TomoSeq data search

Data search

Results for MligTC455_37595

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37595

29

0.61

Mlig455_031808

Neo: -

Age: -

Mlig455_031808 {REF} {Length: 1138} {TRANSSPLICED} {Pfam: U11-48K-like CHHC zinc finger [PF05253.14, score=41.5]} {RNA1509_38961} {RNA1310_34482.1, RNA1509_38961} {RNA1509_38961, RNA815_10030}

Cumulative graph for MligTC455_37595

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.108	0.949	0.99997	1.00000
RegionR2	-0.965	0.949	0.99991	1.00000
RegionR3	-0.336	0.949	0.99996	1.00000
RegionR4	0.985	0.949	1.00000	1.00000
RegionR5	-0.011	0.949	0.99998	1.00000
RegionR6	-0.337	0.949	0.99999	1.00000
RegionR7	-0.254	0.949	1.00000	1.00000
RegionR8	-0.191	0.949	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.588	0.949	0.99999	1.00000
RegenerationR2	3.175	0.949	0.03163	0.29190
RegenerationR3	3.321	0.949	0.08570	0.47684
RegenerationR4	3.08	0.949	0.07386	0.43200
RegenerationR5	3.655	0.949	0.02221	0.25701
RegenerationR6	4.342	0.949	0.02875	0.21141
RegenerationBL	4.395	0.949	0.03510	0.21093
RegenerationTP	-0.433	0.949	0.99997	1.00000

Genes with expression patterns similar to MligTC455_37595

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37595	29	0.61	Mlig455_031808	Neo: - Age: -		3	-	-	-	1.000	1.000	1.000	Mlig455_031808 {REF} {Length: 1138} {TRANSSPLICED} {Pfam: U11-48K-like CHHC zinc finger [PF05253.14, score=41.5]} {RNA1509_38961} {RNA1310_34482.1, RNA1509_38961} {RNA1509_38961, RNA815_10030}
2.	MligTC455_26598	46	0.96	Mlig455_066641	Neo: - Age: -	ANKRD50	1.682	-	-	-	-	0.716	0.966	Mlig455_066641 {REF} {Length: 4607} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=96.1]; Ankyrin repeats (many copies) [PF13637.8, score=72.0]; Ankyrin repeats (many copies) [PF13857.8, score=66.3]; Ankyrin repeat [PF13606.8, score=50.3]; Ankyrin repeat [PF00023.32, score=43.4]; Mab-21 protein [PF03281.16, score=38.4]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=102, Expect=4e-21]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=108, Expect=4e-23]} {Dmel: FBgn0039590, CG10011, [Score=79.7, Expect=2e-14]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=66.2, Expect=1e-10]} {Smed: dd_Smed_v6_2072_0_8, dd_Smed_v6_2072_0_8, [Score=67.0, Expect=6e-11]} {RNA1509_17743} {RNA1310_2089, RNA1509_17743} {RNA1509_17743, RNA815_1048}
3.	MligTC455_04275	22	0.45	Mlig455_016313, Mlig455_042891	Neo: - Age: -		0.975	-	-	-	-	0.975	-	Mlig455_016313 {REF} {Length: 554} {TRANSSPLICED} {RNA1509_33750} {RNA1310_18634} {RNA815_20382} Mlig455_042891 {REF} {Length: 554} {TRANSSPLICED} {RNA1509_33750} {RNA1310_18634} {RNA815_20382}
4.	MligTC455_33684	86	1.8	Mlig455_001965, Mlig455_035651	Neo: - Age: -		0.967	-	-	-	-	-	0.967	Mlig455_001965 {REF} {Length: 397} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_78911} {RNA815_47584} Mlig455_035651 {REF} {Length: 2131} {NoTransDecoderORF} {RNA1509_44737} {RNA1310_54013.1} {RNA815_47584}
5.	MligTC455_23624	41	0.84	Mlig455_046320, Mlig455_068219	Neo: - Age: -	CFAP97D1	0.96	-	-	-	0.960	-	-	Mlig455_046320 {REF} {Length: 3594} {Pfam: Hemingway/CFA97 [PF13879.8, score=47.1]} {Human: ENSG00000231256, CFAP97D1, CFAP97 domain containing 1, [Score=47.8, Expect=1e-06]} {Mouse: ENSMUSG00000010841, Cfap97d1, CFAP97 domain containing 1, [Score=54.3, Expect=2e-09]} {Smed: dd_Smed_v6_2676_0_1, dd_Smed_v6_2676_0_1, [Score=117, Expect=2e-32]} {RNA1509_50930} {RNA1310_69645} {RNA815_58248} Mlig455_068219 {REF} {Length: 2769} {Pfam: Hemingway/CFA97 [PF13879.8, score=70.9]} {Human: ENSG00000231256, CFAP97D1, CFAP97 domain containing 1, [Score=73.6, Expect=2e-16]} {Mouse: ENSMUSG00000010841, Cfap97d1, CFAP97 domain containing 1, [Score=81.3, Expect=1e-19]} {Smed: dd_Smed_v6_2676_0_1, dd_Smed_v6_2676_0_1, [Score=167, Expect=2e-52]} {RNA1509_28510} {RNA1310_69645} {RNA815_58248}
6.	MligTC455_51435	176	3.67	Mlig455_024682	Neo: Int S/G2/M Age: - Region-enriched R5: 1.635/0.03730	RNF165	0.957	-	-	-	-	0.957	-	Mlig455_024682 {REF} {Length: 2972} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=37.7]; zinc-RING finger domain [PF14634.8, score=23.4]; RING-H2 zinc finger domain [PF12678.9, score=22.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.4]} {Human: ENSG00000141622, RNF165, ring finger protein 165, [Score=52.8, Expect=1e-07]; ENSG00000157450, RNF111, ring finger protein 111, [Score=52.0, Expect=2e-06]; ENSG00000099999, RNF215, ring finger protein 215, [Score=50.4, Expect=4e-06]} {Mouse: ENSMUSG00000025427, Rnf165, ring finger protein 165, [Score=52.8, Expect=7e-08]; ENSMUSG00000032217, Rnf111, ring finger 111, [Score=51.6, Expect=2e-06]; ENSMUSG00000003581, Rnf215, ring finger protein 215, [Score=50.8, Expect=2e-06]} {Dmel: FBgn0037944, CG6923, [Score=50.1, Expect=4e-06]} {Celegans: WBGene00015194, B0432.13, [RH, Score=72.4, Expect=2e-13]} {Smed: dd_Smed_v6_45208_0_1, dd_Smed_v6_45208_0_1, [RH, Score=56.2, Expect=4e-09]} {RNA1509_38484, RNA1509_41878} {RNA1310_16843, RNA1509_38484, RNA1509_41878} {RNA1509_38484, RNA1509_41878, RNA815_15976}
7.	MligTC455_19148	151	3.15	Mlig455_041025	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.901	DUT	0.95	-	-	-	-	-	0.950	Mlig455_041025 {REF} {Length: 736} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=108.5]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=101, Expect=2e-27]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=99.4, Expect=2e-26]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=107, Expect=9e-30]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=105, Expect=5e-27]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=105, Expect=1e-29]} {RNA1509_31148} {RNA1310_12927} {RNA815_27386}

Berezikov Lab - 2020-2021 © ERIBA