TomoSeq data search

Data search

Results for MligTC455_37625

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37625	236	4.92	Mlig455_044627	Neo: - Age: -	PLOD2	Mlig455_044627 {REF} {Length: 3641} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13640.8, score=26.2]} {Human: ENSG00000152952, PLOD2, procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, [RH, Score=581, Expect=0.0]; ENSG00000106397, PLOD3, procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, [RH, Score=558, Expect=0.0]; ENSG00000083444, PLOD1, procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000032374, Plod2, procollagen lysine, 2-oxoglutarate 5-dioxygenase 2, [RH, Score=584, Expect=0.0]; ENSMUSG00000004846, Plod3, procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0036147, Plod, procollagen lysyl hydroxylase, [RH, Score=550, Expect=0.0]} {Celegans: WBGene00002497, let-268, Procollagen-lysine,2-oxoglutarate 5-dioxygenase, [RH, Score=540, Expect=0.0]} {Smed: dd_Smed_v6_4942_0_1, dd_Smed_v6_4942_0_1, [RH, Score=702, Expect=0.0]} {RNA1509_19823} {RNA1310_10077} {RNA815_3490}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37625

236

4.92

Mlig455_044627

Neo: -

Age: -

PLOD2

Mlig455_044627 {REF} {Length: 3641} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13640.8, score=26.2]} {Human: ENSG00000152952, PLOD2, procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, [RH, Score=581, Expect=0.0]; ENSG00000106397, PLOD3, procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, [RH, Score=558, Expect=0.0]; ENSG00000083444, PLOD1, procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000032374, Plod2, procollagen lysine, 2-oxoglutarate 5-dioxygenase 2, [RH, Score=584, Expect=0.0]; ENSMUSG00000004846, Plod3, procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0036147, Plod, procollagen lysyl hydroxylase, [RH, Score=550, Expect=0.0]} {Celegans: WBGene00002497, let-268, Procollagen-lysine,2-oxoglutarate 5-dioxygenase, [RH, Score=540, Expect=0.0]} {Smed: dd_Smed_v6_4942_0_1, dd_Smed_v6_4942_0_1, [RH, Score=702, Expect=0.0]} {RNA1509_19823} {RNA1310_10077} {RNA815_3490}

Cumulative graph for MligTC455_37625

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.398	2.903	0.48986	1.00000
RegionR2	1.322	2.903	0.10425	0.39791
RegionR3	0.424	2.903	0.48752	0.98670
RegionR4	-0.957	2.903	0.25645	0.55742
RegionR5	0.055	2.903	0.92305	1.00000
RegionR6	0.491	2.903	0.43026	0.99427
RegionR7	-0.286	2.903	0.74265	1.00000
RegionR8	0.35	2.903	0.71794	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-3.262	2.903	0.61756	1.00000
RegenerationR2	-0.165	2.903	0.79467	0.98804
RegenerationR3	0.534	2.903	0.45133	0.83276
RegenerationR4	1.175	2.903	0.14374	0.56840
RegenerationR5	1.144	2.903	0.08117	0.44275
RegenerationR6	0.145	2.903	0.83884	0.99513
RegenerationBL	0.911	2.903	0.29078	0.65272
RegenerationTP	0.837	2.903	0.35716	0.79793

Genes with expression patterns similar to MligTC455_37625

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37625	236	4.92	Mlig455_044627	Neo: - Age: -	PLOD2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_044627 {REF} {Length: 3641} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13640.8, score=26.2]} {Human: ENSG00000152952, PLOD2, procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, [RH, Score=581, Expect=0.0]; ENSG00000106397, PLOD3, procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, [RH, Score=558, Expect=0.0]; ENSG00000083444, PLOD1, procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000032374, Plod2, procollagen lysine, 2-oxoglutarate 5-dioxygenase 2, [RH, Score=584, Expect=0.0]; ENSMUSG00000004846, Plod3, procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0036147, Plod, procollagen lysyl hydroxylase, [RH, Score=550, Expect=0.0]} {Celegans: WBGene00002497, let-268, Procollagen-lysine,2-oxoglutarate 5-dioxygenase, [RH, Score=540, Expect=0.0]} {Smed: dd_Smed_v6_4942_0_1, dd_Smed_v6_4942_0_1, [RH, Score=702, Expect=0.0]} {RNA1509_19823} {RNA1310_10077} {RNA815_3490}
2.	MligTC455_37626	272	5.67	Mlig455_044684	Neo: - Age: -	PLOD2	5.815	0.936	0.976	0.988	0.958	0.983	0.974	Mlig455_044684 {REF} {Length: 3657} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13640.8, score=26.2]} {Human: ENSG00000152952, PLOD2, procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, [RH, Score=582, Expect=0.0]; ENSG00000106397, PLOD3, procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, [RH, Score=559, Expect=0.0]; ENSG00000083444, PLOD1, procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000032374, Plod2, procollagen lysine, 2-oxoglutarate 5-dioxygenase 2, [RH, Score=584, Expect=0.0]; ENSMUSG00000004846, Plod3, procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0036147, Plod, procollagen lysyl hydroxylase, [RH, Score=548, Expect=0.0]} {Celegans: WBGene00002497, let-268, Procollagen-lysine,2-oxoglutarate 5-dioxygenase, [RH, Score=540, Expect=0.0]} {Smed: dd_Smed_v6_4942_0_1, dd_Smed_v6_4942_0_1, [RH, Score=702, Expect=0.0]} {RNA1509_19823, RNA1509_58095, RNA1509_59789} {RNA1310_10077, RNA1509_19823, RNA1509_58095, RNA1509_59789} {RNA1509_19823, RNA1509_58095, RNA1509_59789, RNA815_3490}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_37625

236

4.92

Mlig455_044627

Neo: -

Age: -

PLOD2

1.000

MligTC455_37626

272

5.67

Mlig455_044684

Neo: -

Age: -

PLOD2

5.815

0.936

0.976

0.988

0.958

0.983

0.974

Mlig455_044684 {REF} {Length: 3657} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13640.8, score=26.2]} {Human: ENSG00000152952, PLOD2, procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, [RH, Score=582, Expect=0.0]; ENSG00000106397, PLOD3, procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, [RH, Score=559, Expect=0.0]; ENSG00000083444, PLOD1, procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000032374, Plod2, procollagen lysine, 2-oxoglutarate 5-dioxygenase 2, [RH, Score=584, Expect=0.0]; ENSMUSG00000004846, Plod3, procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0036147, Plod, procollagen lysyl hydroxylase, [RH, Score=548, Expect=0.0]} {Celegans: WBGene00002497, let-268, Procollagen-lysine,2-oxoglutarate 5-dioxygenase, [RH, Score=540, Expect=0.0]} {Smed: dd_Smed_v6_4942_0_1, dd_Smed_v6_4942_0_1, [RH, Score=702, Expect=0.0]} {RNA1509_19823, RNA1509_58095, RNA1509_59789} {RNA1310_10077, RNA1509_19823, RNA1509_58095, RNA1509_59789} {RNA1509_19823, RNA1509_58095, RNA1509_59789, RNA815_3490}