Data search


search
Exact
Search

Results for MligTC455_37783

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37783 13671 284.81 Mlig455_009905, Mlig455_035133

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.271

Region-enriched R4: 1.172/0.00042

PSMB2

Mlig455_009905 {REF} {Length: 1564} {Pfam: Proteasome subunit [PF00227.28, score=141.3]} {Human: ENSG00000126067, PSMB2, proteasome subunit beta 2, [RH, Score=218, Expect=4e-72]} {Mouse: ENSMUSG00000028837, Psmb2, proteasome (prosome, macropain) subunit, beta type 2, [RH, Score=215, Expect=4e-71]} {Dmel: FBgn0032596, Prosbeta4, Proteasome beta4 subunit, [RH, Score=194, Expect=4e-63]} {Celegans: WBGene00003950, pbs-4, Proteasome subunit beta type-2, [RH, Score=142, Expect=2e-42]} {Smed: dd_Smed_v6_2477_0_1, dd_Smed_v6_2477_0_1, [RH, Score=236, Expect=7e-80]} {RNA1509_12254, RNA1509_4691, RNA1509_55697, RNA1509_9739} {RNA1310_29852.1, RNA1509_12254, RNA1509_4691, RNA1509_55697, RNA1509_9739} {RNA1509_12254, RNA1509_4691, RNA1509_55697, RNA1509_9739, RNA815_12817.1}

Mlig455_035133 {REF} {Length: 920} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=141.3]} {Human: ENSG00000126067, PSMB2, proteasome subunit beta 2, [RH, Score=218, Expect=4e-72]} {Mouse: ENSMUSG00000028837, Psmb2, proteasome (prosome, macropain) subunit, beta type 2, [RH, Score=215, Expect=4e-71]} {Dmel: FBgn0032596, Prosbeta4, Proteasome beta4 subunit, [RH, Score=194, Expect=4e-63]} {Celegans: WBGene00003950, pbs-4, Proteasome subunit beta type-2, [RH, Score=142, Expect=2e-42]} {Smed: dd_Smed_v6_2477_0_1, dd_Smed_v6_2477_0_1, [RH, Score=236, Expect=7e-80]} {RNA1509_12254} {RNA1310_29852.1} {RNA815_12817.1}

Cumulative graph for MligTC455_37783

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.227 8.233 0.00322 0.18328
RegionR2 -0.506 8.233 0.08626 0.36116
RegionR3 -0.039 8.233 0.87811 1.00000
RegionR4 1.172 8.233 0.00002 0.00042
RegionR5 0.781 8.233 0.00074 0.00800
RegionR6 0.371 8.233 0.13033 0.65140
RegionR7 -0.135 8.233 0.60610 1.00000
RegionR8 -0.417 8.233 0.15529 0.71384

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.279 8.233 0.58531 1.00000
RegenerationR2 0.091 8.233 0.77094 0.98071
RegenerationR3 0.139 8.233 0.66375 0.93456
RegenerationR4 -0.332 8.233 0.31677 0.75615
RegenerationR5 -0.086 8.233 0.78322 0.98255
RegenerationR6 0.255 8.233 0.41996 0.75114
RegenerationBL 0.571 8.233 0.03695 0.21724
RegenerationTP 1.047 8.233 0.00038 0.02653


Genes with expression patterns similar to MligTC455_37783

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37783 13671 284.81 Mlig455_009905, Mlig455_035133

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.271

Region-enriched R4: 1.172/0.00042

PSMB2 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_009905 {REF} {Length: 1564} {Pfam: Proteasome subunit [PF00227.28, score=141.3]} {Human: ENSG00000126067, PSMB2, proteasome subunit beta 2, [RH, Score=218, Expect=4e-72]} {Mouse: ENSMUSG00000028837, Psmb2, proteasome (prosome, macropain) subunit, beta type 2, [RH, Score=215, Expect=4e-71]} {Dmel: FBgn0032596, Prosbeta4, Proteasome beta4 subunit, [RH, Score=194, Expect=4e-63]} {Celegans: WBGene00003950, pbs-4, Proteasome subunit beta type-2, [RH, Score=142, Expect=2e-42]} {Smed: dd_Smed_v6_2477_0_1, dd_Smed_v6_2477_0_1, [RH, Score=236, Expect=7e-80]} {RNA1509_12254, RNA1509_4691, RNA1509_55697, RNA1509_9739} {RNA1310_29852.1, RNA1509_12254, RNA1509_4691, RNA1509_55697, RNA1509_9739} {RNA1509_12254, RNA1509_4691, RNA1509_55697, RNA1509_9739, RNA815_12817.1}

Mlig455_035133 {REF} {Length: 920} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=141.3]} {Human: ENSG00000126067, PSMB2, proteasome subunit beta 2, [RH, Score=218, Expect=4e-72]} {Mouse: ENSMUSG00000028837, Psmb2, proteasome (prosome, macropain) subunit, beta type 2, [RH, Score=215, Expect=4e-71]} {Dmel: FBgn0032596, Prosbeta4, Proteasome beta4 subunit, [RH, Score=194, Expect=4e-63]} {Celegans: WBGene00003950, pbs-4, Proteasome subunit beta type-2, [RH, Score=142, Expect=2e-42]} {Smed: dd_Smed_v6_2477_0_1, dd_Smed_v6_2477_0_1, [RH, Score=236, Expect=7e-80]} {RNA1509_12254} {RNA1310_29852.1} {RNA815_12817.1}
2. MligTC455_37784 6924 144.24 Mlig455_035138

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-1.207

Region-enriched R4: 1.236/0.00007

PSMB2 5.921 0.986 0.995 0.993 0.992 0.998 0.957 Mlig455_035138 {REF} {Length: 925} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=141.3]} {Human: ENSG00000126067, PSMB2, proteasome subunit beta 2, [RH, Score=218, Expect=4e-72]} {Mouse: ENSMUSG00000028837, Psmb2, proteasome (prosome, macropain) subunit, beta type 2, [RH, Score=215, Expect=4e-71]} {Dmel: FBgn0032596, Prosbeta4, Proteasome beta4 subunit, [RH, Score=194, Expect=4e-63]} {Celegans: WBGene00003950, pbs-4, Proteasome subunit beta type-2, [RH, Score=142, Expect=2e-42]} {Smed: dd_Smed_v6_2477_0_1, dd_Smed_v6_2477_0_1, [RH, Score=236, Expect=7e-80]} {RNA1509_12254, RNA1509_33989} {RNA1310_29852.1, RNA1509_33989} {RNA1509_33989, RNA815_12817.1}
3. MligTC455_37782 4491 93.57 Mlig455_031521

Neo: -

Age: logFC(26M/2M)=-0.699

PSMB2 4.855 0.966 0.992 - 0.972 0.967 0.958 Mlig455_031521 {REF} {Length: 1540} {Pfam: Proteasome subunit [PF00227.28, score=67.1]} {Human: ENSG00000126067, PSMB2, proteasome subunit beta 2, [Score=101, Expect=4e-27]} {Mouse: ENSMUSG00000028837, Psmb2, proteasome (prosome, macropain) subunit, beta type 2, [Score=101, Expect=3e-27]} {Dmel: FBgn0032596, Prosbeta4, Proteasome beta4 subunit, [Score=93.6, Expect=2e-24]} {Celegans: WBGene00003950, pbs-4, Proteasome subunit beta type-2, [Score=55.1, Expect=9e-10]} {Smed: dd_Smed_v6_2477_0_1, dd_Smed_v6_2477_0_1, [Score=106, Expect=2e-29]} {RNA1509_9739} {RNA1310_29852.1} {RNA815_12817.1}
4. MligTC455_33733 1577 32.85 Mlig455_050610

Neo: Int S/G2/M

Age: -

SRRM2 1.696 - - - 0.955 0.741 - Mlig455_050610 {REF} {Length: 1579} {TRANSSPLICED} {Pfam: cwf21 domain [PF08312.14, score=50.8]} {Human: ENSG00000167978, SRRM2, serine/arginine repetitive matrix 2, [RH, Score=130, Expect=2e-33]} {Mouse: ENSMUSG00000039218, Srrm2, serine/arginine repetitive matrix 2, [RH, Score=130, Expect=1e-33]} {Dmel: FBgn0035253, CG7971, [RH, Score=147, Expect=5e-40]} {Celegans: WBGene00013260, rsr-2, SR protein related, [RH, Score=116, Expect=7e-30]} {Smed: dd_Smed_v6_3805_0_1, dd_Smed_v6_3805_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_11337, RNA1509_31550, RNA1509_40254, RNA1509_48121, RNA1509_7940} {RNA1310_30973.1, RNA1509_11337, RNA1509_31550, RNA1509_40254, RNA1509_48121, RNA1509_7940} {RNA1509_11337, RNA1509_31550, RNA1509_40254, RNA1509_48121, RNA1509_7940, RNA815_15484}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA