Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_37413 | 178 | 3.71 | Mlig455_000359 | Neo: Irradiation Age: Up-Down-Down |
Mlig455_000359 {REF} {Length: 3282} {Smed: dd_Smed_v6_8765_0_1, dd_Smed_v6_8765_0_1, [RH, Score=60.5, Expect=2e-10]} {RNA1509_20341} {RNA1310_15756.1, RNA1509_20341} {RNA1509_20341, RNA815_34876} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -0.745 | 2.727 | 0.96889 | 1.00000 | |
RegionR2 | 2.616 | 2.727 | 0.00471 | 0.06176 | |
RegionR3 | 1.364 | 2.727 | 0.10634 | 0.56929 | |
RegionR4 | 1.66 | 2.727 | 0.02226 | 0.11008 | |
RegionR5 | 0.254 | 2.727 | 0.65553 | 1.00000 | |
RegionR6 | 0.49 | 2.727 | 0.54056 | 1.00000 | |
RegionR7 | 0.003 | 2.727 | 0.81159 | 1.00000 | |
RegionR8 | -5.642 | 2.727 | 0.05313 | 0.44936 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -4.881 | 2.727 | 0.40019 | 1.00000 | |
RegenerationR2 | 0.191 | 2.727 | 0.70288 | 0.95726 | |
RegenerationR3 | 0.959 | 2.727 | 0.10887 | 0.52029 | |
RegenerationR4 | -0.716 | 2.727 | 0.25353 | 0.70160 | |
RegenerationR5 | -0.622 | 2.727 | 0.33765 | 0.75614 | |
RegenerationR6 | -0.029 | 2.727 | 0.97166 | 1.00000 | |
RegenerationBL | 1.602 | 2.727 | 0.31635 | 0.68293 | |
RegenerationTP | -1.853 | 2.727 | 0.98599 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_37413 | 178 | 3.71 | Mlig455_000359 | Neo: Irradiation Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_000359 {REF} {Length: 3282} {Smed: dd_Smed_v6_8765_0_1, dd_Smed_v6_8765_0_1, [RH, Score=60.5, Expect=2e-10]} {RNA1509_20341} {RNA1310_15756.1, RNA1509_20341} {RNA1509_20341, RNA815_34876} | |
2. | MligTC455_40834 | 509 | 10.61 | Mlig455_067713 | Neo: - |
3.386 | - | - | 0.766 | 0.960 | 0.840 | 0.820 | Mlig455_067713 {REF} {Length: 1423} {Smed: dd_Smed_v6_10173_0_1, dd_Smed_v6_10173_0_1, [Score=49.3, Expect=5e-07]} {RNA1509_23138} {RNA1310_23456.1} {RNA815_37333} | |
3. | MligTC455_47171 | 125 | 2.61 | Mlig455_027708 | Neo: - Age: Up-Down-Down Region-enriched R2: 3.385/0.02638 |
TCF7L2 | 3.301 | - | - | 0.743 | 0.972 | 0.720 | 0.866 | Mlig455_027708 {REF} {Length: 4153} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=75.0]; HMG-box domain [PF09011.12, score=30.1]} {Human: ENSG00000148737, TCF7L2, transcription factor 7 like 2, [RH, Score=189, Expect=1e-50]; ENSG00000081059, TCF7, transcription factor 7, [RH, Score=185, Expect=4e-50]} {Mouse: ENSMUSG00000024985, Tcf7l2, transcription factor 7 like 2, T cell specific, HMG box, [Score=187, Expect=9e-50]} {Dmel: FBgn0085432, pan, pangolin, [RH, Score=188, Expect=2e-49]} {Celegans: WBGene00004077, pop-1, [RH, Score=118, Expect=4e-28]} {Smed: dd_Smed_v6_8152_0_1, dd_Smed_v6_8152_0_1, [RH, Score=193, Expect=4e-52]} {RNA1509_7090} {RNA1310_2735.1} {RNA815_5131} |
4. | MligTC455_13102 | 65 | 1.35 | Mlig455_056246 | Neo: - Age: Up-Down-Down Region-enriched R2: 6.206/0.00027 |
NWD2 | 2.546 | 0.956 | - | 0.827 | 0.763 | - | - | Mlig455_056246 {REF} {Length: 8104} {Pfam: NACHT domain [PF05729.14, score=51.2]; AAA ATPase domain [PF13191.8, score=36.8]; Domain of unknown function (DUF4062) [PF13271.8, score=36.5]; ATPase domain predominantly from Archaea [PF01637.20, score=23.7]; AAA domain [PF13401.8, score=20.6]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=451, Expect=2e-130]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [RH, Score=436, Expect=2e-125]} {Dmel: FBgn0038397, CG10185, [RH, Score=980, Expect=0.0]} {Celegans: WBGene00020254, T05C3.2, [RH, Score=925, Expect=0.0]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [Score=344, Expect=9e-96]} {RNA1509_20730} {RNA1310_1147} {RNA815_11922} |
5. | MligTC455_24868 | 641 | 13.36 | Mlig455_036744 | Neo: - Age: - |
2.435 | - | - | - | 0.706 | 0.772 | 0.957 | Mlig455_036744 {REF} {Length: 2718} {TRANSSPLICED} {Celegans: WBGene00021017, cil-7, CILiary localization, [RH, Score=238, Expect=4e-71]} {RNA1509_11135} {RNA1310_7801.1} {RNA815_4350.1} | |
6. | MligTC455_20741 | 1226 | 25.53 | Mlig455_031347 | Neo: - Age: - |
RPS24 | 1.832 | - | - | - | 0.958 | 0.874 | - | Mlig455_031347 {REF} {Length: 1920} {TRANSSPLICED} {Pfam: Ribosomal protein S24e [PF01282.21, score=67.8]; Ankyrin repeats (3 copies) [PF12796.9, score=37.1]; Ankyrin repeats (many copies) [PF13637.8, score=22.3]; Ankyrin repeats (many copies) [PF13857.8, score=19.2]} {Human: ENSG00000138326, RPS24, ribosomal protein S24, [RH, Score=90.1, Expect=2e-19]} {Mouse: ENSMUSG00000025290, Rps24, ribosomal protein S24, [RH, Score=84.3, Expect=5e-19]} {Dmel: FBgn0261596, RpS24, Ribosomal protein S24, [RH, Score=99.8, Expect=1e-24]} {Celegans: WBGene00004493, rps-24, Ribosomal Protein, Small subunit, [RH, Score=107, Expect=1e-27]} {Smed: dd_Smed_v6_164_0_1, dd_Smed_v6_164_0_1, [RH, Score=97.1, Expect=8e-24]} {RNA1509_18314} {RNA1310_15458} {RNA815_6508} |
7. | MligTC455_39845 | 141 | 2.94 | Mlig455_002533, Mlig455_002635 | Neo: - Age: - Region-enriched R2: 3.456/0.04589 |
DLX6 | 1.759 | - | - | - | 0.806 | 0.953 | - | Mlig455_002533 {REF} {Length: 2344} {Pfam: Homeodomain [PF00046.31, score=75.8]} {Human: ENSG00000006377, DLX6, distal-less homeobox 6, [RH, Score=135, Expect=3e-36]} {Mouse: ENSMUSG00000029754, Dlx6, distal-less homeobox 6, [RH, Score=136, Expect=1e-36]} {Dmel: FBgn0000157, Dll, Distal-less, [RH, Score=135, Expect=4e-36]} {Celegans: WBGene00000463, ceh-43, Homeobox protein ceh-43, [RH, Score=107, Expect=2e-26]} {Smed: dd_Smed_v6_19040_0_1, dd_Smed_v6_19040_0_1, [RH, Score=151, Expect=9e-41]} {RNA1509_39701} {RNA1310_10459.1, RNA1509_39701} {RNA1509_39701, RNA815_21765} Mlig455_002635 {REF} {Length: 2355} {Pfam: Homeodomain [PF00046.31, score=74.4]} {Human: ENSG00000006377, DLX6, distal-less homeobox 6, [RH, Score=135, Expect=3e-36]} {Mouse: ENSMUSG00000029754, Dlx6, distal-less homeobox 6, [RH, Score=136, Expect=1e-36]} {Dmel: FBgn0000157, Dll, Distal-less, [RH, Score=135, Expect=4e-36]} {Celegans: WBGene00000463, ceh-43, Homeobox protein ceh-43, [RH, Score=107, Expect=2e-26]} {Smed: dd_Smed_v6_19040_0_1, dd_Smed_v6_19040_0_1, [RH, Score=151, Expect=1e-40]} {RNA1509_39701} {RNA1310_10459.1} {RNA815_21765} |
8. | MligTC455_06090 | 223 | 4.65 | Mlig455_037743 | Neo: - Age: Down-Up-Up |
1.724 | - | - | - | 0.955 | 0.769 | - | Mlig455_037743 {REF} {Length: 1087} {RNA1509_10108} {RNA1310_12853.1} {RNA815_29647} | |
9. | MligTC455_22848 | 16 | 0.34 | Mlig455_022213 | Neo: Germline Age: Up-Down-Down Region-enriched R2: 5.394/0.04048 |
1.701 | 0.952 | 0.749 | - | - | - | - | Mlig455_022213 {REF} {Length: 2734} {RNA1509_19959} {RNA1310_11071.1} {RNA815_27127} | |
10. | MligTC455_46225 | 70 | 1.46 | Mlig455_031511 | Neo: - Age: - |
1.67 | 0.961 | - | - | 0.709 | - | - | Mlig455_031511 {REF} {Length: 4676} {NoTransDecoderORF} {RNA1509_25000} {RNA1310_43728} {RNA815_50636} | |
11. | MligTC455_11904 | 34 | 0.71 | Mlig455_052381, Mlig455_064133 | Neo: - Age: Up-Down-Up |
0.972 | - | - | - | - | 0.972 | - | Mlig455_052381 {REF} {Length: 6581} {RNA1509_49721} {RNA1310_18098} {RNA815_61989} Mlig455_064133 {REF} {Length: 5051} {RNA1509_49721} {RNA1310_18098} {RNA815_61989} |
|
12. | MligTC455_42811 | 253 | 5.26 | Mlig455_026720 | Neo: - Age: Down-Up-Up |
0.971 | - | - | - | - | 0.971 | - | Mlig455_026720 {REF} {Length: 4037} {TRANSSPLICED} {Smed: dd_Smed_v6_11800_0_1, dd_Smed_v6_11800_0_1, [RH, Score=162, Expect=1e-40]} {RNA1509_15861} {RNA1310_17697.1, RNA1509_15861} {RNA1509_15861, RNA815_12504} | |
13. | MligTC455_40413 | 11 | 0.23 | Mlig455_031582 | Neo: - Age: Up-Down-Down |
RPS6KA2 | 0.97 | 0.970 | - | - | - | - | - | Mlig455_031582 {REF} {Length: 2132} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=197.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=128.5]; Fungal protein kinase [PF17667.3, score=24.7]} {Human: ENSG00000071242, RPS6KA2, ribosomal protein S6 kinase A2, [Score=172, Expect=2e-46]; ENSG00000177189, RPS6KA3, ribosomal protein S6 kinase A3, [Score=170, Expect=9e-46]; ENSG00000117676, RPS6KA1, ribosomal protein S6 kinase A1, [Score=166, Expect=2e-44]; ENSG00000072133, RPS6KA6, ribosomal protein S6 kinase A6, [Score=166, Expect=2e-44]; ENSG00000281877, RPS6KA1, ribosomal protein S6 kinase A1, [Score=166, Expect=2e-44]} {Mouse: ENSMUSG00000023809, Rps6ka2, ribosomal protein S6 kinase, polypeptide 2, [Score=172, Expect=1e-46]; ENSMUSG00000031309, Rps6ka3, ribosomal protein S6 kinase polypeptide 3, [Score=170, Expect=6e-46]; ENSMUSG00000116203, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=166, Expect=3e-44]; ENSMUSG00000025665, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=166, Expect=3e-44]; ENSMUSG00000003644, Rps6ka1, ribosomal protein S6 kinase polypeptide 1, [Score=165, Expect=3e-44]} {Dmel: FBgn0261854, aPKC, atypical protein kinase C, [Score=158, Expect=8e-43]} {Celegans: WBGene00044281, R04A9.7, [Score=180, Expect=3e-52]} {Smed: dd_Smed_v6_5658_0_1, dd_Smed_v6_5658_0_1, [Score=170, Expect=1e-47]} {RNA1509_9936} {RNA1310_7164} {RNA815_13024.1} |
14. | MligTC455_49548 | 163 | 3.4 | Mlig455_028627 | Neo: - Age: - |
NR6A1 | 0.968 | 0.968 | - | - | - | - | - | Mlig455_028627 {REF} {Length: 4064} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=49.2]; Zinc finger, C2H2 type [PF00096.28, score=22.5]} {Human: ENSG00000148200, NR6A1, nuclear receptor subfamily 6 group A member 1, [Score=65.1, Expect=4e-11]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=64.3, Expect=2e-10]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=67.0, Expect=6e-12]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=63.5, Expect=5e-10]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=76.3, Expect=2e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=75.5, Expect=6e-14]} {RNA1509_44831, RNA1509_56197} {RNA1310_45687.1, RNA1509_44831} {RNA1509_44831, RNA815_27369.2} |
15. | MligTC455_24568 | 25 | 0.51 | Mlig455_038127 | Neo: - Age: Down-Up-Down |
CACNA2D2 | 0.967 | - | - | - | - | 0.967 | - | Mlig455_038127 {REF} {Length: 4202} {Pfam: von Willebrand factor type A domain [PF13519.8, score=41.5]; von Willebrand factor type A domain [PF00092.30, score=36.2]; von Willebrand factor type A domain [PF13768.8, score=30.8]} {Human: ENSG00000007402, CACNA2D2, calcium voltage-gated channel auxiliary subunit alpha2delta 2, [Score=82.8, Expect=2e-16]; ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=79.3, Expect=3e-15]; ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [Score=79.0, Expect=4e-15]} {Mouse: ENSMUSG00000010066, Cacna2d2, calcium channel, voltage-dependent, alpha 2/delta subunit 2, [Score=82.4, Expect=2e-16]; ENSMUSG00000040118, Cacna2d1, calcium channel, voltage-dependent, alpha2/delta subunit 1, [Score=79.3, Expect=3e-15]} {Celegans: WBGene00007041, tag-180, [Score=62.0, Expect=4e-10]} {Smed: dd_Smed_v6_19048_0_1, dd_Smed_v6_19048_0_1, [Score=430, Expect=2e-140]} {RNA1509_28096} {RNA1310_2030} {RNA815_1872} |
16. | MligTC455_36027 | 13 | 0.27 | Mlig455_047858 | Neo: - Age: - |
0.963 | 0.963 | - | - | - | - | - | Mlig455_047858 {REF} {Length: 1665} {TRANSSPLICED} {RNA1310_42727} {RNA815_53178} | |
17. | MligTC455_50338 | 421 | 8.78 | Mlig455_046702 | Neo: - Age: - |
SEPT4 | 0.96 | 0.960 | - | - | - | - | - | Mlig455_046702 {REF} {Length: 3017} {Pfam: Septin [PF00735.20, score=395.0]; 50S ribosome-binding GTPase [PF01926.25, score=37.9]; RsgA GTPase [PF03193.18, score=35.2]; Dynamin family [PF00350.25, score=23.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.3]; AIG1 family [PF04548.18, score=20.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=19.5]; ABC transporter [PF00005.29, score=19.2]; AAA domain [PF13479.8, score=18.8]; Virulence-associated protein E [PF05272.13, score=18.1]} {Human: ENSG00000108387, SEPT4, septin 4, [Score=433, Expect=2e-148]; ENSG00000284874, SEPT5-GP1BB, SEPT5-GP1BB readthrough, [Score=432, Expect=8e-150]; ENSG00000184702, SEPT5, septin 5, [Score=432, Expect=7e-150]} {Mouse: ENSMUSG00000020486, Sept4, septin 4, [Score=431, Expect=3e-149]; ENSMUSG00000072214, Sept5, septin 5, [Score=425, Expect=4e-147]; ENSMUSG00000116594, AC133488.1, novel protein, [Score=412, Expect=4e-142]} {Dmel: FBgn0259923, Sep4, Septin 4, [Score=424, Expect=6e-147]} {Celegans: WBGene00006793, unc-59, [Score=284, Expect=5e-91]} {Smed: dd_Smed_v6_1717_0_1, dd_Smed_v6_1717_0_1, [Score=467, Expect=7e-163]} {RNA1509_20078} {RNA1310_19211} {RNA815_7267} |
18. | MligTC455_11173 | 11 | 0.23 | Mlig455_016393 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_016393 {REF} {Length: 1000} {NoTransDecoderORF} | |
19. | MligTC455_28727 | 264 | 5.5 | Mlig455_041032 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.393 Region-enriched R3: 3.411/0.00032 |
0.956 | 0.956 | - | - | - | - | - | Mlig455_041032 {REF} {Length: 2729} {Pfam: Keratin, high sulfur B2 protein [PF13885.8, score=53.7]} {Dmel: FBgn0052602, Muc12Ea, Mucin 12Ea, [RH, Score=235, Expect=6e-64]} {RNA1509_37634} {RNA1310_40637} {RNA815_35031} | |
20. | MligTC455_49550 | 650 | 13.55 | Mlig455_035011 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_035011 {REF} {Length: 1151} {RNA1509_15666, RNA1509_28504} {RNA1310_5704, RNA1509_28504} {RNA1509_28504, RNA815_33238} | |
21. | MligTC455_52442 | 73 | 1.53 | Mlig455_007385 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_007385 {REF} {Length: 1068} {NoTransDecoderORF} {RNA1310_134979} | |
22. | MligTC455_02785 | 22 | 0.46 | Mlig455_002728 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_002728 {REF} {Length: 980} | |
23. | MligTC455_13387 | 96 | 2 | Mlig455_030047 | Neo: - Age: Down-Up-Down |
TRPT1 | 0.952 | 0.952 | - | - | - | - | - | Mlig455_030047 {REF} {Length: 2749} {Pfam: RNA 2'-phosphotransferase, Tpt1 / KptA family [PF01885.18, score=188.2]} {Human: ENSG00000149743, TRPT1, tRNA phosphotransferase 1, [Score=157, Expect=4e-47]} {Mouse: ENSMUSG00000047656, Trpt1, tRNA phosphotransferase 1, [Score=151, Expect=4e-45]} {Dmel: FBgn0053057, CG33057, [RH, Score=149, Expect=9e-45]} {Smed: dd_Smed_v6_5292_0_2, dd_Smed_v6_5292_0_2, [Score=142, Expect=1e-41]} {RNA1509_34325} {RNA1310_32352} {RNA815_14968} |
24. | MligTC455_33954 | 280 | 5.84 | Mlig455_058149 | Neo: - Age: - |
0.952 | 0.952 | - | - | - | - | - | Mlig455_058149 {REF} {Length: 3221} {RNA1310_32323} {RNA815_59403} | |
25. | MligTC455_41760 | 52 | 1.09 | Mlig455_046852 | Neo: - Age: - |
0.951 | 0.951 | - | - | - | - | - | Mlig455_046852 {REF} {Length: 2522} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_58903} {RNA815_47584} |