TomoSeq data search

Data search

Results for MligTC455_37693

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37693

286

5.97

Mlig455_063398

Neo: -

Age: -

CCNC

Mlig455_063398 {REF} {Length: 1792} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=50.1]; Cyclin C-terminal domain [PF16899.7, score=31.8]} {Human: ENSG00000112237, CCNC, cyclin C, [RH, Score=325, Expect=6e-112]} {Mouse: ENSMUSG00000028252, Ccnc, cyclin C, [RH, Score=325, Expect=3e-112]} {Dmel: FBgn0004597, CycC, Cyclin C, [RH, Score=295, Expect=2e-100]} {Celegans: WBGene00000506, cic-1, Cyclin-C, [RH, Score=192, Expect=8e-60]} {Smed: dd_Smed_v6_4978_0_1, dd_Smed_v6_4978_0_1, [RH, Score=289, Expect=9e-98]} {RNA1509_17208} {RNA1310_16620.1} {RNA815_8673.1}

Cumulative graph for MligTC455_37693

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.787	3.082	0.06990	0.59291
RegionR2	1.549	3.082	0.10293	0.39538
RegionR3	1.147	3.082	0.18359	0.71647
RegionR4	0.746	3.082	0.45472	0.78352
RegionR5	0.85	3.082	0.33569	0.68165
RegionR6	1.299	3.082	0.12050	0.63280
RegionR7	0.993	3.082	0.33116	0.96607
RegionR8	0.204	3.082	0.78826	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	6.564	3.082	0.15665	0.89972
RegenerationR2	-0.366	3.082	0.53088	0.88466
RegenerationR3	0.415	3.082	0.51598	0.86453
RegenerationR4	0.123	3.082	0.85837	1.00000
RegenerationR5	0.457	3.082	0.44746	0.82927
RegenerationR6	0.304	3.082	0.64503	0.89602
RegenerationBL	-0.513	3.082	0.56264	0.91721
RegenerationTP	0.939	3.082	0.24434	0.69061

Genes with expression patterns similar to MligTC455_37693

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37693	286	5.97	Mlig455_063398	Neo: - Age: -	CCNC	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_063398 {REF} {Length: 1792} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=50.1]; Cyclin C-terminal domain [PF16899.7, score=31.8]} {Human: ENSG00000112237, CCNC, cyclin C, [RH, Score=325, Expect=6e-112]} {Mouse: ENSMUSG00000028252, Ccnc, cyclin C, [RH, Score=325, Expect=3e-112]} {Dmel: FBgn0004597, CycC, Cyclin C, [RH, Score=295, Expect=2e-100]} {Celegans: WBGene00000506, cic-1, Cyclin-C, [RH, Score=192, Expect=8e-60]} {Smed: dd_Smed_v6_4978_0_1, dd_Smed_v6_4978_0_1, [RH, Score=289, Expect=9e-98]} {RNA1509_17208} {RNA1310_16620.1} {RNA815_8673.1}
2.	MligTC455_16900	225	4.69	Mlig455_035213	Neo: - Age: -	SLC25A26	1.853	-	-	-	-	0.881	0.972	Mlig455_035213 {REF} {Length: 2602} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=138.7]; Arginine-tRNA-protein transferase, C terminus [PF04377.17, score=108.7]; Arginine-tRNA-protein transferase, N terminus [PF04376.15, score=56.6]} {Human: ENSG00000144741, SLC25A26, solute carrier family 25 member 26, [RH, Score=210, Expect=9e-63]; ENSG00000282739, SLC25A26, solute carrier family 25 member 26, [RH, Score=210, Expect=9e-63]} {Mouse: ENSMUSG00000045100, Slc25a26, solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26, [RH, Score=211, Expect=3e-63]} {Dmel: FBgn0039357, CG4743, [RH, Score=194, Expect=1e-56]} {Celegans: WBGene00008364, slc-25A26, SLC (SoLute Carrier) homolog, [RH, Score=194, Expect=3e-57]} {Smed: dd_Smed_v6_13647_0_1, dd_Smed_v6_13647_0_1, [RH, Score=203, Expect=1e-60]} {RNA1509_27759} {RNA1310_20153} {RNA815_26741}
3.	MligTC455_22347	140	2.91	Mlig455_005470	Neo: - Age: -		1.784	-	-	-	-	0.814	0.970	Mlig455_005470 {REF} {Length: 3771} {TRANSSPLICED} {RNA1509_35899} {RNA1310_20218} {RNA815_23054}
4.	MligTC455_16400	316	6.58	Mlig455_020528	Neo: - Age: -		1.704	-	-	0.738	-	-	0.966	Mlig455_020528 {REF} {Length: 1266} {TRANSSPLICED} {RNA1509_18821, RNA1509_33940} {RNA1310_6782.1, RNA1509_18821, RNA1509_33940} {RNA1509_18821, RNA1509_33940, RNA815_4292}
5.	MligTC455_38891	74	1.54	Mlig455_064866	Neo: - Age: -		0.97	-	-	-	-	-	0.970	Mlig455_064866 {REF} {Length: 5908} {TRANSSPLICED} {Pfam: CD20-like family [PF04103.17, score=31.4]} {RNA1509_32088, RNA1509_47982} {RNA1310_22607, RNA1509_47982} {RNA1509_47982, RNA815_13989.1}
6.	MligTC455_20985	348	7.25	Mlig455_000485	Neo: - Age: Down-Up-Down Region-enriched R4: 2.494/0.00555		0.969	-	-	-	-	-	0.969	Mlig455_000485 {REF} {Length: 961} {TRANSSPLICED} {RNA1509_31693} {RNA1310_36320} {RNA815_19506}
7.	MligTC455_32579	511	10.64	Mlig455_036736	Neo: - Age: -	PTPN11	0.966	-	-	-	-	-	0.966	Mlig455_036736 {REF} {Length: 4916} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=232.7]; SH2 domain [PF00017.26, score=139.8]; SH2 domain [PF14633.8, score=28.4]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=22.2]; Tyrosine phosphatase family [PF13350.8, score=19.2]} {Human: ENSG00000179295, PTPN11, protein tyrosine phosphatase, non-receptor type 11, [RH, Score=491, Expect=6e-167]} {Mouse: ENSMUSG00000043733, Ptpn11, protein tyrosine phosphatase, non-receptor type 11, [RH, Score=491, Expect=9e-167]} {Dmel: FBgn0000382, csw, corkscrew, [RH, Score=304, Expect=3e-92]} {Celegans: WBGene00004214, ptp-2, Tyrosine-protein phosphatase non-receptor type ptp-2, [Score=302, Expect=4e-93]} {Smed: dd_Smed_v6_5785_0_1, dd_Smed_v6_5785_0_1, [RH, Score=457, Expect=1e-153]} {RNA1509_54357, RNA1509_7971} {RNA1310_26359, RNA1509_54357} {RNA1509_54357, RNA815_4691.1}
8.	MligTC455_22860	496	10.33	Mlig455_004498, Mlig455_026140, Mlig455_043117	Neo: - Age: -	MPP5	0.961	-	-	-	-	-	0.961	Mlig455_004498 {REF} {Length: 9831} {TRANSSPLICED} {Pfam: L27 domain [PF02828.18, score=26.0]; Variant SH3 domain [PF07653.19, score=25.7]; PDZ domain [PF00595.26, score=23.9]; PDZ domain [PF17820.3, score=22.3]; Variant SH3 domain [PF14604.8, score=21.0]; SH3 domain [PF00018.30, score=19.4]} {Human: ENSG00000072415, MPP5, membrane palmitoylated protein 5, [Score=150, Expect=1e-37]} {Mouse: ENSMUSG00000021112, Mpp5, membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5), [Score=148, Expect=4e-37]} {Dmel: FBgn0261873, sdt, stardust, [Score=146, Expect=5e-36]} {Celegans: WBGene00006467, magu-2, MAGUK family, [Score=144, Expect=8e-36]} {Smed: dd_Smed_v6_4689_0_1, dd_Smed_v6_4689_0_1, [Score=157, Expect=4e-40]} {RNA1509_32235} {RNA1310_6416.1} {RNA815_1977} Mlig455_026140 {REF} {Length: 7557} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=104.1]; L27 domain [PF02828.18, score=25.5]; Variant SH3 domain [PF07653.19, score=25.3]; PDZ domain [PF00595.26, score=23.4]; PDZ domain [PF17820.3, score=22.2]; Variant SH3 domain [PF14604.8, score=20.7]; SH3 domain [PF00018.30, score=18.9]} {Human: ENSG00000072415, MPP5, membrane palmitoylated protein 5, [Score=278, Expect=9e-82]} {Mouse: ENSMUSG00000021112, Mpp5, membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5), [Score=276, Expect=5e-81]} {Dmel: FBgn0050021, metro, menage a trois, [Score=248, Expect=9e-72]} {Celegans: WBGene00006467, magu-2, MAGUK family, [Score=144, Expect=1e-35]} {Smed: dd_Smed_v6_4689_0_1, dd_Smed_v6_4689_0_1, [Score=275, Expect=2e-80]} {RNA1509_32235} {RNA1310_6416.1} {RNA815_1977} Mlig455_043117 {REF} {Length: 8802} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=98.9]; L27 domain [PF02828.18, score=26.2]; Variant SH3 domain [PF07653.19, score=25.3]; PDZ domain [PF00595.26, score=23.4]; PDZ domain [PF17820.3, score=22.1]; Variant SH3 domain [PF14604.8, score=20.4]; SH3 domain [PF00018.30, score=18.9]} {Human: ENSG00000072415, MPP5, membrane palmitoylated protein 5, [Score=273, Expect=7e-80]} {Mouse: ENSMUSG00000021112, Mpp5, membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5), [Score=271, Expect=4e-79]} {Dmel: FBgn0050021, metro, menage a trois, [Score=243, Expect=8e-70]} {Celegans: WBGene00006467, magu-2, MAGUK family, [Score=144, Expect=2e-35]} {Smed: dd_Smed_v6_4689_0_1, dd_Smed_v6_4689_0_1, [Score=279, Expect=7e-82]} {RNA1509_32235} {RNA1310_6416.1} {RNA815_1977}
9.	MligTC455_44551	119	2.48	Mlig455_064247	Neo: - Age: Up-Down-Down	PRDX1	0.961	-	-	-	-	-	0.961	Mlig455_064247 {REF} {Length: 1961} {TRANSSPLICED} {Pfam: AhpC/TSA family [PF00578.23, score=130.3]; Redoxin [PF08534.12, score=67.5]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=56.0]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [RH, Score=298, Expect=8e-102]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [RH, Score=294, Expect=1e-100]} {Dmel: FBgn0040309, Jafrac1, thioredoxin peroxidase 1, [RH, Score=281, Expect=8e-96]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [RH, Score=282, Expect=4e-96]} {Smed: dd_Smed_v6_7781_0_2, dd_Smed_v6_7781_0_2, [RH, Score=291, Expect=7e-100]} {RNA1509_29776} {RNA1310_37433} {RNA815_22691}
10.	MligTC455_47236	631	13.14	Mlig455_011561	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.763	UBASH3B	0.959	-	-	-	-	-	0.959	Mlig455_011561 {REF} {Length: 5217} {Pfam: Histidine phosphatase superfamily (branch 1) [PF00300.24, score=51.3]} {Human: ENSG00000154127, UBASH3B, ubiquitin associated and SH3 domain containing B, [RH, Score=153, Expect=2e-38]} {Mouse: ENSMUSG00000032020, Ubash3b, ubiquitin associated and SH3 domain containing, B, [RH, Score=154, Expect=2e-39]} {Dmel: FBgn0039137, CG13604, [RH, Score=120, Expect=5e-28]} {Celegans: WBGene00020321, T07F12.1, [RH, Score=116, Expect=8e-29]} {Smed: dd_Smed_v6_12024_0_1, dd_Smed_v6_12024_0_1, [RH, Score=162, Expect=5e-42]} {RNA1509_10245, RNA1509_27327} {RNA1310_4087.1, RNA1509_27327} {RNA1509_27327, RNA815_2334.1}
11.	MligTC455_29510	1443	30.06	Mlig455_003367, Mlig455_003369	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.360 Region-enriched R8: 1.897/0.00063 Region-enriched R7: 1.375/0.01086 Regeneration-downregulated BL: -2.492 Regeneration-depleted BL: -2.492		0.955	-	-	0.955	-	-	-	Mlig455_003367 {REF} {Length: 1906} {Pfam: Interferon-induced 6-16 family [PF06140.15, score=25.4]} {RNA1509_46297} {RNA1310_31671} {RNA815_28401} Mlig455_003369 {REF} {Length: 1024} {RNA1509_28087, RNA1509_46297} {RNA1310_31671, RNA1509_28087, RNA1509_46297} {RNA1509_28087, RNA1509_46297, RNA815_17641.1}
12.	MligTC455_40097	1677	34.93	Mlig455_026961	Neo: - Age: Down-Up-Down	SOCS7	0.952	-	-	-	-	-	0.952	Mlig455_026961 {REF} {Length: 4574} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=46.0]; SOCS box [PF07525.18, score=27.9]} {Human: ENSG00000274229, SOCS7, suppressor of cytokine signaling 7, [RH, Score=178, Expect=5e-48]; ENSG00000274211, SOCS7, suppressor of cytokine signaling 7, [RH, Score=178, Expect=5e-48]} {Mouse: ENSMUSG00000038485, Socs7, suppressor of cytokine signaling 7, [RH, Score=177, Expect=7e-48]} {Dmel: FBgn0030869, Socs16D, Suppressor of Cytokine Signaling at 16D, [Score=150, Expect=2e-37]} {Celegans: WBGene00006410, nck-1, NCK (Non-Catalytic region of tyrosine Kinase) adaptor protein family, [Score=48.1, Expect=8e-06]} {Smed: dd_Smed_v6_489_0_3, dd_Smed_v6_489_0_3, [RH, Score=240, Expect=8e-68]} {RNA1509_24121, RNA1509_6731} {RNA1310_8870.1, RNA1509_24121, RNA1509_6731} {RNA1509_24121, RNA1509_6731, RNA815_8476}
13.	MligTC455_40098	3417	71.19	Mlig455_027048, Mlig455_027109	Neo: - Age: -	SOCS7	0.951	-	-	-	-	-	0.951	Mlig455_027048 {REF} {Length: 5227} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=45.9]; SOCS box [PF07525.18, score=27.9]} {Human: ENSG00000274229, SOCS7, suppressor of cytokine signaling 7, [RH, Score=178, Expect=7e-48]; ENSG00000274211, SOCS7, suppressor of cytokine signaling 7, [RH, Score=178, Expect=7e-48]} {Mouse: ENSMUSG00000038485, Socs7, suppressor of cytokine signaling 7, [RH, Score=177, Expect=1e-47]} {Dmel: FBgn0030869, Socs16D, Suppressor of Cytokine Signaling at 16D, [Score=149, Expect=3e-37]} {Celegans: WBGene00006410, nck-1, NCK (Non-Catalytic region of tyrosine Kinase) adaptor protein family, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_489_0_3, dd_Smed_v6_489_0_3, [RH, Score=239, Expect=1e-67]} {RNA1509_15557, RNA1509_19344, RNA1509_19450, RNA1509_40719, RNA1509_6731} {RNA1310_8870.1, RNA1509_15557, RNA1509_19344, RNA1509_19450, RNA1509_40719} {RNA1509_15557, RNA1509_19344, RNA1509_19450, RNA1509_40719, RNA815_8476} Mlig455_027109 {REF} {Length: 4821} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=46.0]; SOCS box [PF07525.18, score=27.9]} {Human: ENSG00000274229, SOCS7, suppressor of cytokine signaling 7, [RH, Score=178, Expect=5e-48]; ENSG00000274211, SOCS7, suppressor of cytokine signaling 7, [RH, Score=178, Expect=5e-48]} {Mouse: ENSMUSG00000038485, Socs7, suppressor of cytokine signaling 7, [RH, Score=177, Expect=7e-48]} {Dmel: FBgn0030869, Socs16D, Suppressor of Cytokine Signaling at 16D, [Score=150, Expect=2e-37]} {Celegans: WBGene00006410, nck-1, NCK (Non-Catalytic region of tyrosine Kinase) adaptor protein family, [Score=48.1, Expect=8e-06]} {Smed: dd_Smed_v6_489_0_3, dd_Smed_v6_489_0_3, [RH, Score=240, Expect=8e-68]} {RNA1509_15736, RNA1509_31866, RNA1509_6731} {RNA1310_8870.1, RNA1509_15736, RNA1509_31866} {RNA1509_15736, RNA1509_31866, RNA815_8476}
14.	MligTC455_33896	34	0.7	Mlig455_055659	Neo: Irradiation Age: Up-Down-Up	TEX14	0.95	-	-	-	-	-	0.950	Mlig455_055659 {REF} {Length: 6086} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=69.8]; Protein kinase domain [PF00069.27, score=65.3]; Ankyrin repeats (many copies) [PF13637.8, score=52.6]; Ankyrin repeat [PF00023.32, score=51.3]; Ankyrin repeats (3 copies) [PF12796.9, score=50.0]; Ankyrin repeats (many copies) [PF13857.8, score=32.1]; Ankyrin repeat [PF13606.8, score=32.0]} {Human: ENSG00000121101, TEX14, testis expressed 14, intercellular bridge forming factor, [RH, Score=169, Expect=1e-41]} {Mouse: ENSMUSG00000010342, Tex14, testis expressed gene 14, [RH, Score=167, Expect=4e-41]} {Dmel: FBgn0036801, MYPT-75D, [Score=68.6, Expect=4e-11]} {Celegans: WBGene00000565, cnt-1, Arf-GAP with ANK repeat and PH domain-containing protein cnt-1 Truncated ctn-1, [RH, Score=68.9, Expect=6e-12]} {Smed: dd_Smed_v6_10115_0_1, dd_Smed_v6_10115_0_1, [Score=69.3, Expect=2e-11]} {RNA1509_12042} {RNA1310_1137.2} {RNA815_6538}

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