TomoSeq data search

Data search

Results for MligTC455_37463

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37463

1643

34.23

Mlig455_048461

Neo: -

Age: -

SLC8A2

Mlig455_048461 {REF} {Length: 4009} {Pfam: Calx-beta domain [PF03160.16, score=184.1]; C-terminal extension of sodium/calcium exchanger domain [PF16494.7, score=95.9]; Sodium/calcium exchanger protein [PF01699.26, score=79.0]} {Human: ENSG00000118160, SLC8A2, solute carrier family 8 member A2, [RH, Score=613, Expect=0.0]} {Mouse: ENSMUSG00000030376, Slc8a2, solute carrier family 8 (sodium/calcium exchanger), member 2, [Score=637, Expect=0.0]; ENSMUSG00000054640, Slc8a1, solute carrier family 8 (sodium/calcium exchanger), member 1, [Score=634, Expect=0.0]; ENSMUSG00000079055, Slc8a3, solute carrier family 8 (sodium/calcium exchanger), member 3, [Score=630, Expect=0.0]} {Dmel: FBgn0013995, Calx, Na/Ca-exchange protein, [Score=539, Expect=0.0]} {Celegans: WBGene00003567, ncx-2, Na/Ca eXchangers, [Score=613, Expect=0.0]} {Smed: dd_Smed_v6_3303_0_1, dd_Smed_v6_3303_0_1, [Score=736, Expect=0.0]} {RNA1509_5654} {RNA1310_1581.1} {RNA815_428.1}

Cumulative graph for MligTC455_37463

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.688	5.259	0.32722	0.97489
RegionR2	-0.388	5.259	0.22049	0.58923
RegionR3	-0.472	5.259	0.08711	0.52192
RegionR4	0.265	5.259	0.45537	0.78382
RegionR5	-1.07	5.259	0.00019	0.00277
RegionR6	0.157	5.259	0.55413	1.00000
RegionR7	0.693	5.259	0.02554	0.29951
RegionR8	0.127	5.259	0.76831	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-9.094	5.259	0.00136	0.19891
RegenerationR2	-0.065	5.259	0.82176	0.99544
RegenerationR3	0.127	5.259	0.69450	0.94572
RegenerationR4	-0.294	5.259	0.39211	0.80842
RegenerationR5	0.676	5.259	0.03797	0.32247
RegenerationR6	-0.278	5.259	0.38127	0.72229
RegenerationBL	-0.38	5.259	0.27053	0.63000
RegenerationTP	-0.355	5.259	0.33856	0.78216

Genes with expression patterns similar to MligTC455_37463

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37463	1643	34.23	Mlig455_048461	Neo: - Age: -	SLC8A2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_048461 {REF} {Length: 4009} {Pfam: Calx-beta domain [PF03160.16, score=184.1]; C-terminal extension of sodium/calcium exchanger domain [PF16494.7, score=95.9]; Sodium/calcium exchanger protein [PF01699.26, score=79.0]} {Human: ENSG00000118160, SLC8A2, solute carrier family 8 member A2, [RH, Score=613, Expect=0.0]} {Mouse: ENSMUSG00000030376, Slc8a2, solute carrier family 8 (sodium/calcium exchanger), member 2, [Score=637, Expect=0.0]; ENSMUSG00000054640, Slc8a1, solute carrier family 8 (sodium/calcium exchanger), member 1, [Score=634, Expect=0.0]; ENSMUSG00000079055, Slc8a3, solute carrier family 8 (sodium/calcium exchanger), member 3, [Score=630, Expect=0.0]} {Dmel: FBgn0013995, Calx, Na/Ca-exchange protein, [Score=539, Expect=0.0]} {Celegans: WBGene00003567, ncx-2, Na/Ca eXchangers, [Score=613, Expect=0.0]} {Smed: dd_Smed_v6_3303_0_1, dd_Smed_v6_3303_0_1, [Score=736, Expect=0.0]} {RNA1509_5654} {RNA1310_1581.1} {RNA815_428.1}
2.	MligTC455_37464	1693	35.26	Mlig455_062714	Neo: - Age: -	SLC8A3	5.976	0.998	0.997	0.999	0.992	0.991	0.999	Mlig455_062714 {REF} {Length: 5180} {Pfam: Calx-beta domain [PF03160.16, score=183.3]; Sodium/calcium exchanger protein [PF01699.26, score=176.0]; C-terminal extension of sodium/calcium exchanger domain [PF16494.7, score=97.2]} {Human: ENSG00000100678, SLC8A3, solute carrier family 8 member A3, [RH, Score=935, Expect=0.0]; ENSG00000183023, SLC8A1, solute carrier family 8 member A1, [RH, Score=922, Expect=0.0]; ENSG00000118160, SLC8A2, solute carrier family 8 member A2, [RH, Score=912, Expect=0.0]} {Mouse: ENSMUSG00000030376, Slc8a2, solute carrier family 8 (sodium/calcium exchanger), member 2, [RH, Score=935, Expect=0.0]; ENSMUSG00000079055, Slc8a3, solute carrier family 8 (sodium/calcium exchanger), member 3, [RH, Score=932, Expect=0.0]; ENSMUSG00000054640, Slc8a1, solute carrier family 8 (sodium/calcium exchanger), member 1, [RH, Score=928, Expect=0.0]} {Dmel: FBgn0013995, Calx, Na/Ca-exchange protein, [RH, Score=831, Expect=0.0]} {Celegans: WBGene00003567, ncx-2, Na/Ca eXchangers, [RH, Score=886, Expect=0.0]} {Smed: dd_Smed_v6_3303_0_1, dd_Smed_v6_3303_0_1, [RH, Score=1058, Expect=0.0]} {RNA1509_5654} {RNA1310_1581.1, RNA1509_5654} {RNA1509_5654, RNA815_428.1}
3.	MligTC455_18338	5068	105.58	Mlig455_005074, Mlig455_005240	Neo: - Age: -		2.63	-	-	-	0.844	0.834	0.952	Mlig455_005074 {REF} {Length: 923} {TRANSSPLICED} {RNA1509_33176} {RNA1310_36506} {RNA815_18681} Mlig455_005240 {REF} {Length: 1585} {RNA1509_18318, RNA1509_29309, RNA1509_33176, RNA1509_47412} {RNA1310_36506, RNA1509_18318, RNA1509_29309, RNA1509_33176, RNA1509_47412} {RNA1509_18318, RNA1509_29309, RNA1509_33176, RNA1509_47412, RNA815_18681}
4.	MligTC455_45182	1838	38.29	Mlig455_016689	Neo: - Age: -	GNAO1	1.818	-	-	-	-	0.859	0.959	Mlig455_016689 {REF} {Length: 2862} {TRANSSPLICED} {Pfam: G-protein alpha subunit [PF00503.22, score=408.8]; ADP-ribosylation factor family [PF00025.23, score=62.5]; Gtr1/RagA G protein conserved region [PF04670.14, score=24.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=20.3]} {Human: ENSG00000087258, GNAO1, G protein subunit alpha o1, [RH, Score=619, Expect=0.0]} {Mouse: ENSMUSG00000031748, Gnao1, guanine nucleotide binding protein, alpha O, [RH, Score=612, Expect=0.0]} {Dmel: FBgn0001122, Galphao, G protein alpha o subunit, [RH, Score=649, Expect=0.0]} {Celegans: WBGene00001648, goa-1, Guanine nucleotide-binding protein G(o) subunit alpha, [RH, Score=648, Expect=0.0]} {Smed: dd_Smed_v6_1656_0_3, dd_Smed_v6_1656_0_3, [RH, Score=671, Expect=0.0]} {RNA1509_44439, RNA1509_48026, RNA1509_9073} {RNA1310_26362, RNA1509_44439, RNA1509_48026, RNA1509_9073} {RNA1509_44439, RNA1509_48026, RNA1509_9073, RNA815_15072}
5.	MligTC455_20605	430	8.96	Mlig455_005619	Neo: - Age: -		0.966	-	-	-	-	-	0.966	Mlig455_005619 {REF} {Length: 103} {NoTransDecoderORF} {RNA1509_31745} {RNA1310_18428.2} {RNA815_18336}
6.	MligTC455_22603	882	18.38	Mlig455_035234, Mlig455_035278	Neo: - Age: -	IQCJ-SCHIP1	0.959	-	-	-	-	0.959	-	Mlig455_035234 {REF} {Length: 3410} {Pfam: Schwannomin-interacting protein 1 [PF10148.11, score=135.0]} {Human: ENSG00000283154, IQCJ-SCHIP1, IQCJ-SCHIP1 readthrough, [Score=112, Expect=1e-25]; ENSG00000151967, SCHIP1, schwannomin interacting protein 1, [Score=111, Expect=1e-26]} {Mouse: ENSMUSG00000027777, Schip1, schwannomin interacting protein 1, [Score=113, Expect=4e-26]; ENSMUSG00000102422, Iqschfp, Iqcj and Schip1 fusion protein, [Score=112, Expect=2e-25]} {Celegans: WBGene00018074, F35H12.1, [Score=48.5, Expect=1e-05]} {RNA1509_12622} {RNA1310_5529, RNA1509_12622} {RNA1509_12622, RNA815_5546} Mlig455_035278 {REF} {Length: 3557} {Pfam: Schwannomin-interacting protein 1 [PF10148.11, score=137.9]} {Human: ENSG00000283154, IQCJ-SCHIP1, IQCJ-SCHIP1 readthrough, [Score=115, Expect=2e-26]; ENSG00000151967, SCHIP1, schwannomin interacting protein 1, [Score=113, Expect=2e-27]} {Mouse: ENSMUSG00000027777, Schip1, schwannomin interacting protein 1, [Score=115, Expect=7e-27]; ENSMUSG00000102422, Iqschfp, Iqcj and Schip1 fusion protein, [Score=114, Expect=4e-26]} {Celegans: WBGene00018074, F35H12.1, [Score=48.9, Expect=1e-05]} {RNA1509_12622} {RNA1310_5529} {RNA815_5546}
7.	MligTC455_27582	587	12.23	Mlig455_020527	Neo: - Age: -		0.958	-	-	-	0.958	-	-	Mlig455_020527 {REF} {Length: 1858} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1772) [PF08592.13, score=19.9]} {RNA1509_48081} {RNA1310_6782.1, RNA1509_48081} {RNA1509_48081, RNA815_4292}
8.	MligTC455_27840	1247	25.98	Mlig455_029797	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_029797 {REF} {Length: 5590} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_11456, RNA1509_21319, RNA1509_24163} {RNA1310_131.1, RNA1509_11456, RNA1509_21319} {RNA1509_11456, RNA1509_21319, RNA815_52.1}

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