TomoSeq data search

Data search

Results for MligTC455_37316

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37316	37	0.77	Mlig455_053896	Neo: - Age: -		Mlig455_053896 {REF} {Length: 1669} {NoTransDecoderORF} {RNA1310_67020}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_37316

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.776	1.033	1.00000	1.00000
RegionR2	3.313	1.033	0.99944	1.00000
RegionR3	0.235	1.033	0.99960	1.00000
RegionR4	-2.942	1.033	1.00000	1.00000
RegionR5	-0.855	1.033	1.00000	1.00000
RegionR6	0.426	1.033	0.99964	1.00000
RegionR7	1.134	1.033	0.99994	1.00000
RegionR8	1.464	1.033	0.99977	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	4.104	1.033	0.99950	1.00000
RegenerationR2	4.496	1.033	0.01407	0.19378
RegenerationR3	5.93	1.033	0.01047	0.18713
RegenerationR4	5.842	1.033	0.00673	0.11882
RegenerationR5	5.828	1.033	0.00605	0.14259
RegenerationR6	5.725	1.033	0.01247	0.13742
RegenerationBL	5.72	1.033	0.00919	0.09576
RegenerationTP	5.066	1.033	0.03568	0.31530

Genes with expression patterns similar to MligTC455_37316

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37316	37	0.77	Mlig455_053896	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_053896 {REF} {Length: 1669} {NoTransDecoderORF} {RNA1310_67020}
2.	MligTC455_45504	157	3.28	Mlig455_044970	Neo: - Age: logFC(26M/2M)=-0.552	PITPNM3	0.955	-	-	-	-	0.955	-	Mlig455_044970 {REF} {Length: 5174} {TRANSSPLICED} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=344.3]; DDHD domain [PF02862.19, score=123.0]} {Human: ENSG00000091622, PITPNM3, PITPNM family member 3, [Score=440, Expect=1e-135]; ENSG00000090975, PITPNM2, phosphatidylinositol transfer protein membrane associated 2, [Score=432, Expect=2e-129]; ENSG00000110697, PITPNM1, phosphatidylinositol transfer protein membrane associated 1, [Score=420, Expect=9e-126]} {Mouse: ENSMUSG00000040543, Pitpnm3, PITPNM family member 3, [Score=446, Expect=6e-138]; ENSMUSG00000029406, Pitpnm2, phosphatidylinositol transfer protein, membrane-associated 2, [Score=434, Expect=6e-131]} {Dmel: FBgn0003218, rdgB, retinal degeneration B, [Score=507, Expect=4e-158]} {Celegans: WBGene00010813, pitp-1, PhosphatidylInositol Transfer Protein family, [RH, Score=355, Expect=1e-104]} {Smed: dd_Smed_v6_7211_0_2, dd_Smed_v6_7211_0_2, [Score=861, Expect=0.0]} {RNA1509_24836} {RNA1310_4306} {RNA815_17070}
3.	MligTC455_24882	1134	23.63	Mlig455_015434	Neo: - Age: logFC(26M/2M)=0.257	PUF60	0.95	-	-	-	-	-	0.950	Mlig455_015434 {REF} {Length: 1998} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=143.3]; RNA recognition motif [PF16367.7, score=33.4]; Occluded RNA-recognition motif [PF16842.7, score=21.3]} {Human: ENSG00000179950, PUF60, poly(U) binding splicing factor 60, [RH, Score=235, Expect=3e-73]; ENSG00000274081, PUF60, poly(U) binding splicing factor 60, [RH, Score=235, Expect=3e-71]} {Mouse: ENSMUSG00000002524, Puf60, poly-U binding splicing factor 60, [RH, Score=235, Expect=6e-71]} {Dmel: FBgn0028577, hfp, half pint, [RH, Score=231, Expect=8e-69]} {Celegans: WBGene00004389, rnp-6, RNP (RRM RNA binding domain) containing, [Score=195, Expect=2e-58]} {Smed: dd_Smed_v6_3853_0_3, dd_Smed_v6_3853_0_3, [RH, Score=322, Expect=2e-105]} {RNA1509_10213} {RNA1310_12724, RNA1509_10213} {RNA1509_10213, RNA815_16936}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_37316

0.77

Mlig455_053896

Neo: -

Age: -

1.000

Mlig455_053896 {REF} {Length: 1669} {NoTransDecoderORF} {RNA1310_67020}

MligTC455_45504

157

3.28

Mlig455_044970

Neo: -

Age: logFC(26M/2M)=-0.552

PITPNM3

0.955

Mlig455_044970 {REF} {Length: 5174} {TRANSSPLICED} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=344.3]; DDHD domain [PF02862.19, score=123.0]} {Human: ENSG00000091622, PITPNM3, PITPNM family member 3, [Score=440, Expect=1e-135]; ENSG00000090975, PITPNM2, phosphatidylinositol transfer protein membrane associated 2, [Score=432, Expect=2e-129]; ENSG00000110697, PITPNM1, phosphatidylinositol transfer protein membrane associated 1, [Score=420, Expect=9e-126]} {Mouse: ENSMUSG00000040543, Pitpnm3, PITPNM family member 3, [Score=446, Expect=6e-138]; ENSMUSG00000029406, Pitpnm2, phosphatidylinositol transfer protein, membrane-associated 2, [Score=434, Expect=6e-131]} {Dmel: FBgn0003218, rdgB, retinal degeneration B, [Score=507, Expect=4e-158]} {Celegans: WBGene00010813, pitp-1, PhosphatidylInositol Transfer Protein family, [RH, Score=355, Expect=1e-104]} {Smed: dd_Smed_v6_7211_0_2, dd_Smed_v6_7211_0_2, [Score=861, Expect=0.0]} {RNA1509_24836} {RNA1310_4306} {RNA815_17070}

MligTC455_24882

1134

23.63

Mlig455_015434

Neo: -

Age: logFC(26M/2M)=0.257

PUF60

0.95

0.950

Mlig455_015434 {REF} {Length: 1998} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=143.3]; RNA recognition motif [PF16367.7, score=33.4]; Occluded RNA-recognition motif [PF16842.7, score=21.3]} {Human: ENSG00000179950, PUF60, poly(U) binding splicing factor 60, [RH, Score=235, Expect=3e-73]; ENSG00000274081, PUF60, poly(U) binding splicing factor 60, [RH, Score=235, Expect=3e-71]} {Mouse: ENSMUSG00000002524, Puf60, poly-U binding splicing factor 60, [RH, Score=235, Expect=6e-71]} {Dmel: FBgn0028577, hfp, half pint, [RH, Score=231, Expect=8e-69]} {Celegans: WBGene00004389, rnp-6, RNP (RRM RNA binding domain) containing, [Score=195, Expect=2e-58]} {Smed: dd_Smed_v6_3853_0_3, dd_Smed_v6_3853_0_3, [RH, Score=322, Expect=2e-105]} {RNA1509_10213} {RNA1310_12724, RNA1509_10213} {RNA1509_10213, RNA815_16936}