M. lignano Tomo-Seq
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Results for MligTC455_37534

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37534 117 2.43 Mlig455_027112

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.815

 Mlig455_027112 {REF} {Length: 2377} {Pfam: Major Facilitator Superfamily [PF07690.18, score=59.7]} {Dmel: FBgn0085446, CG34417, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_8794_0_1, dd_Smed_v6_8794_0_1, [RH, Score=155, Expect=6e-41]} {RNA1310_9295} {RNA815_41444}

Cumulative graph for MligTC455_37534

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.917 2.121 0.63266 1.00000
RegionR2 0.492 2.121 0.64140 0.97889
RegionR3 2.073 2.121 0.01211 0.17367
RegionR4 0.684 2.121 0.49297 0.81959
RegionR5 1.247 2.121 0.15034 0.40360
RegionR6 0.17 2.121 0.85582 1.00000
RegionR7 -2.244 2.121 0.36876 1.00000
RegionR8 -0.505 2.121 0.84958 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.551 2.121 0.75298 1.00000
RegenerationR2 1.442 2.121 0.01877 0.22500
RegenerationR3 -0.108 2.121 0.85444 0.99929
RegenerationR4 0.884 2.121 0.25019 0.69872
RegenerationR5 0.852 2.121 0.18685 0.61744
RegenerationR6 1.497 2.121 0.08657 0.36806
RegenerationBL 2.092 2.121 0.10242 0.37728
RegenerationTP 3.423 2.121 0.01704 0.22356


Genes with expression patterns similar to MligTC455_37534

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37534 117 2.43 Mlig455_027112

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.815

 5 - 1.000 1.000 1.000 1.000 1.000 Mlig455_027112 {REF} {Length: 2377} {Pfam: Major Facilitator Superfamily [PF07690.18, score=59.7]} {Dmel: FBgn0085446, CG34417, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_8794_0_1, dd_Smed_v6_8794_0_1, [RH, Score=155, Expect=6e-41]} {RNA1310_9295} {RNA815_41444}
2. MligTC455_01791 37 0.78 Mlig455_005666

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_005666 {REF} {Length: 933} {Pfam: Cell division protein ZapB [PF06005.14, score=21.1]}
3. MligTC455_30132 49 1.02 Mlig455_065340

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.595

 0.954 - - - - - 0.954 Mlig455_065340 {REF} {Length: 1453} {NoTransDecoderORF} {RNA1509_14197} {RNA1310_29108.1} {RNA815_3035.1}
4. MligTC455_15990 53 1.1 Mlig455_053183

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_053183 {REF} {Length: 1875} {RNA1310_81425}
5. MligTC455_37013 102 2.12 Mlig455_028784

Neo: -

Age: -

 RPA1 0.953 - - - - 0.953 - Mlig455_028784 {REF} {Length: 4559} {Pfam: Replication protein A OB domain [PF16900.7, score=62.3]; OB-fold nucleic acid binding domain [PF01336.27, score=43.1]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=92.4, Expect=7e-20]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=86.3, Expect=5e-18]} {RNA1509_12100} {RNA1310_68428} {RNA815_14259}
6. MligTC455_37533 89 1.86 Mlig455_026964, Mlig455_027050

Neo: -

Age: Down-Down-Up

 0.95 - 0.950 - - - -

Mlig455_026964 {REF} {Length: 848} {NoTransDecoderORF} {RNA1310_9295} {RNA815_34424}

Mlig455_027050 {REF} {Length: 2426} {Pfam: Major Facilitator Superfamily [PF07690.18, score=56.6]} {Smed: dd_Smed_v6_8794_0_1, dd_Smed_v6_8794_0_1, [Score=160, Expect=2e-43]} {RNA1310_9295} {RNA815_41444}

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