Data search
Results for MligTC455_37674
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_37674 | 58 | 1.21 | Mlig455_041015, Mlig455_041180 | Neo: - Age: logFC(26M/2M)=0.749 |
Mlig455_041015 {REF} {Length: 11420} {RNA1509_40042} {RNA1310_20292} {RNA815_9130} Mlig455_041180 {REF} {Length: 808} {NoTransDecoderORF} {RNA1509_32456} {RNA1310_70000} {RNA815_10062.1} |
Cumulative graph for MligTC455_37674
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.906 | 1.442 | 0.99958 | 1.00000 | |
| RegionR2 | 1.841 | 1.442 | 0.44734 | 0.83563 | |
| RegionR3 | 0.317 | 1.442 | 0.85449 | 1.00000 | |
| RegionR4 | 1.202 | 1.442 | 0.24343 | 0.54131 | |
| RegionR5 | -0.06 | 1.442 | 0.84804 | 1.00000 | |
| RegionR6 | -0.254 | 1.442 | 0.98547 | 1.00000 | |
| RegionR7 | -0.394 | 1.442 | 0.99994 | 1.00000 | |
| RegionR8 | 0.254 | 1.442 | 0.87194 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.344 | 1.442 | 0.99985 | 1.00000 | |
| RegenerationR2 | 4.212 | 1.442 | 0.00031 | 0.02372 | |
| RegenerationR3 | 4.29 | 1.442 | 0.00905 | 0.17401 | |
| RegenerationR4 | 2.294 | 1.442 | 0.06876 | 0.41810 | |
| RegenerationR5 | 3.959 | 1.442 | 0.00225 | 0.08272 | |
| RegenerationR6 | 4.571 | 1.442 | 0.00856 | 0.11383 | |
| RegenerationBL | 4.092 | 1.442 | 0.03831 | 0.22191 | |
| RegenerationTP | 4.106 | 1.442 | 0.09532 | 0.48396 |
Genes with expression patterns similar to MligTC455_37674
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_37674 | 58 | 1.21 | Mlig455_041015, Mlig455_041180 | Neo: - Age: logFC(26M/2M)=0.749 |
3 | - | - | - | 1.000 | 1.000 | 1.000 | Mlig455_041015 {REF} {Length: 11420} {RNA1509_40042} {RNA1310_20292} {RNA815_9130} Mlig455_041180 {REF} {Length: 808} {NoTransDecoderORF} {RNA1509_32456} {RNA1310_70000} {RNA815_10062.1} |
|
| 2. | MligTC455_26631 | 202 | 4.2 | Mlig455_001720 | Neo: - |
1.827 | - | - | - | 0.861 | 0.966 | - | Mlig455_001720 {REF} {Length: 1915} {RNA1509_23492} {RNA1310_19169.1, RNA1509_23492} {RNA1509_23492, RNA815_11654} | |
| 3. | MligTC455_32758 | 1809 | 37.69 | Mlig455_057763 | Neo: - Age: Down-Up-Down Region-enriched R2: 4.653/0.00033 |
0.977 | - | - | - | 0.977 | - | - | Mlig455_057763 {REF} {Length: 798} {Smed: dd_Smed_v6_1588_0_1, dd_Smed_v6_1588_0_1, [Score=45.1, Expect=7e-07]} {RNA1509_10840} {RNA1310_55718.2} {RNA815_28746} | |
| 4. | MligTC455_29231 | 369 | 7.69 | Mlig455_040251, Mlig455_054700 | Neo: - Age: logFC(26M/2M)=-0.328 |
TRIM2 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_040251 {REF} {Length: 1328} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.8]; RING-type zinc-finger [PF13445.8, score=27.1]; Ring finger domain [PF13639.8, score=24.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=20.9]; zinc-RING finger domain [PF14634.8, score=19.4]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=55.5, Expect=3e-08]; ENSG00000248710, AC079594.2, novel tripartite motif-containing 59 (TRIM59) and intraflagellar transport 80 homolog (Chlamydomonas) (IFT80) protein, [Score=52.8, Expect=2e-07]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=55.5, Expect=2e-08]} {Celegans: WBGene00000264, brc-1, BRCa homolog (Tumor suppressor gene Brca1), [Score=46.6, Expect=8e-06]} {RNA1509_57196} {RNA1310_28463.1, RNA1509_57196} {RNA1509_57196, RNA815_21041} Mlig455_054700 {REF} {Length: 1292} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.8]; RING-type zinc-finger [PF13445.8, score=27.1]; Ring finger domain [PF13639.8, score=24.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=20.5]; zinc-RING finger domain [PF14634.8, score=19.4]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=55.1, Expect=4e-08]; ENSG00000248710, AC079594.2, novel tripartite motif-containing 59 (TRIM59) and intraflagellar transport 80 homolog (Chlamydomonas) (IFT80) protein, [Score=52.4, Expect=3e-07]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=55.5, Expect=2e-08]} {Celegans: WBGene00000264, brc-1, BRCa homolog (Tumor suppressor gene Brca1), [Score=48.5, Expect=2e-06]} {RNA1509_43579, RNA1509_57196} {RNA1310_28463.1, RNA1509_43579} {RNA1509_43579, RNA815_21041} |