TomoSeq data search

Data search

Results for MligTC455_37407

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37407	58	1.21	Mlig455_004515, Mlig455_029826	Neo: - Age: -	PCDH1	Mlig455_004515 {REF} {Length: 740} Mlig455_029826 {REF} {Length: 4365} {Pfam: Cadherin domain [PF00028.19, score=188.5]; Cadherin-like [PF16184.7, score=39.7]; Cadherin-like [PF08266.14, score=35.6]} {Human: ENSG00000156453, PCDH1, protocadherin 1, [Score=238, Expect=5e-64]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=229, Expect=1e-60]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=238, Expect=3e-64]} {Dmel: FBgn0001075, ft, fat, [Score=191, Expect=8e-49]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=172, Expect=6e-43]} {Smed: dd_Smed_v6_12023_0_1, dd_Smed_v6_12023_0_1, [Score=313, Expect=1e-90]} {RNA1509_51850} {RNA1310_22215, RNA1509_51850} {RNA1509_51850, RNA815_40565}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37407

1.21

Mlig455_004515, Mlig455_029826

Neo: -

Age: -

PCDH1

Mlig455_004515 {REF} {Length: 740}

Mlig455_029826 {REF} {Length: 4365} {Pfam: Cadherin domain [PF00028.19, score=188.5]; Cadherin-like [PF16184.7, score=39.7]; Cadherin-like [PF08266.14, score=35.6]} {Human: ENSG00000156453, PCDH1, protocadherin 1, [Score=238, Expect=5e-64]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=229, Expect=1e-60]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=238, Expect=3e-64]} {Dmel: FBgn0001075, ft, fat, [Score=191, Expect=8e-49]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=172, Expect=6e-43]} {Smed: dd_Smed_v6_12023_0_1, dd_Smed_v6_12023_0_1, [Score=313, Expect=1e-90]} {RNA1509_51850} {RNA1310_22215, RNA1509_51850} {RNA1509_51850, RNA815_40565}

Cumulative graph for MligTC455_37407

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.951	1.513	0.99965	1.00000
RegionR2	1.577	1.513	0.28155	0.66821
RegionR3	1.236	1.513	0.31884	0.85712
RegionR4	0.716	1.513	0.54957	0.87043
RegionR5	0.562	1.513	0.57795	0.93671
RegionR6	2.126	1.513	0.06758	0.48568
RegionR7	1.51	1.513	0.29706	0.93187
RegionR8	-3.776	1.513	0.99988	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.397	1.513	0.99998	1.00000
RegenerationR2	-0.263	1.513	0.70419	0.95780
RegenerationR3	-0.921	1.513	0.32462	0.75204
RegenerationR4	-1.308	1.513	0.22340	0.67149
RegenerationR5	0.137	1.513	0.86836	1.00000
RegenerationR6	-1.617	1.513	0.07003	0.33152
RegenerationBL	0.594	1.513	0.65243	0.98898
RegenerationTP	-2.65	1.513	0.99968	1.00000

Genes with expression patterns similar to MligTC455_37407

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37407	58	1.21	Mlig455_004515, Mlig455_029826	Neo: - Age: -	PCDH1	5	1.000	1.000	1.000	1.000	1.000	-	Mlig455_004515 {REF} {Length: 740} Mlig455_029826 {REF} {Length: 4365} {Pfam: Cadherin domain [PF00028.19, score=188.5]; Cadherin-like [PF16184.7, score=39.7]; Cadherin-like [PF08266.14, score=35.6]} {Human: ENSG00000156453, PCDH1, protocadherin 1, [Score=238, Expect=5e-64]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=229, Expect=1e-60]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=238, Expect=3e-64]} {Dmel: FBgn0001075, ft, fat, [Score=191, Expect=8e-49]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=172, Expect=6e-43]} {Smed: dd_Smed_v6_12023_0_1, dd_Smed_v6_12023_0_1, [Score=313, Expect=1e-90]} {RNA1509_51850} {RNA1310_22215, RNA1509_51850} {RNA1509_51850, RNA815_40565}
2.	MligTC455_24286	85	1.76	Mlig455_062007	Neo: - Age: logFC(26M/2M)=0.677	PIGG	0.974	-	-	0.974	-	-	-	Mlig455_062007 {REF} {Length: 4663} {TRANSSPLICED} {Pfam: GPI ethanolamine phosphate transferase membrane region [PF19316.1, score=110.5]; Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=48.7]; Sulfatase [PF00884.25, score=24.7]} {Human: ENSG00000174227, PIGG, phosphatidylinositol glycan anchor biosynthesis class G, [RH, Score=218, Expect=3e-61]} {Mouse: ENSMUSG00000029263, Pigg, phosphatidylinositol glycan anchor biosynthesis, class G, [RH, Score=213, Expect=3e-56]} {Dmel: FBgn0033187, PIG-G, Phosphatidylinositol glycan anchor biosynthesis class G, [RH, Score=172, Expect=1e-43]} {Celegans: WBGene00009204, F28C6.4, [RH, Score=189, Expect=1e-49]} {Smed: dd_Smed_v6_10095_0_1, dd_Smed_v6_10095_0_1, [RH, Score=242, Expect=1e-66]} {RNA1509_30824} {RNA1310_20277} {RNA815_18402}
3.	MligTC455_42913	155	3.24	Mlig455_006348, Mlig455_061246	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.455	ANK1	0.954	-	-	0.954	-	-	-	Mlig455_006348 {REF} {Length: 4363} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=249.4]; Ankyrin repeats (many copies) [PF13637.8, score=158.4]; Ankyrin repeat [PF13606.8, score=142.2]; Ankyrin repeat [PF00023.32, score=127.7]; Ankyrin repeats (many copies) [PF13857.8, score=124.9]; Mab-21 protein [PF03281.16, score=28.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=176, Expect=3e-44]; ENSG00000151150, ANK3, ankyrin 3, [Score=168, Expect=1e-41]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=170, Expect=2e-42]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=170, Expect=2e-44]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=157, Expect=8e-39]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=177, Expect=5e-45]} {RNA1509_38396} {RNA1310_3944.2} {RNA815_1969} Mlig455_061246 {REF} {Length: 181} {NoTransDecoderORF} {RNA1310_3944.2} {RNA815_50963}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_37407

1.21

Mlig455_004515, Mlig455_029826

Neo: -

Age: -

PCDH1

1.000

Mlig455_004515 {REF} {Length: 740}

MligTC455_24286

1.76

Mlig455_062007

Neo: -

Age: logFC(26M/2M)=0.677

PIGG

0.974

Mlig455_062007 {REF} {Length: 4663} {TRANSSPLICED} {Pfam: GPI ethanolamine phosphate transferase membrane region [PF19316.1, score=110.5]; Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=48.7]; Sulfatase [PF00884.25, score=24.7]} {Human: ENSG00000174227, PIGG, phosphatidylinositol glycan anchor biosynthesis class G, [RH, Score=218, Expect=3e-61]} {Mouse: ENSMUSG00000029263, Pigg, phosphatidylinositol glycan anchor biosynthesis, class G, [RH, Score=213, Expect=3e-56]} {Dmel: FBgn0033187, PIG-G, Phosphatidylinositol glycan anchor biosynthesis class G, [RH, Score=172, Expect=1e-43]} {Celegans: WBGene00009204, F28C6.4, [RH, Score=189, Expect=1e-49]} {Smed: dd_Smed_v6_10095_0_1, dd_Smed_v6_10095_0_1, [RH, Score=242, Expect=1e-66]} {RNA1509_30824} {RNA1310_20277} {RNA815_18402}

MligTC455_42913

155

3.24

Mlig455_006348, Mlig455_061246

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.455

ANK1

0.954

Mlig455_006348 {REF} {Length: 4363} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=249.4]; Ankyrin repeats (many copies) [PF13637.8, score=158.4]; Ankyrin repeat [PF13606.8, score=142.2]; Ankyrin repeat [PF00023.32, score=127.7]; Ankyrin repeats (many copies) [PF13857.8, score=124.9]; Mab-21 protein [PF03281.16, score=28.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=176, Expect=3e-44]; ENSG00000151150, ANK3, ankyrin 3, [Score=168, Expect=1e-41]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=170, Expect=2e-42]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=170, Expect=2e-44]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=157, Expect=8e-39]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=177, Expect=5e-45]} {RNA1509_38396} {RNA1310_3944.2} {RNA815_1969}

Mlig455_061246 {REF} {Length: 181} {NoTransDecoderORF} {RNA1310_3944.2} {RNA815_50963}