M. lignano Tomo-Seq
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Results for MligTC455_37623

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37623 25582 532.95 Mlig455_010057

Neo: -

Age: Down-Down-Up

 EIF4A2 Mlig455_010057 {REF} {Length: 1730} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=153.9]; Helicase conserved C-terminal domain [PF00271.33, score=111.1]; Type III restriction enzyme, res subunit [PF04851.17, score=30.9]; AAA domain [PF13604.8, score=21.3]; AAA domain [PF13245.8, score=19.4]} {Human: ENSG00000156976, EIF4A2, eukaryotic translation initiation factor 4A2, [RH, Score=615, Expect=0.0]; ENSG00000161960, EIF4A1, eukaryotic translation initiation factor 4A1, [RH, Score=613, Expect=0.0]} {Mouse: ENSMUSG00000022884, Eif4a2, eukaryotic translation initiation factor 4A2, [RH, Score=615, Expect=0.0]; ENSMUSG00000059796, Eif4a1, eukaryotic translation initiation factor 4A1, [RH, Score=613, Expect=0.0]} {Dmel: FBgn0001942, eIF4A, eukaryotic translation initiation factor 4A, [RH, Score=571, Expect=0.0]} {Celegans: WBGene00002083, inf-1, Eukaryotic initiation factor 4A, [RH, Score=592, Expect=0.0]} {Smed: dd_Smed_v6_349_0_1, dd_Smed_v6_349_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_134} {RNA1310_17774} {RNA815_6794}

Cumulative graph for MligTC455_37623

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.346 9.11 0.00000 0.00138
RegionR2 -0.015 9.11 0.93059 1.00000
RegionR3 0.182 9.11 0.22241 0.76441
RegionR4 0.234 9.11 0.17572 0.44242
RegionR5 0.126 9.11 0.38925 0.74490
RegionR6 0.365 9.11 0.01362 0.20305
RegionR7 0.474 9.11 0.00166 0.04976
RegionR8 -0.02 9.11 0.90740 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.387 9.11 0.26561 0.97007
RegenerationR2 0.015 9.11 0.93658 1.00000
RegenerationR3 -0.17 9.11 0.37767 0.78917
RegenerationR4 -0.083 9.11 0.67615 0.94425
RegenerationR5 -0.004 9.11 0.98212 1.00000
RegenerationR6 -0.153 9.11 0.42188 0.75254
RegenerationBL -0.034 9.11 0.84372 1.00000
RegenerationTP -0.573 9.11 0.00233 0.07839


Genes with expression patterns similar to MligTC455_37623

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37623 25582 532.95 Mlig455_010057

Neo: -

Age: Down-Down-Up

 EIF4A2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_010057 {REF} {Length: 1730} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=153.9]; Helicase conserved C-terminal domain [PF00271.33, score=111.1]; Type III restriction enzyme, res subunit [PF04851.17, score=30.9]; AAA domain [PF13604.8, score=21.3]; AAA domain [PF13245.8, score=19.4]} {Human: ENSG00000156976, EIF4A2, eukaryotic translation initiation factor 4A2, [RH, Score=615, Expect=0.0]; ENSG00000161960, EIF4A1, eukaryotic translation initiation factor 4A1, [RH, Score=613, Expect=0.0]} {Mouse: ENSMUSG00000022884, Eif4a2, eukaryotic translation initiation factor 4A2, [RH, Score=615, Expect=0.0]; ENSMUSG00000059796, Eif4a1, eukaryotic translation initiation factor 4A1, [RH, Score=613, Expect=0.0]} {Dmel: FBgn0001942, eIF4A, eukaryotic translation initiation factor 4A, [RH, Score=571, Expect=0.0]} {Celegans: WBGene00002083, inf-1, Eukaryotic initiation factor 4A, [RH, Score=592, Expect=0.0]} {Smed: dd_Smed_v6_349_0_1, dd_Smed_v6_349_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_134} {RNA1310_17774} {RNA815_6794}
2. MligTC455_37622 25573 532.76 Mlig455_010015

Neo: -

Age: -

 EIF4A2 5.983 0.999 1.000 0.998 0.997 0.996 0.993 Mlig455_010015 {REF} {Length: 1729} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=153.9]; Helicase conserved C-terminal domain [PF00271.33, score=111.1]; Type III restriction enzyme, res subunit [PF04851.17, score=30.9]; AAA domain [PF13604.8, score=21.3]; AAA domain [PF13245.8, score=19.4]} {Human: ENSG00000156976, EIF4A2, eukaryotic translation initiation factor 4A2, [RH, Score=615, Expect=0.0]; ENSG00000161960, EIF4A1, eukaryotic translation initiation factor 4A1, [RH, Score=613, Expect=0.0]} {Mouse: ENSMUSG00000022884, Eif4a2, eukaryotic translation initiation factor 4A2, [RH, Score=615, Expect=0.0]; ENSMUSG00000059796, Eif4a1, eukaryotic translation initiation factor 4A1, [RH, Score=613, Expect=0.0]} {Dmel: FBgn0001942, eIF4A, eukaryotic translation initiation factor 4A, [RH, Score=571, Expect=0.0]} {Celegans: WBGene00002083, inf-1, Eukaryotic initiation factor 4A, [RH, Score=592, Expect=0.0]} {Smed: dd_Smed_v6_349_0_1, dd_Smed_v6_349_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_134} {RNA1310_17774, RNA1509_134} {RNA1509_134, RNA815_6794}
3. MligTC455_37624 25968 540.99 Mlig455_063263

Neo: -

Age: logFC(26M/2M)=3.493

 EIF4A2 5.969 0.998 0.998 0.989 0.994 0.994 0.996 Mlig455_063263 {REF} {Length: 1727} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=153.9]; Helicase conserved C-terminal domain [PF00271.33, score=111.1]; Type III restriction enzyme, res subunit [PF04851.17, score=30.9]; AAA domain [PF13604.8, score=21.3]; AAA domain [PF13245.8, score=19.4]} {Human: ENSG00000156976, EIF4A2, eukaryotic translation initiation factor 4A2, [RH, Score=615, Expect=0.0]; ENSG00000161960, EIF4A1, eukaryotic translation initiation factor 4A1, [RH, Score=613, Expect=0.0]} {Mouse: ENSMUSG00000022884, Eif4a2, eukaryotic translation initiation factor 4A2, [RH, Score=615, Expect=0.0]; ENSMUSG00000059796, Eif4a1, eukaryotic translation initiation factor 4A1, [RH, Score=613, Expect=0.0]} {Dmel: FBgn0001942, eIF4A, eukaryotic translation initiation factor 4A, [RH, Score=571, Expect=0.0]} {Celegans: WBGene00002083, inf-1, Eukaryotic initiation factor 4A, [RH, Score=592, Expect=0.0]} {Smed: dd_Smed_v6_349_0_1, dd_Smed_v6_349_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_134} {RNA1310_17774} {RNA815_6794}

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