Data search


search
Exact
Search

Results for MligTC455_37417

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37417 844 17.59 Mlig455_064182, Mlig455_064241, Mlig455_067260

Neo: -

Age: -

PRR9

Mlig455_064182 {REF} {Length: 5847} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=74.3, Expect=3e-15]} {RNA1509_36260} {RNA1310_622.1} {RNA815_2514.1}

Mlig455_064241 {REF} {Length: 1614} {RNA1509_20204} {RNA1310_28559.1} {RNA815_14147}

Mlig455_067260 {REF} {Length: 725} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.4, Expect=1e-06]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=48.5, Expect=3e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=55.1, Expect=1e-08]}

Cumulative graph for MligTC455_37417

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.042 4.482 0.97064 1.00000
RegionR2 -0.059 4.482 0.88954 1.00000
RegionR3 -0.038 4.482 0.91300 1.00000
RegionR4 0.395 4.482 0.35496 0.67732
RegionR5 0.059 4.482 0.85464 1.00000
RegionR6 0.13 4.482 0.71100 1.00000
RegionR7 -0.046 4.482 0.92239 1.00000
RegionR8 -0.399 4.482 0.51453 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.771 4.482 0.21981 0.95484
RegenerationR2 0.55 4.482 0.09403 0.48847
RegenerationR3 0.111 4.482 0.77197 0.97230
RegenerationR4 -0.105 4.482 0.79037 0.98408
RegenerationR5 0.407 4.482 0.24576 0.67881
RegenerationR6 0.227 4.482 0.55168 0.83983
RegenerationBL 0.045 4.482 0.92541 1.00000
RegenerationTP -0.395 4.482 0.47575 0.88494


Genes with expression patterns similar to MligTC455_37417

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37417 844 17.59 Mlig455_064182, Mlig455_064241, Mlig455_067260

Neo: -

Age: -

PRR9 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_064182 {REF} {Length: 5847} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=74.3, Expect=3e-15]} {RNA1509_36260} {RNA1310_622.1} {RNA815_2514.1}

Mlig455_064241 {REF} {Length: 1614} {RNA1509_20204} {RNA1310_28559.1} {RNA815_14147}

Mlig455_067260 {REF} {Length: 725} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.4, Expect=1e-06]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=48.5, Expect=3e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=55.1, Expect=1e-08]}
2. MligTC455_37415 889 18.52 Mlig455_060268, Mlig455_060277

Neo: -

Age: -

DOCK1 5.923 0.994 0.987 0.970 0.992 0.991 0.989

Mlig455_060268 {REF} {Length: 7626} {TRANSSPLICED} {Pfam: Dock homology region 2 [PF06920.15, score=104.3]; C2 domain in Dock180 and Zizimin proteins [PF14429.8, score=83.1]; DOCK N-terminus [PF16172.7, score=24.4]} {Human: ENSG00000150760, DOCK1, dedicator of cytokinesis 1, [RH, Score=267, Expect=2e-71]} {Mouse: ENSMUSG00000044447, Dock5, dedicator of cytokinesis 5, [RH, Score=264, Expect=1e-70]; ENSMUSG00000020143, Dock2, dedicator of cyto-kinesis 2, [RH, Score=252, Expect=5e-67]} {Dmel: FBgn0264324, spg, sponge, [RH, Score=171, Expect=4e-42]} {Smed: dd_Smed_v6_3618_1_2, dd_Smed_v6_3618_1_2, [RH, Score=127, Expect=5e-29]} {RNA1509_2009} {RNA1310_734, RNA1509_2009} {RNA1509_2009, RNA815_608}

Mlig455_060277 {REF} {Length: 7482} {TRANSSPLICED} {Pfam: Dock homology region 2 [PF06920.15, score=104.3]; C2 domain in Dock180 and Zizimin proteins [PF14429.8, score=83.1]; DOCK N-terminus [PF16172.7, score=24.4]} {Human: ENSG00000150760, DOCK1, dedicator of cytokinesis 1, [RH, Score=273, Expect=4e-73]} {Mouse: ENSMUSG00000044447, Dock5, dedicator of cytokinesis 5, [RH, Score=263, Expect=2e-70]; ENSMUSG00000020143, Dock2, dedicator of cyto-kinesis 2, [RH, Score=253, Expect=3e-67]} {Dmel: FBgn0264324, spg, sponge, [RH, Score=170, Expect=8e-42]} {Smed: dd_Smed_v6_3618_1_2, dd_Smed_v6_3618_1_2, [RH, Score=127, Expect=6e-29]} {RNA1509_2009} {RNA1310_734} {RNA815_608}
3. MligTC455_43164 605 12.61 Mlig455_049154, Mlig455_049205

Neo: -

Age: -

Region-enriched R4: 2.209/0.03202

MFSD2A 2.603 - - 0.756 0.895 0.952 -

Mlig455_049154 {REF} {Length: 3876} {Pfam: MFS/sugar transport protein [PF13347.8, score=257.2]; Major Facilitator Superfamily [PF07690.18, score=33.5]} {Human: ENSG00000168389, MFSD2A, major facilitator superfamily domain containing 2A, [Score=218, Expect=3e-63]; ENSG00000205639, MFSD2B, major facilitator superfamily domain containing 2B, [Score=209, Expect=5e-60]} {Mouse: ENSMUSG00000028655, Mfsd2a, major facilitator superfamily domain containing 2A, [Score=216, Expect=1e-62]; ENSMUSG00000037336, Mfsd2b, major facilitator superfamily domain containing 2B, [Score=207, Expect=1e-59]} {Smed: dd_Smed_v6_11210_0_1, dd_Smed_v6_11210_0_1, [Score=275, Expect=1e-84]} {RNA1509_40466} {RNA1310_2075.2} {RNA815_16022}

Mlig455_049205 {REF} {Length: 3844} {Pfam: MFS/sugar transport protein [PF13347.8, score=257.2]; Major Facilitator Superfamily [PF07690.18, score=33.5]} {Human: ENSG00000168389, MFSD2A, major facilitator superfamily domain containing 2A, [Score=218, Expect=3e-63]; ENSG00000205639, MFSD2B, major facilitator superfamily domain containing 2B, [Score=209, Expect=5e-60]} {Mouse: ENSMUSG00000028655, Mfsd2a, major facilitator superfamily domain containing 2A, [Score=216, Expect=1e-62]; ENSMUSG00000037336, Mfsd2b, major facilitator superfamily domain containing 2B, [Score=207, Expect=1e-59]} {Smed: dd_Smed_v6_11210_0_1, dd_Smed_v6_11210_0_1, [Score=275, Expect=7e-85]} {RNA1509_40466, RNA1509_50442, RNA1509_52714, RNA1509_57830} {RNA1310_2075.2, RNA1509_40466, RNA1509_50442, RNA1509_52714, RNA1509_57830} {RNA1509_40466, RNA1509_50442, RNA1509_52714, RNA1509_57830, RNA815_16022}
4. MligTC455_42000 91 1.9 Mlig455_069877

Neo: -

Age: -

ZMIZ1 0.966 - - - - 0.966 - Mlig455_069877 {REF} {Length: 2653} {TRANSSPLICED} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=75.9]} {Human: ENSG00000108175, ZMIZ1, zinc finger MIZ-type containing 1, [Score=243, Expect=1e-69]; ENSG00000122515, ZMIZ2, zinc finger MIZ-type containing 2, [Score=239, Expect=4e-69]} {Mouse: ENSMUSG00000007817, Zmiz1, zinc finger, MIZ-type containing 1, [Score=242, Expect=1e-69]; ENSMUSG00000041164, Zmiz2, zinc finger, MIZ-type containing 2, [Score=239, Expect=4e-69]} {Dmel: FBgn0026160, tna, tonalli, [Score=220, Expect=4e-62]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=66.2, Expect=3e-11]} {Smed: dd_Smed_v6_10016_0_1, dd_Smed_v6_10016_0_1, [Score=114, Expect=8e-27]} {RNA1509_6742} {RNA1310_7051} {RNA815_2879.1}
5. MligTC455_49225 236 4.91 Mlig455_059257

Neo: -

Age: Up-Down-Up

VPS41 0.957 - - - - 0.957 - Mlig455_059257 {REF} {Length: 5244} {Pfam: Region in Clathrin and VPS [PF00637.22, score=59.8]; zinc-RING finger domain [PF14634.8, score=22.0]} {Human: ENSG00000006715, VPS41, VPS41, HOPS complex subunit, [RH, Score=464, Expect=5e-150]} {Mouse: ENSMUSG00000041236, Vps41, VPS41 HOPS complex subunit, [RH, Score=459, Expect=3e-148]} {Dmel: FBgn0002566, lt, light, [RH, Score=401, Expect=2e-126]} {Celegans: WBGene00017974, vps-41, Vacuolar protein sorting-associated protein 41 homolog, [RH, Score=303, Expect=2e-89]} {Smed: dd_Smed_v6_3481_0_1, dd_Smed_v6_3481_0_1, [RH, Score=390, Expect=7e-122]} {RNA1509_34132} {RNA1310_6719} {RNA815_4867}
6. MligTC455_35176 791 16.47 Mlig455_009543, Mlig455_026947, Mlig455_052771, Mlig455_053329, Mlig455_059395, Mlig455_061234, Mlig455_064500

Neo: -

Age: -

0.951 - - - 0.951 - -

Mlig455_009543 {REF} {Length: 5757} {RNA1509_4394} {RNA1310_3634} {RNA815_485.1}

Mlig455_026947 {REF} {Length: 4865} {RNA1509_4394} {RNA1310_3634} {RNA815_485.1}

Mlig455_052771 {REF} {Length: 4865} {RNA1509_4394} {RNA1310_3634} {RNA815_485.1}

Mlig455_053329 {REF} {Length: 2968} {RNA1509_4394} {RNA1310_170} {RNA815_485.1}

Mlig455_059395 {REF} {Length: 4915} {RNA1509_4394} {RNA1310_3634} {RNA815_485.1}

Mlig455_061234 {REF} {Length: 4865} {RNA1509_4394} {RNA1310_3634} {RNA815_485.1}

Mlig455_064500 {REF} {Length: 4865} {RNA1509_4394} {RNA1310_3634} {RNA815_485.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA