Data search
Results for MligTC455_37866
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_37866 | 24195 | 504.06 | Mlig455_049241 | Neo: Int S/G2/M Age: Down-Down-Up |
RPL28 | Mlig455_049241 {REF} {Length: 626} {TRANSSPLICED} {Pfam: Ribosomal L28e protein family [PF01778.19, score=95.4]} {Human: ENSG00000108107, RPL28, ribosomal protein L28, [RH, Score=117, Expect=2e-34]} {Mouse: ENSMUSG00000030432, Rpl28, ribosomal protein L28, [RH, Score=117, Expect=1e-34]} {Dmel: FBgn0035422, RpL28, Ribosomal protein L28, [RH, Score=95.1, Expect=9e-26]} {Celegans: WBGene00004442, rpl-28, 60S ribosomal protein L28, [RH, Score=50.4, Expect=8e-09]} {Smed: dd_Smed_v6_221_0_1, dd_Smed_v6_221_0_1, [Score=54.3, Expect=2e-10]} {RNA1509_1450, RNA1509_14663, RNA1509_359} {RNA1310_55482, RNA1509_1450, RNA1509_14663, RNA1509_359} {RNA1509_1450, RNA1509_14663, RNA1509_359, RNA815_27285} |
Cumulative graph for MligTC455_37866
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.567 | 9.068 | 0.10652 | 0.68364 | |
| RegionR2 | -0.228 | 9.068 | 0.43601 | 0.82567 | |
| RegionR3 | 0.3 | 9.068 | 0.23489 | 0.77670 | |
| RegionR4 | 0.135 | 9.068 | 0.62786 | 0.93640 | |
| RegionR5 | 0.173 | 9.068 | 0.48414 | 0.84779 | |
| RegionR6 | 0.19 | 9.068 | 0.44907 | 1.00000 | |
| RegionR7 | 0.23 | 9.068 | 0.35150 | 0.98724 | |
| RegionR8 | -0.233 | 9.068 | 0.39724 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.065 | 9.068 | 0.01638 | 0.53962 | |
| RegenerationR2 | -0.743 | 9.068 | 0.02322 | 0.25024 | |
| RegenerationR3 | -0.685 | 9.068 | 0.03809 | 0.34408 | |
| RegenerationR4 | -0.475 | 9.068 | 0.15969 | 0.59182 | |
| RegenerationR5 | -0.667 | 9.068 | 0.04216 | 0.33703 | |
| RegenerationR6 | -0.67 | 9.068 | 0.04307 | 0.25909 | |
| RegenerationBL | -0.381 | 9.068 | 0.18285 | 0.51230 | |
| RegenerationTP | -0.047 | 9.068 | 0.87533 | 1.00000 |
Genes with expression patterns similar to MligTC455_37866
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_37866 | 24195 | 504.06 | Mlig455_049241 | Neo: Int S/G2/M Age: Down-Down-Up |
RPL28 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049241 {REF} {Length: 626} {TRANSSPLICED} {Pfam: Ribosomal L28e protein family [PF01778.19, score=95.4]} {Human: ENSG00000108107, RPL28, ribosomal protein L28, [RH, Score=117, Expect=2e-34]} {Mouse: ENSMUSG00000030432, Rpl28, ribosomal protein L28, [RH, Score=117, Expect=1e-34]} {Dmel: FBgn0035422, RpL28, Ribosomal protein L28, [RH, Score=95.1, Expect=9e-26]} {Celegans: WBGene00004442, rpl-28, 60S ribosomal protein L28, [RH, Score=50.4, Expect=8e-09]} {Smed: dd_Smed_v6_221_0_1, dd_Smed_v6_221_0_1, [Score=54.3, Expect=2e-10]} {RNA1509_1450, RNA1509_14663, RNA1509_359} {RNA1310_55482, RNA1509_1450, RNA1509_14663, RNA1509_359} {RNA1509_1450, RNA1509_14663, RNA1509_359, RNA815_27285} |
| 2. | MligTC455_34947 | 16049 | 334.35 | Mlig455_029897 | Neo: Neoblast |
RPS11 | 2.53 | - | 0.774 | - | - | 0.973 | 0.783 | Mlig455_029897 {REF} {Length: 632} {TRANSSPLICED} {Pfam: Ribosomal protein S17 [PF00366.22, score=96.7]; Ribosomal_S17 N-terminal [PF16205.7, score=86.3]} {Human: ENSG00000142534, RPS11, ribosomal protein S11, [RH, Score=223, Expect=3e-75]} {Mouse: ENSMUSG00000003429, Rps11, ribosomal protein S11, [RH, Score=223, Expect=2e-75]} {Dmel: FBgn0033699, RpS11, Ribosomal protein S11, [RH, Score=207, Expect=2e-69]} {Celegans: WBGene00004480, rps-11, Ribosomal Protein, Small subunit, [RH, Score=191, Expect=4e-63]} {Smed: dd_Smed_v6_227_0_1, dd_Smed_v6_227_0_1, [RH, Score=204, Expect=2e-68]} {RNA1509_1776, RNA1509_3567, RNA1509_3852} {RNA1310_55835.1, RNA1509_1776, RNA1509_3567, RNA1509_3852} {RNA1509_1776, RNA1509_3567, RNA1509_3852, RNA815_25311.2} |
| 3. | MligTC455_34324 | 16021 | 333.77 | Mlig455_011318 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.193 Region-enriched R4: 4.147/0.00103 |
PLEC | 0.957 | - | - | - | 0.957 | - | - | Mlig455_011318 {REF} {Length: 664} {TRANSSPLICED} {Pfam: Plectin/S10 domain [PF03501.17, score=132.4]} {Human: ENSG00000178209, PLEC, plectin, [Score=135, Expect=8e-37]; ENSG00000124614, RPS10, ribosomal protein S10, [Score=134, Expect=4e-40]; ENSG00000270800, RPS10-NUDT3, RPS10-NUDT3 readthrough, [Score=133, Expect=2e-38]} {Mouse: ENSMUSG00000052146, Rps10, ribosomal protein S10, [RH, Score=132, Expect=3e-40]} {Dmel: FBgn0027494, RpS10a, Ribosomal protein S10a, [RH, Score=127, Expect=4e-38]} {Celegans: WBGene00004479, rps-10, Ribosomal Protein, Small subunit, [RH, Score=121, Expect=6e-36]} {Smed: dd_Smed_v6_117_0_1, dd_Smed_v6_117_0_1, [Score=132, Expect=2e-40]} {RNA1509_11204, RNA1509_382, RNA1509_439} {RNA1310_53110, RNA1509_11204, RNA1509_382, RNA1509_439} {RNA1509_11204, RNA1509_382, RNA1509_439, RNA815_28448} |
Berezikov Lab - 2020-2021 © ERIBA