TomoSeq data search

Data search

Results for MligTC455_37859

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37859	22141	461.28	Mlig455_021638	Neo: Int S/G2/M Age: -	RPS16	Mlig455_021638 {REF} {Length: 637} {TRANSSPLICED} {Pfam: Ribosomal protein S9/S16 [PF00380.21, score=109.3]} {Human: ENSG00000105193, RPS16, ribosomal protein S16, [RH, Score=242, Expect=3e-83]} {Mouse: ENSMUSG00000037563, Rps16, ribosomal protein S16, [RH, Score=242, Expect=2e-83]} {Dmel: FBgn0034743, RpS16, Ribosomal protein S16, [RH, Score=239, Expect=2e-82]} {Celegans: WBGene00004485, rps-16, 40S ribosomal protein S16, [RH, Score=216, Expect=2e-73]} {Smed: dd_Smed_v6_170_0_1, dd_Smed_v6_170_0_1, [RH, Score=214, Expect=1e-72]} {RNA1310_55878} {RNA815_27692}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_37859

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.472	8.901	0.15734	0.77642
RegionR2	-0.505	8.901	0.06570	0.31067
RegionR3	0.069	8.901	0.76816	1.00000
RegionR4	0.332	8.901	0.19225	0.46852
RegionR5	0.485	8.901	0.02920	0.12713
RegionR6	0.142	8.901	0.54243	1.00000
RegionR7	0.259	8.901	0.26146	0.88888
RegionR8	-0.311	8.901	0.23730	0.85363

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.505	8.901	0.21929	0.95476
RegenerationR2	-0.181	8.901	0.54835	0.89197
RegenerationR3	-0.252	8.901	0.41151	0.80971
RegenerationR4	-0.157	8.901	0.61148	0.91784
RegenerationR5	-0.645	8.901	0.03230	0.30013
RegenerationR6	-0.221	8.901	0.46632	0.78204
RegenerationBL	-0.079	8.901	0.76242	1.00000
RegenerationTP	-0.128	8.901	0.64968	0.98867

Genes with expression patterns similar to MligTC455_37859

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37859	22141	461.28	Mlig455_021638	Neo: Int S/G2/M Age: -	RPS16	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021638 {REF} {Length: 637} {TRANSSPLICED} {Pfam: Ribosomal protein S9/S16 [PF00380.21, score=109.3]} {Human: ENSG00000105193, RPS16, ribosomal protein S16, [RH, Score=242, Expect=3e-83]} {Mouse: ENSMUSG00000037563, Rps16, ribosomal protein S16, [RH, Score=242, Expect=2e-83]} {Dmel: FBgn0034743, RpS16, Ribosomal protein S16, [RH, Score=239, Expect=2e-82]} {Celegans: WBGene00004485, rps-16, 40S ribosomal protein S16, [RH, Score=216, Expect=2e-73]} {Smed: dd_Smed_v6_170_0_1, dd_Smed_v6_170_0_1, [RH, Score=214, Expect=1e-72]} {RNA1310_55878} {RNA815_27692}
2.	MligTC455_23198	21169	441.03	Mlig455_000351	Neo: Int S/G2/M Age: Up-Down-Up, logFC(26M/2M)=1.135	RPS9	3.231	-	0.788	-	0.723	0.760	0.960	Mlig455_000351 {REF} {Length: 734} {TRANSSPLICED} {Pfam: S4 domain [PF01479.27, score=33.9]; Ribosomal protein S4/S9 N-terminal domain [PF00163.21, score=28.0]} {Human: ENSG00000170889, RPS9, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000274950, RPS9, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000277079, AC012314.29, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000274646, RPS9, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000278270, RPS9, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000275323, AC012314.16, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000274005, AC012314.4, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000274626, AC012314.9, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000278081, AC012314.37, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000277359, AC012314.31, ribosomal protein S9, [RH, Score=303, Expect=7e-106]} {Mouse: ENSMUSG00000006333, Rps9, ribosomal protein S9, [RH, Score=303, Expect=5e-106]} {Dmel: FBgn0010408, RpS9, Ribosomal protein S9, [RH, Score=306, Expect=1e-107]} {Celegans: WBGene00004478, rps-9, 40S ribosomal protein S9, [RH, Score=306, Expect=1e-107]} {Smed: dd_Smed_v6_92_0_1, dd_Smed_v6_92_0_1, [RH, Score=320, Expect=2e-113]} {RNA1509_1161} {RNA1310_48528} {RNA815_19464}
3.	MligTC455_29462	23309	485.61	Mlig455_021960	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.690	RPL5	0.951	-	-	-	-	-	0.951	Mlig455_021960 {REF} {Length: 1113} {TRANSSPLICED} {Pfam: Ribosomal large subunit proteins 60S L5, and 50S L18 [PF17144.6, score=291.1]; Ribosomal L18 C-terminal region [PF14204.8, score=66.8]} {Human: ENSG00000122406, RPL5, ribosomal protein L5, [RH, Score=377, Expect=2e-131]} {Mouse: ENSMUSG00000058558, Rpl5, ribosomal protein L5, [RH, Score=362, Expect=9e-126]} {Dmel: FBgn0064225, RpL5, Ribosomal protein L5, [RH, Score=394, Expect=2e-138]} {Celegans: WBGene00004416, rpl-5, 60S ribosomal protein L5, [RH, Score=322, Expect=1e-110]} {Smed: dd_Smed_v6_151_0_1, dd_Smed_v6_151_0_1, [RH, Score=342, Expect=2e-118]} {RNA1509_154} {RNA1310_31746.1, RNA1509_154} {RNA1509_154, RNA815_10534.2}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_37859

22141

461.28

Mlig455_021638

Neo: Int S/G2/M

Age: -

RPS16

1.000

MligTC455_23198

21169

441.03

Mlig455_000351

Neo: Int S/G2/M

Age: Up-Down-Up, logFC(26M/2M)=1.135

RPS9

3.231

0.788

0.723

0.760

0.960

Mlig455_000351 {REF} {Length: 734} {TRANSSPLICED} {Pfam: S4 domain [PF01479.27, score=33.9]; Ribosomal protein S4/S9 N-terminal domain [PF00163.21, score=28.0]} {Human: ENSG00000170889, RPS9, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000274950, RPS9, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000277079, AC012314.29, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000274646, RPS9, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000278270, RPS9, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000275323, AC012314.16, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000274005, AC012314.4, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000274626, AC012314.9, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000278081, AC012314.37, ribosomal protein S9, [RH, Score=303, Expect=7e-106]; ENSG00000277359, AC012314.31, ribosomal protein S9, [RH, Score=303, Expect=7e-106]} {Mouse: ENSMUSG00000006333, Rps9, ribosomal protein S9, [RH, Score=303, Expect=5e-106]} {Dmel: FBgn0010408, RpS9, Ribosomal protein S9, [RH, Score=306, Expect=1e-107]} {Celegans: WBGene00004478, rps-9, 40S ribosomal protein S9, [RH, Score=306, Expect=1e-107]} {Smed: dd_Smed_v6_92_0_1, dd_Smed_v6_92_0_1, [RH, Score=320, Expect=2e-113]} {RNA1509_1161} {RNA1310_48528} {RNA815_19464}

MligTC455_29462

23309

485.61

Mlig455_021960

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.690

RPL5

0.951

Mlig455_021960 {REF} {Length: 1113} {TRANSSPLICED} {Pfam: Ribosomal large subunit proteins 60S L5, and 50S L18 [PF17144.6, score=291.1]; Ribosomal L18 C-terminal region [PF14204.8, score=66.8]} {Human: ENSG00000122406, RPL5, ribosomal protein L5, [RH, Score=377, Expect=2e-131]} {Mouse: ENSMUSG00000058558, Rpl5, ribosomal protein L5, [RH, Score=362, Expect=9e-126]} {Dmel: FBgn0064225, RpL5, Ribosomal protein L5, [RH, Score=394, Expect=2e-138]} {Celegans: WBGene00004416, rpl-5, 60S ribosomal protein L5, [RH, Score=322, Expect=1e-110]} {Smed: dd_Smed_v6_151_0_1, dd_Smed_v6_151_0_1, [RH, Score=342, Expect=2e-118]} {RNA1509_154} {RNA1310_31746.1, RNA1509_154} {RNA1509_154, RNA815_10534.2}