Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_37454 | 277 | 5.77 | Mlig455_046874 | Neo: - Age: Down-Up-Down |
Mlig455_046874 {REF} {Length: 937} {NoTransDecoderORF} {RNA1509_38163} {RNA1310_23389, RNA1509_38163} {RNA1509_38163, RNA815_26933} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -1.063 | 3.066 | 0.47731 | 1.00000 | |
RegionR2 | 0.375 | 3.066 | 0.54977 | 0.91550 | |
RegionR3 | 0.389 | 3.066 | 0.43528 | 0.95291 | |
RegionR4 | 0.611 | 3.066 | 0.34995 | 0.67156 | |
RegionR5 | -0.169 | 3.066 | 0.75533 | 1.00000 | |
RegionR6 | 0.23 | 3.066 | 0.65980 | 1.00000 | |
RegionR7 | 0.123 | 3.066 | 0.84358 | 1.00000 | |
RegionR8 | -0.495 | 3.066 | 0.51350 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -5.846 | 3.066 | 0.25881 | 0.96822 | |
RegenerationR2 | -1.123 | 3.066 | 0.03820 | 0.32252 | |
RegenerationR3 | -1.183 | 3.066 | 0.05479 | 0.40237 | |
RegenerationR4 | -0.841 | 3.066 | 0.20584 | 0.65228 | |
RegenerationR5 | -0.776 | 3.066 | 0.21037 | 0.64416 | |
RegenerationR6 | -1.362 | 3.066 | 0.03613 | 0.23785 | |
RegenerationBL | -2.441 | 3.066 | 0.01062 | 0.10414 | |
RegenerationTP | -2.319 | 3.066 | 0.01479 | 0.20839 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_37454 | 277 | 5.77 | Mlig455_046874 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046874 {REF} {Length: 937} {NoTransDecoderORF} {RNA1509_38163} {RNA1310_23389, RNA1509_38163} {RNA1509_38163, RNA815_26933} | |
2. | MligTC455_13942 | 192 | 4 | Mlig455_015587 | Neo: - |
SYT14 | 2.51 | - | - | 0.797 | - | 0.758 | 0.955 | Mlig455_015587 {REF} {Length: 3362} {Pfam: C2 domain [PF00168.32, score=38.6]} {Human: ENSG00000143469, SYT14, synaptotagmin 14, [Score=133, Expect=5e-32]; ENSG00000139973, SYT16, synaptotagmin 16, [Score=129, Expect=2e-30]} {Mouse: ENSMUSG00000016200, Syt14, synaptotagmin XIV, [Score=134, Expect=8e-32]} {Dmel: FBgn0261086, Syt14, Synaptotagmin 14, [Score=108, Expect=3e-24]} {Smed: dd_Smed_v6_9548_0_2, dd_Smed_v6_9548_0_2, [Score=136, Expect=2e-34]} {RNA1509_12596} {RNA1310_670.1, RNA1509_12596} {RNA1509_12596, RNA815_7240.1} |
3. | MligTC455_22994 | 337 | 7.02 | Mlig455_008846 | Neo: - Age: Down-Up-Up |
1.794 | - | - | 0.836 | - | - | 0.958 | Mlig455_008846 {REF} {Length: 1548} {Pfam: SPATIAL [PF15256.8, score=72.1]} {Mouse: ENSMUSG00000020096, Tbata, thymus, brain and testes associated, [Score=48.5, Expect=9e-06]} {Smed: dd_Smed_v6_4229_0_1, dd_Smed_v6_4229_0_1, [RH, Score=62.0, Expect=2e-10]} {RNA1509_46671} {RNA1310_22194.1, RNA1509_46671} {RNA1509_46671, RNA815_29404} | |
4. | MligTC455_36885 | 177 | 3.69 | Mlig455_043100 | Neo: - Age: Up-Up-Down |
CASP10 | 1.759 | - | - | - | - | 0.804 | 0.955 | Mlig455_043100 {REF} {Length: 4546} {Pfam: Caspase domain [PF00656.24, score=96.4]} {Human: ENSG00000003400, CASP10, caspase 10, [Score=65.1, Expect=3e-10]} {Mouse: ENSMUSG00000025888, Casp1, caspase 1, [Score=55.1, Expect=3e-07]} {Dmel: FBgn0028381, Decay, Death executioner caspase related to Apopain/Yama, [Score=58.2, Expect=1e-08]} {RNA1509_22461} {RNA1310_3207.1, RNA1509_22461} {RNA1509_22461, RNA815_1110} |
5. | MligTC455_23215 | 289 | 6.03 | Mlig455_058934 | Neo: - Age: - Region-enriched R4: 1.935/0.04312 |
HEXA | 1.733 | - | - | - | - | 0.761 | 0.972 | Mlig455_058934 {REF} {Length: 4161} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 20, catalytic domain [PF00728.24, score=249.1]; Putative carbohydrate binding domain [PF03173.15, score=52.9]} {Human: ENSG00000213614, HEXA, hexosaminidase subunit alpha, [Score=81.3, Expect=4e-15]} {Mouse: ENSMUSG00000025232, Hexa, hexosaminidase A, [Score=82.0, Expect=2e-15]} {Dmel: FBgn0041629, Hexo2, Hexosaminidase 2, [Score=77.8, Expect=2e-14]} {Celegans: WBGene00020509, hex-1, Beta-hexosaminidase A, [Score=63.9, Expect=4e-10]} {Smed: dd_Smed_v6_3964_0_2, dd_Smed_v6_3964_0_2, [Score=105, Expect=5e-23]} {RNA1509_42952} {RNA1310_2171, RNA1509_42952} {RNA1509_42952, RNA815_1707.1} |
6. | MligTC455_29762 | 62 | 1.29 | Mlig455_061431 | Neo: - Age: logFC(26M/2M)=0.670 |
BEST1 | 1.712 | - | - | - | - | 0.757 | 0.955 | Mlig455_061431 {REF} {Length: 4616} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=182.0]} {Human: ENSG00000167995, BEST1, bestrophin 1, [Score=124, Expect=1e-29]; ENSG00000142959, BEST4, bestrophin 4, [Score=124, Expect=3e-30]; ENSG00000127325, BEST3, bestrophin 3, [Score=119, Expect=1e-27]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=143, Expect=2e-36]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=227, Expect=7e-66]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=172, Expect=6e-47]} {Smed: dd_Smed_v6_8073_0_1, dd_Smed_v6_8073_0_1, [Score=354, Expect=2e-117]} {RNA1509_54677} {RNA1310_17634, RNA1509_54677} {RNA1509_54677, RNA815_11997} |
7. | MligTC455_36804 | 4836 | 100.75 | Mlig455_021278 | Neo: - Age: - |
SMDT1 | 1.695 | - | - | - | - | 0.735 | 0.960 | Mlig455_021278 {REF} {Length: 1483} {TRANSSPLICED} {Pfam: Putative mitochondrial precursor protein [PF10161.11, score=62.0]} {Human: ENSG00000272835, SMDT1, single-pass membrane protein with aspartate rich tail 1, [Score=46.6, Expect=2e-07]; ENSG00000183172, SMDT1, single-pass membrane protein with aspartate rich tail 1, [Score=46.6, Expect=2e-07]; ENSG00000274112, SMDT1, single-pass membrane protein with aspartate rich tail 1, [Score=46.6, Expect=2e-07]; ENSG00000272901, SMDT1, single-pass membrane protein with aspartate rich tail 1, [Score=46.6, Expect=2e-07]} {Mouse: ENSMUSG00000022452, Smdt1, single-pass membrane protein with aspartate rich tail 1, [Score=46.6, Expect=1e-07]} {Dmel: FBgn0062440, EMRE, Essential MCU regulator, [Score=51.2, Expect=1e-09]} {Celegans: WBGene00008980, emre-1, Essential MCU regulator, mitochondrial, [Score=48.9, Expect=7e-09]} {Smed: dd_Smed_v6_4158_0_1, dd_Smed_v6_4158_0_1, [Score=70.1, Expect=2e-17]} {RNA1509_31015, RNA1509_5543, RNA1509_9026} {RNA1310_40720, RNA1509_31015, RNA1509_5543, RNA1509_9026} {RNA1509_31015, RNA1509_5543, RNA1509_9026, RNA815_13700.1} |
8. | MligTC455_23368 | 668 | 13.92 | Mlig455_054907, Mlig455_065613 | Neo: - Age: Up-Down-Down Region-enriched R2: 1.477/0.03292 Regeneration-downregulated BL: -6.941 Regeneration-depleted BL: -6.941 |
HYDIN | 1.665 | - | - | - | 0.709 | - | 0.956 | Mlig455_054907 {REF} {Length: 16643} {Pfam: Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=154.0]; Hydin Adenylate kinase-like domain [PF17213.5, score=152.1]; Protein of unknown function (DUF1573) [PF07610.13, score=63.0]; Transmembrane protein 131-like N-terminal [PF12371.10, score=51.1]; MSP (Major sperm protein) domain [PF00635.28, score=50.4]; Flagellar-associated PapD-like [PF14874.8, score=37.3]} {Human: ENSG00000157423, HYDIN, HYDIN, axonemal central pair apparatus protein, [Score=1843, Expect=0.0]; ENSG00000283022, HYDIN, HYDIN, axonemal central pair apparatus protein, [Score=1843, Expect=0.0]} {Mouse: ENSMUSG00000059854, Hydin, HYDIN, axonemal central pair apparatus protein, [Score=1886, Expect=0.0]} {Smed: dd_Smed_v6_7302_1_1, dd_Smed_v6_7302_1_1, [Score=2045, Expect=0.0]} {RNA1509_631} {RNA1310_26.1} {RNA815_190} Mlig455_065613 {REF} {Length: 16716} {Pfam: Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=160.6]; Hydin Adenylate kinase-like domain [PF17213.5, score=152.7]; Protein of unknown function (DUF1573) [PF07610.13, score=62.9]; MSP (Major sperm protein) domain [PF00635.28, score=50.6]; Transmembrane protein 131-like N-terminal [PF12371.10, score=50.4]; Flagellar-associated PapD-like [PF14874.8, score=37.6]; Ig-like domain [PF16392.7, score=20.8]} {Human: ENSG00000157423, HYDIN, HYDIN, axonemal central pair apparatus protein, [RH, Score=1952, Expect=0.0]; ENSG00000283022, HYDIN, HYDIN, axonemal central pair apparatus protein, [RH, Score=1952, Expect=0.0]} {Mouse: ENSMUSG00000059854, Hydin, HYDIN, axonemal central pair apparatus protein, [RH, Score=2003, Expect=0.0]} {Smed: dd_Smed_v6_7302_1_1, dd_Smed_v6_7302_1_1, [RH, Score=2169, Expect=0.0]} {RNA1509_631} {RNA1310_26.1} {RNA815_190} |
9. | MligTC455_49386 | 207 | 4.31 | Mlig455_066366 | Neo: - Age: Up-Down-Up |
0.985 | - | - | - | - | - | 0.985 | Mlig455_066366 {REF} {Length: 972} {NoTransDecoderORF} {RNA1509_50868} {RNA1310_62010} {RNA815_31936} | |
10. | MligTC455_45685 | 182 | 3.8 | Mlig455_014783 | Neo: Irradiation Age: Up-Up-Down |
ATP13A3 | 0.983 | - | - | - | - | - | 0.983 | Mlig455_014783 {REF} {Length: 5032} {TRANSSPLICED} {Pfam: E1-E2 ATPase [PF00122.22, score=122.2]; P5-type ATPase cation transporter [PF12409.10, score=80.2]; haloacid dehalogenase-like hydrolase [PF00702.28, score=57.3]; Cation transporter/ATPase, N-terminus [PF00690.28, score=24.2]} {Human: ENSG00000133657, ATP13A3, ATPase 13A3, [Score=804, Expect=0.0]; ENSG00000159363, ATP13A2, ATPase cation transporting 13A2, [Score=777, Expect=0.0]} {Mouse: ENSMUSG00000022533, Atp13a3, ATPase type 13A3, [Score=808, Expect=0.0]; ENSMUSG00000036622, Atp13a2, ATPase type 13A2, [Score=769, Expect=0.0]} {Dmel: FBgn0052000, CG32000, [Score=582, Expect=0.0]} {Celegans: WBGene00012341, catp-6, Probable cation-transporting ATPase W08D2.5, [Score=760, Expect=0.0]} {Smed: dd_Smed_v6_1640_0_1, dd_Smed_v6_1640_0_1, [Score=1018, Expect=0.0]} {RNA1509_8032} {RNA1310_2098.1, RNA1509_8032} {RNA1509_8032, RNA815_3619.1} |
11. | MligTC455_20245 | 157 | 3.28 | Mlig455_006366, Mlig455_006411 | Neo: - Age: Down-Down-Up |
0.974 | - | - | - | - | - | 0.974 | Mlig455_006366 {REF} {Length: 142} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36220} {RNA1310_70757.2} {RNA815_57106} Mlig455_006411 {REF} {Length: 394} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36220} {RNA1310_70757.1, RNA1509_36220} {RNA1509_36220, RNA815_57106} |
|
12. | MligTC455_23216 | 287 | 5.98 | Mlig455_058939 | Neo: - Age: - Region-enriched R4: 2.172/0.02122 |
HEXA | 0.974 | - | - | - | - | - | 0.974 | Mlig455_058939 {REF} {Length: 3816} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 20, catalytic domain [PF00728.24, score=247.3]; Putative carbohydrate binding domain [PF03173.15, score=27.3]} {Human: ENSG00000213614, HEXA, hexosaminidase subunit alpha, [Score=77.4, Expect=5e-14]} {Mouse: ENSMUSG00000025232, Hexa, hexosaminidase A, [Score=79.3, Expect=9e-15]} {Dmel: FBgn0041629, Hexo2, Hexosaminidase 2, [Score=77.0, Expect=4e-14]} {Celegans: WBGene00020509, hex-1, Beta-hexosaminidase A, [Score=64.3, Expect=3e-10]} {Smed: dd_Smed_v6_3964_0_2, dd_Smed_v6_3964_0_2, [Score=103, Expect=2e-22]} {RNA1509_42952} {RNA1310_2171} {RNA815_1707.1} |
13. | MligTC455_26029 | 895 | 18.65 | Mlig455_047971 | Neo: - Age: - Region-enriched R4: 1.920/0.01824 |
COQ9 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_047971 {REF} {Length: 939} {TRANSSPLICED} {Pfam: COQ9 [PF08511.13, score=91.8]} {Human: ENSG00000088682, COQ9, coenzyme Q9, [RH, Score=122, Expect=1e-32]} {Mouse: ENSMUSG00000031782, Coq9, coenzyme Q9, [RH, Score=119, Expect=5e-32]} {Dmel: FBgn0050493, CG30493, [RH, Score=132, Expect=6e-37]} {Smed: dd_Smed_v6_4927_0_1, dd_Smed_v6_4927_0_1, [RH, Score=117, Expect=8e-32]} {RNA1509_11041} {RNA1310_32994} {RNA815_19703} |
14. | MligTC455_48786 | 2725 | 56.78 | Mlig455_048422, Mlig455_048564 | Neo: - Age: Down-Up-Up Region-enriched R7: 1.086/0.03239 |
0.962 | - | - | - | - | - | 0.962 | Mlig455_048422 {REF} {Length: 1894} {Pfam: Seven in absentia protein family [PF03145.18, score=25.4]} {RNA1509_15747} {RNA1310_15112.1} {RNA815_6351.1} Mlig455_048564 {REF} {Length: 1894} {Pfam: Seven in absentia protein family [PF03145.18, score=25.4]} {RNA1509_15747, RNA1509_33964, RNA1509_59414} {RNA1310_15112.1, RNA1509_15747, RNA1509_33964, RNA1509_59414} {RNA1509_15747, RNA1509_33964, RNA1509_59414, RNA815_6351.1} |
|
15. | MligTC455_43787 | 37 | 0.77 | Mlig455_054406 | Neo: - |
CCDC60 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_054406 {REF} {Length: 3056} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4698) [PF15769.7, score=170.4]} {Human: ENSG00000183273, CCDC60, coiled-coil domain containing 60, [Score=62.8, Expect=2e-09]} {Mouse: ENSMUSG00000043913, Ccdc60, coiled-coil domain containing 60, [Score=65.5, Expect=1e-10]} {Smed: dd_Smed_v6_14286_0_1, dd_Smed_v6_14286_0_1, [Score=115, Expect=2e-26]} {RNA1509_58886} {RNA1310_1558.2} {RNA815_11153} |
16. | MligTC455_53175 | 150 | 3.12 | Mlig455_024313, Mlig455_024369 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_024313 {REF} {Length: 800} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=59.2]} {Dmel: FBgn0013467, igl, igloo, [Score=66.6, Expect=6e-12]} {Smed: dd_Smed_v6_4783_0_67, dd_Smed_v6_4783_0_67, [Score=75.1, Expect=3e-14]} {RNA1310_37981} Mlig455_024369 {REF} {Length: 562} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=59.2]} {Dmel: FBgn0013467, igl, igloo, [Score=66.6, Expect=6e-12]} {Smed: dd_Smed_v6_4783_0_67, dd_Smed_v6_4783_0_67, [Score=75.1, Expect=3e-14]} {RNA1310_37981} |
|
17. | MligTC455_37384 | 166 | 3.47 | Mlig455_030537 | Neo: - Age: Down-Up-Up |
APCDD1 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_030537 {REF} {Length: 1885} {Pfam: Adenomatosis polyposis coli down-regulated 1 [PF14921.8, score=207.7]} {Human: ENSG00000154856, APCDD1, APC down-regulated 1, [RH, Score=232, Expect=8e-69]} {Mouse: ENSMUSG00000071847, Apcdd1, adenomatosis polyposis coli down-regulated 1, [RH, Score=228, Expect=2e-67]} {RNA1509_38294} {RNA1310_16871} {RNA815_39513} |
18. | MligTC455_18721 | 85 | 1.77 | Mlig455_044140 | Neo: - Age: - |
ANKUB1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_044140 {REF} {Length: 2661} {Pfam: Ubiquitin family [PF00240.25, score=36.3]} {Human: ENSG00000206199, ANKUB1, ankyrin repeat and ubiquitin domain containing 1, [RH, Score=258, Expect=2e-77]} {Mouse: ENSMUSG00000074591, Ankub1, ankrin repeat and ubiquitin domain containing 1, [RH, Score=258, Expect=5e-78]} {Smed: dd_Smed_v6_9027_0_1, dd_Smed_v6_9027_0_1, [RH, Score=510, Expect=2e-174]} {RNA1509_23349} {RNA1310_10366.1} {RNA815_3711.1} |
19. | MligTC455_25372 | 189 | 3.93 | Mlig455_014810, Mlig455_048359 | Neo: - Age: - |
NCAM2 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_014810 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=37.5]; Immunoglobulin domain [PF13895.8, score=33.5]; Immunoglobulin I-set domain [PF07679.18, score=29.1]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=56.6, Expect=3e-08]} {RNA1509_40266} {RNA1310_23286} {RNA815_17849} Mlig455_048359 {REF} {Length: 4017} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=101.4]; Immunoglobulin I-set domain [PF07679.18, score=80.3]; Immunoglobulin domain [PF13895.8, score=72.0]; Fibronectin type III domain [PF00041.23, score=63.2]; Immunoglobulin domain [PF00047.27, score=50.4]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=42.8]; Immunoglobulin V-set domain [PF07686.19, score=28.2]} {Human: ENSG00000154654, NCAM2, neural cell adhesion molecule 2, [RH, Score=142, Expect=4e-34]} {Mouse: ENSMUSG00000022762, Ncam2, neural cell adhesion molecule 2, [Score=137, Expect=8e-33]} {Dmel: FBgn0000635, Fas2, Fasciclin 2, [RH, Score=130, Expect=8e-31]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=70.9, Expect=3e-12]} {Smed: dd_Smed_v6_9674_0_1, dd_Smed_v6_9674_0_1, [Score=163, Expect=1e-41]} {RNA1509_40266} {RNA1310_7040, RNA1509_40266} {RNA1509_40266, RNA815_17849} |
20. | MligTC455_47002 | 25 | 0.53 | Mlig455_054968 | Neo: - Age: logFC(26M/2M)=0.489 Region-enriched R4: 7.313/0.01920 |
RPL4 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_054968 {REF} {Length: 1332} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=141.4]; 60S ribosomal protein L4 C-terminal domain [PF14374.8, score=78.8]} {Human: ENSG00000174444, RPL4, ribosomal protein L4, [RH, Score=437, Expect=2e-152]} {Mouse: ENSMUSG00000032399, Rpl4, ribosomal protein L4, [RH, Score=437, Expect=7e-153]} {Dmel: FBgn0003279, RpL4, Ribosomal protein L4, [RH, Score=422, Expect=2e-147]} {Celegans: WBGene00004415, rpl-4, 60S ribosomal protein L4, [RH, Score=395, Expect=2e-137]} {Smed: dd_Smed_v6_211_0_1, dd_Smed_v6_211_0_1, [RH, Score=391, Expect=6e-136]} {RNA1509_548, RNA1509_58918} {RNA1310_26790, RNA1509_58918} {RNA1509_58918, RNA815_10660} |
21. | MligTC455_24378 | 515 | 10.72 | Mlig455_003533, Mlig455_015528 | Neo: - Age: Up-Down-Down |
0.951 | - | - | - | - | 0.951 | - | Mlig455_003533 {REF} {Length: 8827} {Pfam: Vacuolar sorting-associated protein 13, N-terminal [PF16908.7, score=24.8]} {RNA1509_7411} {RNA1310_661.1} {RNA815_2109} Mlig455_015528 {REF} {Length: 9022} {Pfam: Vacuolar sorting-associated protein 13, N-terminal [PF16908.7, score=27.0]} {RNA1509_7411} {RNA1310_661.1} {RNA815_2109} |