TomoSeq data search

Data search

Results for MligTC455_37857

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37857	3046	63.45	Mlig455_000254, Mlig455_058538	Neo: - Age: - Region-enriched R4: 1.338/0.00154	RAB11B	Mlig455_000254 {REF} {Length: 1608} {Pfam: Ras family [PF00071.24, score=164.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=77.9]; ADP-ribosylation factor family [PF00025.23, score=34.2]} {Human: ENSG00000185236, RAB11B, RAB11B, member RAS oncogene family, [Score=255, Expect=1e-86]; ENSG00000103769, RAB11A, RAB11A, member RAS oncogene family, [Score=246, Expect=3e-83]} {Mouse: ENSMUSG00000077450, Rab11b, RAB11B, member RAS oncogene family, [Score=254, Expect=1e-86]; ENSMUSG00000004771, Rab11a, RAB11A, member RAS oncogene family, [Score=246, Expect=2e-83]} {Dmel: FBgn0015790, Rab11, [Score=252, Expect=6e-86]} {Celegans: WBGene00004274, rab-11.1, Ras-related protein rab-11.1, [Score=245, Expect=2e-83]} {Smed: dd_Smed_v6_867_0_1, dd_Smed_v6_867_0_1, [Score=244, Expect=4e-83]} {RNA1509_6494} {RNA1310_20524, RNA1509_6494} {RNA1509_6494, RNA815_8530} Mlig455_058538 {REF} {Length: 1692} {Pfam: Ras family [PF00071.24, score=204.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=115.9]; ADP-ribosylation factor family [PF00025.23, score=47.6]; 50S ribosome-binding GTPase [PF01926.25, score=28.2]} {Human: ENSG00000185236, RAB11B, RAB11B, member RAS oncogene family, [Score=321, Expect=3e-112]; ENSG00000103769, RAB11A, RAB11A, member RAS oncogene family, [Score=312, Expect=7e-109]} {Mouse: ENSMUSG00000077450, Rab11b, RAB11B, member RAS oncogene family, [Score=320, Expect=4e-112]; ENSMUSG00000004771, Rab11a, RAB11A, member RAS oncogene family, [Score=312, Expect=5e-109]} {Dmel: FBgn0015790, Rab11, [Score=316, Expect=1e-110]} {Celegans: WBGene00004274, rab-11.1, Ras-related protein rab-11.1, [Score=313, Expect=2e-109]} {Smed: dd_Smed_v6_6025_0_1, dd_Smed_v6_6025_0_1, [RH, Score=294, Expect=3e-102]} {RNA1509_6494} {RNA1310_20524} {RNA815_8530}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37857

3046

63.45

Mlig455_000254, Mlig455_058538

Neo: -

Age: -

Region-enriched R4: 1.338/0.00154

RAB11B

Mlig455_000254 {REF} {Length: 1608} {Pfam: Ras family [PF00071.24, score=164.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=77.9]; ADP-ribosylation factor family [PF00025.23, score=34.2]} {Human: ENSG00000185236, RAB11B, RAB11B, member RAS oncogene family, [Score=255, Expect=1e-86]; ENSG00000103769, RAB11A, RAB11A, member RAS oncogene family, [Score=246, Expect=3e-83]} {Mouse: ENSMUSG00000077450, Rab11b, RAB11B, member RAS oncogene family, [Score=254, Expect=1e-86]; ENSMUSG00000004771, Rab11a, RAB11A, member RAS oncogene family, [Score=246, Expect=2e-83]} {Dmel: FBgn0015790, Rab11, [Score=252, Expect=6e-86]} {Celegans: WBGene00004274, rab-11.1, Ras-related protein rab-11.1, [Score=245, Expect=2e-83]} {Smed: dd_Smed_v6_867_0_1, dd_Smed_v6_867_0_1, [Score=244, Expect=4e-83]} {RNA1509_6494} {RNA1310_20524, RNA1509_6494} {RNA1509_6494, RNA815_8530}

Mlig455_058538 {REF} {Length: 1692} {Pfam: Ras family [PF00071.24, score=204.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=115.9]; ADP-ribosylation factor family [PF00025.23, score=47.6]; 50S ribosome-binding GTPase [PF01926.25, score=28.2]} {Human: ENSG00000185236, RAB11B, RAB11B, member RAS oncogene family, [Score=321, Expect=3e-112]; ENSG00000103769, RAB11A, RAB11A, member RAS oncogene family, [Score=312, Expect=7e-109]} {Mouse: ENSMUSG00000077450, Rab11b, RAB11B, member RAS oncogene family, [Score=320, Expect=4e-112]; ENSMUSG00000004771, Rab11a, RAB11A, member RAS oncogene family, [Score=312, Expect=5e-109]} {Dmel: FBgn0015790, Rab11, [Score=316, Expect=1e-110]} {Celegans: WBGene00004274, rab-11.1, Ras-related protein rab-11.1, [Score=313, Expect=2e-109]} {Smed: dd_Smed_v6_6025_0_1, dd_Smed_v6_6025_0_1, [RH, Score=294, Expect=3e-102]} {RNA1509_6494} {RNA1310_20524} {RNA815_8530}

Cumulative graph for MligTC455_37857

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.708	6.177	0.00152	0.12899
RegionR2	-0.226	6.177	0.54051	0.90867
RegionR3	0.168	6.177	0.57779	1.00000
RegionR4	1.338	6.177	0.00010	0.00154
RegionR5	0.854	6.177	0.00240	0.02001
RegionR6	0.759	6.177	0.01006	0.16839
RegionR7	0.33	6.177	0.32530	0.96029
RegionR8	-0.515	6.177	0.24923	0.86839

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.456	6.177	0.73161	1.00000
RegenerationR2	0.608	6.177	0.05618	0.38977
RegenerationR3	0.235	6.177	0.49201	0.85481
RegenerationR4	-0.045	6.177	0.89765	1.00000
RegenerationR5	0.297	6.177	0.36370	0.77451
RegenerationR6	0.221	6.177	0.50350	0.80866
RegenerationBL	-0.019	6.177	0.95631	1.00000
RegenerationTP	0.326	6.177	0.38018	0.81556

Genes with expression patterns similar to MligTC455_37857

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37857	3046	63.45	Mlig455_000254, Mlig455_058538	Neo: - Age: - Region-enriched R4: 1.338/0.00154	RAB11B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000254 {REF} {Length: 1608} {Pfam: Ras family [PF00071.24, score=164.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=77.9]; ADP-ribosylation factor family [PF00025.23, score=34.2]} {Human: ENSG00000185236, RAB11B, RAB11B, member RAS oncogene family, [Score=255, Expect=1e-86]; ENSG00000103769, RAB11A, RAB11A, member RAS oncogene family, [Score=246, Expect=3e-83]} {Mouse: ENSMUSG00000077450, Rab11b, RAB11B, member RAS oncogene family, [Score=254, Expect=1e-86]; ENSMUSG00000004771, Rab11a, RAB11A, member RAS oncogene family, [Score=246, Expect=2e-83]} {Dmel: FBgn0015790, Rab11, [Score=252, Expect=6e-86]} {Celegans: WBGene00004274, rab-11.1, Ras-related protein rab-11.1, [Score=245, Expect=2e-83]} {Smed: dd_Smed_v6_867_0_1, dd_Smed_v6_867_0_1, [Score=244, Expect=4e-83]} {RNA1509_6494} {RNA1310_20524, RNA1509_6494} {RNA1509_6494, RNA815_8530} Mlig455_058538 {REF} {Length: 1692} {Pfam: Ras family [PF00071.24, score=204.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=115.9]; ADP-ribosylation factor family [PF00025.23, score=47.6]; 50S ribosome-binding GTPase [PF01926.25, score=28.2]} {Human: ENSG00000185236, RAB11B, RAB11B, member RAS oncogene family, [Score=321, Expect=3e-112]; ENSG00000103769, RAB11A, RAB11A, member RAS oncogene family, [Score=312, Expect=7e-109]} {Mouse: ENSMUSG00000077450, Rab11b, RAB11B, member RAS oncogene family, [Score=320, Expect=4e-112]; ENSMUSG00000004771, Rab11a, RAB11A, member RAS oncogene family, [Score=312, Expect=5e-109]} {Dmel: FBgn0015790, Rab11, [Score=316, Expect=1e-110]} {Celegans: WBGene00004274, rab-11.1, Ras-related protein rab-11.1, [Score=313, Expect=2e-109]} {Smed: dd_Smed_v6_6025_0_1, dd_Smed_v6_6025_0_1, [RH, Score=294, Expect=3e-102]} {RNA1509_6494} {RNA1310_20524} {RNA815_8530}
2.	MligTC455_42497	427	8.9	Mlig455_025883, Mlig455_062264	Neo: - Age: - Region-enriched R5: 1.978/0.02600	SOCS6	0.954	-	-	-	-	0.954	-	Mlig455_025883 {REF} {Length: 2688} {TRANSSPLICED} {Pfam: SOCS box [PF07525.18, score=33.0]; SH2 domain [PF00017.26, score=26.0]} {Human: ENSG00000170677, SOCS6, suppressor of cytokine signaling 6, [Score=77.4, Expect=4e-15]} {Mouse: ENSMUSG00000056153, Socs6, suppressor of cytokine signaling 6, [Score=76.6, Expect=4e-15]} {Dmel: FBgn0030869, Socs16D, Suppressor of Cytokine Signaling at 16D, [Score=77.0, Expect=3e-15]} {Celegans: WBGene00009556, F39B2.5, [Score=45.4, Expect=1e-05]} {Smed: dd_Smed_v6_13802_0_1, dd_Smed_v6_13802_0_1, [Score=94.4, Expect=1e-21]} {RNA1509_29098} {RNA1310_16429.1} {RNA815_12857} Mlig455_062264 {REF} {Length: 1811} {TRANSSPLICED} {Pfam: SOCS box [PF07525.18, score=33.1]; SH2 domain [PF00017.26, score=28.0]} {Human: ENSG00000170677, SOCS6, suppressor of cytokine signaling 6, [Score=80.9, Expect=3e-16]} {Mouse: ENSMUSG00000056153, Socs6, suppressor of cytokine signaling 6, [Score=80.5, Expect=2e-16]} {Dmel: FBgn0030869, Socs16D, Suppressor of Cytokine Signaling at 16D, [Score=79.0, Expect=7e-16]} {Celegans: WBGene00009556, F39B2.5, [Score=47.0, Expect=4e-06]} {Smed: dd_Smed_v6_13802_0_1, dd_Smed_v6_13802_0_1, [Score=95.1, Expect=5e-22]} {RNA1509_29098} {RNA1310_16429.1, RNA1509_29098} {RNA1509_29098, RNA815_12857}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_37857

3046

63.45

Mlig455_000254, Mlig455_058538

Neo: -

Age: -

Region-enriched R4: 1.338/0.00154

RAB11B

1.000

MligTC455_42497

427

8.9

Mlig455_025883, Mlig455_062264

Neo: -

Age: -

Region-enriched R5: 1.978/0.02600

SOCS6

0.954

Mlig455_025883 {REF} {Length: 2688} {TRANSSPLICED} {Pfam: SOCS box [PF07525.18, score=33.0]; SH2 domain [PF00017.26, score=26.0]} {Human: ENSG00000170677, SOCS6, suppressor of cytokine signaling 6, [Score=77.4, Expect=4e-15]} {Mouse: ENSMUSG00000056153, Socs6, suppressor of cytokine signaling 6, [Score=76.6, Expect=4e-15]} {Dmel: FBgn0030869, Socs16D, Suppressor of Cytokine Signaling at 16D, [Score=77.0, Expect=3e-15]} {Celegans: WBGene00009556, F39B2.5, [Score=45.4, Expect=1e-05]} {Smed: dd_Smed_v6_13802_0_1, dd_Smed_v6_13802_0_1, [Score=94.4, Expect=1e-21]} {RNA1509_29098} {RNA1310_16429.1} {RNA815_12857}

Mlig455_062264 {REF} {Length: 1811} {TRANSSPLICED} {Pfam: SOCS box [PF07525.18, score=33.1]; SH2 domain [PF00017.26, score=28.0]} {Human: ENSG00000170677, SOCS6, suppressor of cytokine signaling 6, [Score=80.9, Expect=3e-16]} {Mouse: ENSMUSG00000056153, Socs6, suppressor of cytokine signaling 6, [Score=80.5, Expect=2e-16]} {Dmel: FBgn0030869, Socs16D, Suppressor of Cytokine Signaling at 16D, [Score=79.0, Expect=7e-16]} {Celegans: WBGene00009556, F39B2.5, [Score=47.0, Expect=4e-06]} {Smed: dd_Smed_v6_13802_0_1, dd_Smed_v6_13802_0_1, [Score=95.1, Expect=5e-22]} {RNA1509_29098} {RNA1310_16429.1, RNA1509_29098} {RNA1509_29098, RNA815_12857}