020635, Mlig455_048834

Neo: -

Age: -

 PRPF39

Mlig455_020635 {REF} {Length: 2986} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13428.8, score=38.3]; Suppressor of forked protein (Suf) [PF05843.16, score=26.1]} {Human: ENSG00000185246, PRPF39, pre-mRNA processing factor 39, [RH, Score=419, Expect=5e-137]} {Mouse: ENSMUSG00000035597, Prpf39, pre-mRNA processing factor 39, [RH, Score=412, Expect=2e-134]} {Dmel: FBgn0039600, CG1646, [RH, Score=226, Expect=2e-62]} {Celegans: WBGene00017768, F25B4.5, [RH, Score=268, Expect=2e-79]} {RNA1509_16477} {RNA1310_3194} {RNA815_948.1}

Mlig455_048834 {REF} {Length: 3689} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13428.8, score=40.8]; Suppressor of forked protein (Suf) [PF05843.16, score=26.8]} {Human: ENSG00000185246, PRPF39, pre-mRNA processing factor 39, [RH, Score=420, Expect=2e-137]} {Mouse: ENSMUSG00000035597, Prpf39, pre-mRNA processing factor 39, [RH, Score=414, Expect=3e-135]} {Dmel: FBgn0039600, CG1646, [RH, Score=224, Expect=8e-62]} {Celegans: WBGene00017768, F25B4.5, [RH, Score=270, Expect=4e-80]} {RNA1509_16477, RNA1509_19574} {RNA1310_3194, RNA1509_16477, RNA1509_19574} {RNA1509_16477, RNA1509_19574, RNA815_948.1}

Cumulative graph for MligTC455_37263

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.994 4.497 0.12538 0.72017
RegionR2 0.441 4.497 0.38387 0.77878
RegionR3 0.12 4.497 0.76911 1.00000
RegionR4 0.078 4.497 0.86029 1.00000
RegionR5 -0.333 4.497 0.41440 0.77385
RegionR6 -0.456 4.497 0.30781 0.89851
RegionR7 0.72 4.497 0.12982 0.67740
RegionR8 1.424 4.497 0.01203 0.21021

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.026 4.497 0.99104 1.00000
RegenerationR2 -0.068 4.497 0.87355 1.00000
RegenerationR3 0.065 4.497 0.88968 1.00000
RegenerationR4 -0.212 4.497 0.63709 0.92597
RegenerationR5 0.063 4.497 0.89026 1.00000
RegenerationR6 0.907 4.497 0.05259 0.28718
RegenerationBL 0.112 4.497 0.81896 1.00000
RegenerationTP -1.845 4.497 0.00175 0.06617


Genes with expression patterns similar to MligTC455_37263

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37263 888 18.5 Mlig455_020635, Mlig455_048834

Neo: -

Age: -

 PRPF39 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_020635 {REF} {Length: 2986} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13428.8, score=38.3]; Suppressor of forked protein (Suf) [PF05843.16, score=26.1]} {Human: ENSG00000185246, PRPF39, pre-mRNA processing factor 39, [RH, Score=419, Expect=5e-137]} {Mouse: ENSMUSG00000035597, Prpf39, pre-mRNA processing factor 39, [RH, Score=412, Expect=2e-134]} {Dmel: FBgn0039600, CG1646, [RH, Score=226, Expect=2e-62]} {Celegans: WBGene00017768, F25B4.5, [RH, Score=268, Expect=2e-79]} {RNA1509_16477} {RNA1310_3194} {RNA815_948.1}

Mlig455_048834 {REF} {Length: 3689} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13428.8, score=40.8]; Suppressor of forked protein (Suf) [PF05843.16, score=26.8]} {Human: ENSG00000185246, PRPF39, pre-mRNA processing factor 39, [RH, Score=420, Expect=2e-137]} {Mouse: ENSMUSG00000035597, Prpf39, pre-mRNA processing factor 39, [RH, Score=414, Expect=3e-135]} {Dmel: FBgn0039600, CG1646, [RH, Score=224, Expect=8e-62]} {Celegans: WBGene00017768, F25B4.5, [RH, Score=270, Expect=4e-80]} {RNA1509_16477, RNA1509_19574} {RNA1310_3194, RNA1509_16477, RNA1509_19574} {RNA1509_16477, RNA1509_19574, RNA815_948.1}
2. MligTC455_04366 654 13.63 Mlig455_052829

Neo: -

Age: -

 UPF2 2.39 - - 0.716 0.951 0.723 - Mlig455_052829 {REF} {Length: 4197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=172.7]; Up-frameshift suppressor 2 [PF04050.16, score=29.1]} {Human: ENSG00000151461, UPF2, UPF2, regulator of nonsense mediated mRNA decay, [Score=651, Expect=0.0]} {Mouse: ENSMUSG00000043241, Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), [Score=659, Expect=0.0]} {Dmel: FBgn0029992, Upf2, [Score=569, Expect=0.0]} {Celegans: WBGene00004881, smg-3, SMG-3; Suppressor with Morphological effect on Genitalia, [RH, Score=328, Expect=5e-94]} {Smed: dd_Smed_v6_7696_0_1, dd_Smed_v6_7696_0_1, [RH, Score=541, Expect=3e-172]} {RNA1509_10414} {RNA1310_2087} {RNA815_4700.1}
3. MligTC455_48492 928 19.33 Mlig455_041616

Neo: Int S/G2/M

Age: Down-Down-Up

 DDX42 1.68 - - - 0.957 0.723 - Mlig455_041616 {REF} {Length: 2637} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=159.2]; Helicase conserved C-terminal domain [PF00271.33, score=92.2]; Type III restriction enzyme, res subunit [PF04851.17, score=19.2]} {Human: ENSG00000198231, DDX42, DEAD-box helicase 42, [RH, Score=693, Expect=0.0]} {Mouse: ENSMUSG00000020705, Ddx42, DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, [RH, Score=694, Expect=0.0]} {Dmel: FBgn0036104, CG6418, [RH, Score=706, Expect=0.0]} {Celegans: WBGene00008119, C46F11.4, [RH, Score=602, Expect=0.0]} {Smed: dd_Smed_v6_5205_0_1, dd_Smed_v6_5205_0_1, [RH, Score=768, Expect=0.0]} {RNA1509_54259} {RNA1310_7512} {RNA815_2556}
4. MligTC455_34054 2761 57.51 Mlig455_000070, Mlig455_063736

Neo: -

Age: -

 EIF4G3 1.679 - - - 0.958 0.721 -

Mlig455_000070 {REF} {Length: 5242} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=107.1]; MA3 domain [PF02847.19, score=25.3]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [RH, Score=325, Expect=5e-90]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [RH, Score=339, Expect=4e-95]} {Dmel: FBgn0010488, NAT1, [Score=153, Expect=5e-37]} {Smed: dd_Smed_v6_3720_0_1, dd_Smed_v6_3720_0_1, [RH, Score=224, Expect=1e-59]} {RNA1509_35483} {RNA1310_1386.1} {RNA815_242.1}

Mlig455_063736 {REF} {Length: 5197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=107.1]; MA3 domain [PF02847.19, score=25.3]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [RH, Score=322, Expect=3e-89]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [RH, Score=340, Expect=2e-95]} {Dmel: FBgn0010488, NAT1, [Score=153, Expect=6e-37]} {Smed: dd_Smed_v6_3720_0_1, dd_Smed_v6_3720_0_1, [RH, Score=224, Expect=1e-59]} {RNA1509_35483} {RNA1310_1386.1} {RNA815_242.1}
5. MligTC455_24878 969 20.2 Mlig455_045252

Neo: -

Age: logFC(26M/2M)=1.306

Region-enriched R5: 1.363/0.04356

 LIMS2 0.967 - - - 0.967 - - Mlig455_045252 {REF} {Length: 1439} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=76.2]} {Human: ENSG00000072163, LIMS2, LIM zinc finger domain containing 2, [Score=92.0, Expect=3e-21]; ENSG00000256671, LIMS4, LIM zinc finger domain containing 4, [Score=87.8, Expect=1e-19]; ENSG00000256977, LIMS3, LIM zinc finger domain containing 3, [Score=87.8, Expect=1e-19]} {Mouse: ENSMUSG00000024395, Lims2, LIM and senescent cell antigen like domains 2, [Score=88.6, Expect=3e-20]; ENSMUSG00000019920, Lims1, LIM and senescent cell antigen-like domains 1, [Score=88.2, Expect=6e-20]} {Dmel: FBgn0020249, stck, steamer duck, [Score=101, Expect=4e-25]} {Celegans: WBGene00006826, unc-97, LIM domain-containing protein unc-97, [Score=107, Expect=2e-27]} {Smed: dd_Smed_v6_2476_0_1, dd_Smed_v6_2476_0_1, [Score=108, Expect=4e-28]} {RNA1509_24514} {RNA1310_13269.1} {RNA815_4936.1}
6. MligTC455_24879 857 17.85 Mlig455_069172

Neo: Int S/G2/M

Age: -

 LIMS2 0.965 - - - 0.965 - - Mlig455_069172 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=202.3]} {Human: ENSG00000072163, LIMS2, LIM zinc finger domain containing 2, [RH, Score=369, Expect=6e-126]; ENSG00000256977, LIMS3, LIM zinc finger domain containing 3, [RH, Score=368, Expect=4e-125]; ENSG00000256671, LIMS4, LIM zinc finger domain containing 4, [RH, Score=368, Expect=4e-125]; ENSG00000169756, LIMS1, LIM zinc finger domain containing 1, [RH, Score=365, Expect=2e-124]} {Mouse: ENSMUSG00000019920, Lims1, LIM and senescent cell antigen-like domains 1, [RH, Score=372, Expect=1e-126]; ENSMUSG00000024395, Lims2, LIM and senescent cell antigen like domains 2, [RH, Score=358, Expect=4e-122]} {Dmel: FBgn0020249, stck, steamer duck, [RH, Score=387, Expect=2e-133]} {Celegans: WBGene00006826, unc-97, LIM domain-containing protein unc-97, [RH, Score=377, Expect=1e-129]} {Smed: dd_Smed_v6_2476_0_1, dd_Smed_v6_2476_0_1, [RH, Score=427, Expect=2e-149]} {RNA1509_58964} {RNA1310_13680.2} {RNA815_4936.1}
7. MligTC455_20681 259 5.39 Mlig455_026768

Neo: -

Age: -

 0.958 - - - 0.958 - - Mlig455_026768 {REF} {Length: 2537} {RNA1509_46209} {RNA1310_63086} {RNA815_16672}
8. MligTC455_36808 1241 25.85 Mlig455_031991

Neo: -

Age: -

 0.953 - - - 0.953 - - Mlig455_031991 {REF} {Length: 6075} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.3]; UBA/TS-N domain [PF00627.33, score=19.2]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588, RNA1509_8892} {RNA1310_3692.1, RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588} {RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588, RNA815_13257.1}
9. MligTC455_47242 296 6.17 Mlig455_003663

Neo: -

Age: -

 0.953 - - - 0.953 - - Mlig455_003663 {REF} {Length: 1025} {TRANSSPLICED} {RNA1509_31838} {RNA1310_35713, RNA1509_31838} {RNA1509_31838, RNA815_10136}
10. MligTC455_37460 252 5.25 Mlig455_054249

Neo: Int S/G2/M

Age: logFC(26M/2M)=1.015

 MFSD3 0.952 - - 0.952 - - - Mlig455_054249 {REF} {Length: 2521} {TRANSSPLICED} {Human: ENSG00000167700, MFSD3, major facilitator superfamily domain containing 3, [Score=105, Expect=6e-25]} {Mouse: ENSMUSG00000019080, Mfsd3, major facilitator superfamily domain containing 3, [Score=107, Expect=6e-26]} {Smed: dd_Smed_v6_18318_0_1, dd_Smed_v6_18318_0_1, [Score=171, Expect=5e-50]} {RNA1509_41389} {RNA1310_7558} {RNA815_29269}

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