Data search


search
Exact
Search

Results for MligTC455_37267

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37267 9646 200.95 Mlig455_059336, Mlig455_065597

Neo: -

Age: -

Mlig455_059336 {REF} {Length: 835} {TRANSSPLICED} {Smed: dd_Smed_v6_298_0_1, dd_Smed_v6_298_0_1, [RH, Score=51.2, Expect=2e-09]} {RNA1509_31380, RNA1509_6257} {RNA1310_22870, RNA1509_6257} {RNA1509_6257, RNA815_10200}

Mlig455_065597 {REF} {Length: 848} {TRANSSPLICED} {Smed: dd_Smed_v6_298_0_1, dd_Smed_v6_298_0_1, [RH, Score=51.2, Expect=2e-09]} {RNA1509_31380} {RNA1310_1511.1} {RNA815_10200}

Cumulative graph for MligTC455_37267

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.047 7.772 0.06415 0.57473
RegionR2 -0.339 7.772 0.44430 0.83305
RegionR3 0.403 7.772 0.27512 0.81948
RegionR4 0.381 7.772 0.37775 0.70184
RegionR5 -1.091 7.772 0.00678 0.04352
RegionR6 0.209 7.772 0.57385 1.00000
RegionR7 0.718 7.772 0.04194 0.39336
RegionR8 0.765 7.772 0.04150 0.40005

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.878 7.772 0.25221 0.96702
RegenerationR2 -0.171 7.772 0.72036 0.96301
RegenerationR3 -0.417 7.772 0.39332 0.79838
RegenerationR4 -1.555 7.772 0.00262 0.06636
RegenerationR5 -0.356 7.772 0.46564 0.84037
RegenerationR6 -0.677 7.772 0.16485 0.49482
RegenerationBL -0.891 7.772 0.04014 0.22760
RegenerationTP -0.583 7.772 0.20523 0.64715


Genes with expression patterns similar to MligTC455_37267

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37267 9646 200.95 Mlig455_059336, Mlig455_065597

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_059336 {REF} {Length: 835} {TRANSSPLICED} {Smed: dd_Smed_v6_298_0_1, dd_Smed_v6_298_0_1, [RH, Score=51.2, Expect=2e-09]} {RNA1509_31380, RNA1509_6257} {RNA1310_22870, RNA1509_6257} {RNA1509_6257, RNA815_10200}

Mlig455_065597 {REF} {Length: 848} {TRANSSPLICED} {Smed: dd_Smed_v6_298_0_1, dd_Smed_v6_298_0_1, [RH, Score=51.2, Expect=2e-09]} {RNA1509_31380} {RNA1310_1511.1} {RNA815_10200}
2. MligTC455_16552 621 12.94 Mlig455_031188

Neo: -

Age: Down-Up-Up

USH1G 1.761 0.807 - - 0.954 - - Mlig455_031188 {REF} {Length: 2185} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=82.6]; Ankyrin repeats (many copies) [PF13637.8, score=74.2]; Ankyrin repeats (many copies) [PF13857.8, score=45.5]; Ankyrin repeat [PF13606.8, score=44.2]; Ankyrin repeat [PF00023.32, score=43.6]; SAM domain (Sterile alpha motif) [PF00536.32, score=25.8]} {Human: ENSG00000182040, USH1G, USH1 protein network component sans, [RH, Score=223, Expect=6e-67]} {Mouse: ENSMUSG00000045288, Ush1g, USH1 protein network component sans, [RH, Score=224, Expect=2e-67]} {Dmel: FBgn0033785, Sans, Scaffold protein containing ankyrin repeats and SAM domain, [RH, Score=150, Expect=7e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=68.2, Expect=8e-12]} {Smed: dd_Smed_v6_68524_0_1, dd_Smed_v6_68524_0_1, [RH, Score=117, Expect=9e-31]} {RNA1509_15656} {RNA1310_14657, RNA1509_15656} {RNA1509_15656, RNA815_12521}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA