TomoSeq data search

Data search

Results for MligTC455_37472

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37472	656	13.67	Mlig455_018792, Mlig455_048143	Neo: Germline Age: Up-Down-Down	RBBP6	Mlig455_018792 {REF} {Length: 5543} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=54.2]; Zinc knuckle [PF13696.8, score=24.8]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=119, Expect=3e-29]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=134, Expect=9e-32]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=84.3, Expect=9e-17]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=109, Expect=3e-24]} {Smed: dd_Smed_v6_3780_0_1, dd_Smed_v6_3780_0_1, [Score=193, Expect=6e-55]} {RNA1509_11989} {RNA1310_9842.1} {RNA815_16729.1} Mlig455_048143 {REF} {Length: 5542} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=54.1]; Zinc knuckle [PF13696.8, score=24.7]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=120, Expect=3e-29]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=133, Expect=2e-31]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=84.0, Expect=1e-16]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=110, Expect=2e-24]} {Smed: dd_Smed_v6_3780_0_1, dd_Smed_v6_3780_0_1, [Score=194, Expect=7e-55]} {RNA1509_11989, RNA1509_20863, RNA1509_33531} {RNA1310_9842.1, RNA1509_20863, RNA1509_33531} {RNA1509_20863, RNA1509_33531, RNA815_16729.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37472

656

13.67

Mlig455_018792, Mlig455_048143

Neo: Germline

Age: Up-Down-Down

RBBP6

Mlig455_018792 {REF} {Length: 5543} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=54.2]; Zinc knuckle [PF13696.8, score=24.8]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=119, Expect=3e-29]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=134, Expect=9e-32]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=84.3, Expect=9e-17]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=109, Expect=3e-24]} {Smed: dd_Smed_v6_3780_0_1, dd_Smed_v6_3780_0_1, [Score=193, Expect=6e-55]} {RNA1509_11989} {RNA1310_9842.1} {RNA815_16729.1}

Mlig455_048143 {REF} {Length: 5542} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=54.1]; Zinc knuckle [PF13696.8, score=24.7]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=120, Expect=3e-29]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=133, Expect=2e-31]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=84.0, Expect=1e-16]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=110, Expect=2e-24]} {Smed: dd_Smed_v6_3780_0_1, dd_Smed_v6_3780_0_1, [Score=194, Expect=7e-55]} {RNA1509_11989, RNA1509_20863, RNA1509_33531} {RNA1310_9842.1, RNA1509_20863, RNA1509_33531} {RNA1509_20863, RNA1509_33531, RNA815_16729.1}

Cumulative graph for MligTC455_37472

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.118	4.146	0.91795	1.00000
RegionR2	-0.232	4.146	0.69426	1.00000
RegionR3	-0.763	4.146	0.11137	0.58106
RegionR4	1.147	4.146	0.02986	0.13553
RegionR5	0.076	4.146	0.85756	1.00000
RegionR6	-0.362	4.146	0.43427	0.99584
RegionR7	0.788	4.146	0.10570	0.61783
RegionR8	-0.536	4.146	0.44111	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.103	4.146	0.57861	1.00000
RegenerationR2	0.116	4.146	0.82152	0.99544
RegenerationR3	0.27	4.146	0.64979	0.92890
RegenerationR4	-1.122	4.146	0.04497	0.34217
RegenerationR5	-0.454	4.146	0.38479	0.78896
RegenerationR6	-0.777	4.146	0.19385	0.53301
RegenerationBL	-0.364	4.146	0.57807	0.93061
RegenerationTP	-0.12	4.146	0.85563	1.00000

Genes with expression patterns similar to MligTC455_37472

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37472	656	13.67	Mlig455_018792, Mlig455_048143	Neo: Germline Age: Up-Down-Down	RBBP6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018792 {REF} {Length: 5543} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=54.2]; Zinc knuckle [PF13696.8, score=24.8]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=119, Expect=3e-29]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=134, Expect=9e-32]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=84.3, Expect=9e-17]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=109, Expect=3e-24]} {Smed: dd_Smed_v6_3780_0_1, dd_Smed_v6_3780_0_1, [Score=193, Expect=6e-55]} {RNA1509_11989} {RNA1310_9842.1} {RNA815_16729.1} Mlig455_048143 {REF} {Length: 5542} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=54.1]; Zinc knuckle [PF13696.8, score=24.7]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=120, Expect=3e-29]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=133, Expect=2e-31]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=84.0, Expect=1e-16]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=110, Expect=2e-24]} {Smed: dd_Smed_v6_3780_0_1, dd_Smed_v6_3780_0_1, [Score=194, Expect=7e-55]} {RNA1509_11989, RNA1509_20863, RNA1509_33531} {RNA1310_9842.1, RNA1509_20863, RNA1509_33531} {RNA1509_20863, RNA1509_33531, RNA815_16729.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts