TomoSeq data search

Data search

Results for MligTC455_37430

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37430	3770	78.55	Mlig455_062378, Mlig455_062406	Neo: - Age: logFC(26M/2M)=0.390 Region-enriched R5: 1.528/0.00000	VAMP2	Mlig455_062378 {REF} {Length: 931} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=115.0]; Occlusion-derived virus envelope protein ODV-E18 [PF10717.11, score=18.5]} {Human: ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=126, Expect=4e-38]; ENSG00000263620, AC129492.3, novel protein, [Score=125, Expect=9e-38]; ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=122, Expect=1e-36]} {Mouse: ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=126, Expect=3e-38]; ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=124, Expect=2e-37]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [RH, Score=129, Expect=2e-39]} {Celegans: WBGene00004897, snb-1, Synaptobrevin-1, [RH, Score=119, Expect=5e-36]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=145, Expect=5e-46]} {RNA1509_20348} {RNA1310_3113.2, RNA1509_20348} {RNA1509_20348, RNA815_17852.1} Mlig455_062406 {REF} {Length: 877} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=115.0]; Occlusion-derived virus envelope protein ODV-E18 [PF10717.11, score=18.5]} {Human: ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=126, Expect=4e-38]; ENSG00000263620, AC129492.3, novel protein, [Score=125, Expect=9e-38]; ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=122, Expect=1e-36]} {Mouse: ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=126, Expect=3e-38]; ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=124, Expect=2e-37]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [RH, Score=129, Expect=2e-39]} {Celegans: WBGene00004897, snb-1, Synaptobrevin-1, [RH, Score=119, Expect=5e-36]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=145, Expect=5e-46]} {RNA1509_20348} {RNA1310_6978} {RNA815_17852.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37430

3770

78.55

Mlig455_062378, Mlig455_062406

Neo: -

Age: logFC(26M/2M)=0.390

Region-enriched R5: 1.528/0.00000

VAMP2

Mlig455_062378 {REF} {Length: 931} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=115.0]; Occlusion-derived virus envelope protein ODV-E18 [PF10717.11, score=18.5]} {Human: ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=126, Expect=4e-38]; ENSG00000263620, AC129492.3, novel protein, [Score=125, Expect=9e-38]; ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=122, Expect=1e-36]} {Mouse: ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=126, Expect=3e-38]; ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=124, Expect=2e-37]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [RH, Score=129, Expect=2e-39]} {Celegans: WBGene00004897, snb-1, Synaptobrevin-1, [RH, Score=119, Expect=5e-36]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=145, Expect=5e-46]} {RNA1509_20348} {RNA1310_3113.2, RNA1509_20348} {RNA1509_20348, RNA815_17852.1}

Mlig455_062406 {REF} {Length: 877} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=115.0]; Occlusion-derived virus envelope protein ODV-E18 [PF10717.11, score=18.5]} {Human: ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=126, Expect=4e-38]; ENSG00000263620, AC129492.3, novel protein, [Score=125, Expect=9e-38]; ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=122, Expect=1e-36]} {Mouse: ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=126, Expect=3e-38]; ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=124, Expect=2e-37]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [RH, Score=129, Expect=2e-39]} {Celegans: WBGene00004897, snb-1, Synaptobrevin-1, [RH, Score=119, Expect=5e-36]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=145, Expect=5e-46]} {RNA1509_20348} {RNA1310_6978} {RNA815_17852.1}

Cumulative graph for MligTC455_37430

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.732	6.419	0.17457	0.80061
RegionR2	-0.683	6.419	0.01479	0.12827
RegionR3	-0.125	6.419	0.58418	1.00000
RegionR4	0.811	6.419	0.00115	0.01162
RegionR5	1.528	6.419	0.00000	0.00000
RegionR6	0.333	6.419	0.13753	0.66634
RegionR7	-0.367	6.419	0.19075	0.79467
RegionR8	-0.764	6.419	0.03424	0.36323

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.571	6.419	0.40053	1.00000
RegenerationR2	0.093	6.419	0.71961	0.96301
RegenerationR3	0.287	6.419	0.28532	0.71732
RegenerationR4	0.077	6.419	0.77317	0.97777
RegenerationR5	-0.381	6.419	0.12311	0.52492
RegenerationR6	-0.242	6.419	0.36764	0.71066
RegenerationBL	-0.105	6.419	0.72088	1.00000
RegenerationTP	0.655	6.419	0.03582	0.31596

Genes with expression patterns similar to MligTC455_37430

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37430	3770	78.55	Mlig455_062378, Mlig455_062406	Neo: - Age: logFC(26M/2M)=0.390 Region-enriched R5: 1.528/0.00000	VAMP2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_062378 {REF} {Length: 931} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=115.0]; Occlusion-derived virus envelope protein ODV-E18 [PF10717.11, score=18.5]} {Human: ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=126, Expect=4e-38]; ENSG00000263620, AC129492.3, novel protein, [Score=125, Expect=9e-38]; ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=122, Expect=1e-36]} {Mouse: ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=126, Expect=3e-38]; ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=124, Expect=2e-37]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [RH, Score=129, Expect=2e-39]} {Celegans: WBGene00004897, snb-1, Synaptobrevin-1, [RH, Score=119, Expect=5e-36]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=145, Expect=5e-46]} {RNA1509_20348} {RNA1310_3113.2, RNA1509_20348} {RNA1509_20348, RNA815_17852.1} Mlig455_062406 {REF} {Length: 877} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=115.0]; Occlusion-derived virus envelope protein ODV-E18 [PF10717.11, score=18.5]} {Human: ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=126, Expect=4e-38]; ENSG00000263620, AC129492.3, novel protein, [Score=125, Expect=9e-38]; ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=122, Expect=1e-36]} {Mouse: ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=126, Expect=3e-38]; ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=124, Expect=2e-37]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [RH, Score=129, Expect=2e-39]} {Celegans: WBGene00004897, snb-1, Synaptobrevin-1, [RH, Score=119, Expect=5e-36]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=145, Expect=5e-46]} {RNA1509_20348} {RNA1310_6978} {RNA815_17852.1}
2.	MligTC455_28006	2323	48.4	Mlig455_001155	Neo: - Age: Up-Down-Down	SQOR	1.821	-	-	-	0.863	-	0.958	Mlig455_001155 {REF} {Length: 3324} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=70.5]; FAD-NAD(P)-binding [PF13454.8, score=20.3]} {Human: ENSG00000137767, SQOR, sulfide quinone oxidoreductase, [RH, Score=416, Expect=1e-142]} {Mouse: ENSMUSG00000005803, Sqor, sulfide quinone oxidoreductase, [RH, Score=397, Expect=1e-135]} {Dmel: FBgn0035515, CG14997, [RH, Score=387, Expect=1e-131]} {Celegans: WBGene00008538, sqrd-1, Sulfide Quinone oxidoReDuctase, [RH, Score=350, Expect=1e-117]} {Smed: dd_Smed_v6_4215_0_1, dd_Smed_v6_4215_0_1, [RH, Score=440, Expect=6e-153]} {RNA1509_26256, RNA1509_3635} {RNA1310_13654, RNA1509_26256, RNA1509_3635} {RNA1509_26256, RNA1509_3635, RNA815_2609}
3.	MligTC455_44202	781	16.28	Mlig455_025288	Neo: Int S/G2/M Age: logFC(26M/2M)=0.651 Region-enriched R4: 1.041/0.01600	BCKDHA	1.686	-	-	0.730	0.956	-	-	Mlig455_025288 {REF} {Length: 2205} {TRANSSPLICED} {Pfam: Dehydrogenase E1 component [PF00676.22, score=305.3]; 1-deoxy-D-xylulose-5-phosphate synthase [PF13292.8, score=22.4]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.23, score=21.2]} {Human: ENSG00000248098, BCKDHA, branched chain keto acid dehydrogenase E1, alpha polypeptide, [RH, Score=501, Expect=5e-176]; ENSG00000255730, AC011462.1, novel protein, [RH, Score=499, Expect=1e-174]} {Mouse: ENSMUSG00000060376, Bckdha, branched chain ketoacid dehydrogenase E1, alpha polypeptide, [RH, Score=503, Expect=4e-177]} {Dmel: FBgn0037709, CG8199, [RH, Score=458, Expect=9e-160]} {Celegans: WBGene00012713, bckd-1A, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, [RH, Score=481, Expect=6e-169]} {Smed: dd_Smed_v6_3288_0_1, dd_Smed_v6_3288_0_1, [RH, Score=488, Expect=7e-172]} {RNA1509_21323} {RNA1310_8924.1} {RNA815_7812}
4.	MligTC455_43817	5468	113.92	Mlig455_045341	Neo: - Age: logFC(26M/2M)=0.249	KRTCAP2	0.963	-	-	0.963	-	-	-	Mlig455_045341 {REF} {Length: 2594} {TRANSSPLICED} {Pfam: Keratinocyte-associated protein 2 [PF09775.11, score=165.3]} {Human: ENSG00000163463, KRTCAP2, keratinocyte associated protein 2, [RH, Score=118, Expect=3e-34]} {Mouse: ENSMUSG00000042747, Krtcap2, keratinocyte associated protein 2, [RH, Score=115, Expect=2e-33]} {Dmel: FBgn0051460, CG31460, [RH, Score=92.4, Expect=2e-24]} {Smed: dd_Smed_v6_1305_0_1, dd_Smed_v6_1305_0_1, [RH, Score=134, Expect=3e-41]} {RNA1509_20319, RNA1509_2562, RNA1509_26515, RNA1509_38440, RNA1509_48944, RNA1509_5353, RNA1509_8086} {RNA1310_21171.1, RNA1509_20319, RNA1509_2562, RNA1509_26515, RNA1509_38440, RNA1509_48944, RNA1509_5353, RNA1509_8086} {RNA1509_20319, RNA1509_2562, RNA1509_26515, RNA1509_38440, RNA1509_48944, RNA1509_5353, RNA1509_8086, RNA815_14206}
5.	MligTC455_50539	795	16.56	Mlig455_006057	Neo: Int S/G2/M Age: Down-Down-Up Region-enriched R4: 1.810/0.04356		0.963	-	-	-	0.963	-	-	Mlig455_006057 {REF} {Length: 511} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5564) [PF17719.3, score=37.7]} {Mouse: ENSMUSG00000071653, 1810009A15Rik, RIKEN cDNA 1810009A15 gene, [Score=43.5, Expect=4e-06]} {RNA1509_58683, RNA1509_7804} {RNA1310_64510.1, RNA1509_58683, RNA1509_7804} {RNA1509_58683, RNA1509_7804, RNA815_30472}